| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056153
Identifier: 89056153
GI number: 89056153
Start: 3738884
End: 3739435
Strand: Direct
Name: 89056153
Synonym: Jann_3662
Alternate gene names: NA
Gene position: 3738884-3739435 (Clockwise)
Preceding gene: 89056152
Following gene: 89056155
Centisome position: 86.59
GC content: 58.88
Gene sequence:
>552_bases ATGACAAACGCGGACACCCATCCGGCTCTCTATCAGGCGCTCCGCGATGTAGAGTTGGATAATGCAGCTTTGCGGCTGAA ACTTGCGCGCCATGAATTTCGTCAAATGGAACGTGAACTGAAGTCCGAACATCCCTTCAAGCTGGATGTCTACACAACCG ACGCTCCCGTCCCGCCCGCGTTGACCATCCCGGAGATTGACGACGTGACACTGCCGCACCTGCCGGTCCCGATGGGGTCG ATCCACGCGGGGGACAAAGCGAACAATCTGCCGATCATTGGTGTCTATGACGATGGATTAACCGGCGCCACGCTGGCGGC AGCCATGTTGGGCCTGATGAACACCCAATATCACTCGCCGTTCGCCCGGTTCATTTTCCTGTGCTCGACGTTTGAAGCCG TGCCCTTTCTGGGGCGCTATGACTTTGCCTTCGACTATGTCGGAGGGGCCGCGCCTGCACCGCTACTTGGTCGCCTCAAC CGCCGTTTTGGCGCCACGCAAATCCGCTCTATCGCAACAGGGGCGGTGATCGCCGACTATGACGGCGACTAG
Upstream 100 bases:
>100_bases GGGCGGGCAGGTCCGCCCCTCCCCGCCCACAATGGCGCAACGGGGCGGCAGAGATCGCCGACATGCTGGTCGATTTGATA GATGCGAGAGGCCCTCAATC
Downstream 100 bases:
>100_bases ATCTTCACTGTCGCGATGCAGAACAGGTTCTGGGTCTCAAAATCCCGATCCTTAAGATAGGGATATTTTTGACGGATTTC GTCGGTCAGACGACCCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTNADTHPALYQALRDVELDNAALRLKLARHEFRQMERELKSEHPFKLDVYTTDAPVPPALTIPEIDDVTLPHLPVPMGS IHAGDKANNLPIIGVYDDGLTGATLAAAMLGLMNTQYHSPFARFIFLCSTFEAVPFLGRYDFAFDYVGGAAPAPLLGRLN RRFGATQIRSIATGAVIADYDGD
Sequences:
>Translated_183_residues MTNADTHPALYQALRDVELDNAALRLKLARHEFRQMERELKSEHPFKLDVYTTDAPVPPALTIPEIDDVTLPHLPVPMGS IHAGDKANNLPIIGVYDDGLTGATLAAAMLGLMNTQYHSPFARFIFLCSTFEAVPFLGRYDFAFDYVGGAAPAPLLGRLN RRFGATQIRSIATGAVIADYDGD >Mature_182_residues TNADTHPALYQALRDVELDNAALRLKLARHEFRQMERELKSEHPFKLDVYTTDAPVPPALTIPEIDDVTLPHLPVPMGSI HAGDKANNLPIIGVYDDGLTGATLAAAMLGLMNTQYHSPFARFIFLCSTFEAVPFLGRYDFAFDYVGGAAPAPLLGRLNR RFGATQIRSIATGAVIADYDGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20015; Mature: 19884
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNADTHPALYQALRDVELDNAALRLKLARHEFRQMERELKSEHPFKLDVYTTDAPVPPA CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC LTIPEIDDVTLPHLPVPMGSIHAGDKANNLPIIGVYDDGLTGATLAAAMLGLMNTQYHSP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCH FARFIFLCSTFEAVPFLGRYDFAFDYVGGAAPAPLLGRLNRRFGATQIRSIATGAVIADY HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCEEECC DGD CCC >Mature Secondary Structure TNADTHPALYQALRDVELDNAALRLKLARHEFRQMERELKSEHPFKLDVYTTDAPVPPA CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC LTIPEIDDVTLPHLPVPMGSIHAGDKANNLPIIGVYDDGLTGATLAAAMLGLMNTQYHSP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCH FARFIFLCSTFEAVPFLGRYDFAFDYVGGAAPAPLLGRLNRRFGATQIRSIATGAVIADY HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCEEECC DGD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA