Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056152

Identifier: 89056152

GI number: 89056152

Start: 3737214

End: 3738887

Strand: Direct

Name: 89056152

Synonym: Jann_3661

Alternate gene names: NA

Gene position: 3737214-3738887 (Clockwise)

Preceding gene: 89056151

Following gene: 89056153

Centisome position: 86.55

GC content: 62.25

Gene sequence:

>1674_bases
ATGACCGCTCAATGCCAATGGCTCGCCGTCGCGTCAGATCCGCTGTCGCAGGTGATCACCGAGCATCCGGATTTTGCGGC
CCGTGATCATCTGGCCGTGCTCTCGCAAACGGCTGCTCTGATCCATTGGCCCGCCATCGAAGCCCATGGGGGCGAGGTGT
CGATCATTTTGCGTCGGAGTGGTCCGGGCGGCGATACGGAATGGGCCGATCATCTGGACCTTTTGCGCCAGCTGCTCAGG
CAATCCGGCAAGCGGGTCACGCTTCTGGCCCTGACCAGGGATGCGACGGACGCTCTGTCAGATGAAATGGGTCAGGCCGT
GATCCACCTGGCGCCCCTGCCTTATGCCTTCCGAGGGGATCGGTCTCTGAGGGTGTCACGGGCCAGCGGTCCCCTTCAAA
TTCTGCGCGATCAATCTGATCCACTACCCGCGTGGCCGTACAATCTGGGGCGTTTGCGTCGGGTTGCCGTGATGAACGCC
GATGATGGGGATGCCGACCTGAGCGACGTTCTGCAATTCGCGAATGGGGCGTCGCAAGCCGAGACACCGCACCCCAAGCG
GGCTCCGGTCGTTGTTGTGGTGGTCCCAAACGGGTTCGGGTTGGGGCATGTGACGCGCATGCTAGCCGTCGCGCGCCACA
TGAAAGCGCAGCACGATGCGCGCGTGATCTTCTGGTGCTTTTCCCGCGCGGCTGGCATCATATCCGAGTTCGGGTTTGAG
GTCGTATCACGGCAAACGGCGCGACACATCGGCGCGAACCCCGATGACTGGCAAAGGTGGGAAACGGCAGAGTTTGCCGC
GGTGCTTGCACAGCTTAAACCGGACCTTGTGGTGCAGGACGCGGCCACGTTCGACGACTTCGTCACCGAGGCATTGGTGC
GCCCTAATGTTGGCAGTGCCAGGCTGGCGCTTGTTCGACGCGGCTTGTGGCAAAAGCACATCCTCGGAACAAATCCGCTG
ACCTCCGAAGACCTTGCCGACATGGTGGTGGAGCCCGGAGATCTGGCCGCACCAGCCGACCAGGGGATCACACGGGGACG
CGCGACGAAGCGCAGTTCATTCGCCACCATGGCTCTCGCGGCGCCGGTGACGTTGACGCGACCAGAGGACATGTTGGACC
GCAAGCGCGCCCGGAAGGCTCTTGGACTGGGATGGGGTCGCCATTGCCTGGTCACGCTGGGGGGAGATGCCTTCAACGAT
TGGAGTCACCTTGTCCGCCAAATCGTGAATGCCGCAGAGGCTGCGGGGGTGCGGCTTGTCTGGGCGCGATCCCCCCTGGC
CGCGCCTGAAGTTGAGATAGGTGCCAATTCCGGGGTGATATCCCGCAGCTTCTATCCGTTAGCCCCCTATCTTGCCGCGT
TCGATGGAGTTGTCTCTTCGGCGGGGTACAACAGCTTCCATGAGCTTATTCAGTGCTATGATCGGCCGGTCCTTTTTGCA
CCCCGCCAGCACTCTGCGCTGGATGATCAGGTTGCCCGCGCGCGTTTTGCGGACACTCAAGAGTGGGCAAAGCAAGTAAG
CACGGACCAGGCCGACGATGAGCCCATTCGATCATTCATGGCAGAGGTGCGGGCGGGCAGGTCCGCCCCTCCCCGCCCAC
AATGGCGCAACGGGGCGGCAGAGATCGCCGACATGCTGGTCGATTTGATAGATGCGAGAGGCCCTCAATCATGA

Upstream 100 bases:

>100_bases
CCTTGGCCGCCGATTATCGGCCGCGTGTGCAGTTCATCCTGGACCGGTATTCGAATGCCGCGTTGGTCGACCGCCTGCTT
GATCTTTACGGTGCAACACC

Downstream 100 bases:

>100_bases
CAAACGCGGACACCCATCCGGCTCTCTATCAGGCGCTCCGCGATGTAGAGTTGGATAATGCAGCTTTGCGGCTGAAACTT
GCGCGCCATGAATTTCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Antifreeze Protein Type I; Glycosyltransferase Protein; UDP-N-AcetylglucosamineLPS N-Acetylglucosamine Transferase

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MTAQCQWLAVASDPLSQVITEHPDFAARDHLAVLSQTAALIHWPAIEAHGGEVSIILRRSGPGGDTEWADHLDLLRQLLR
QSGKRVTLLALTRDATDALSDEMGQAVIHLAPLPYAFRGDRSLRVSRASGPLQILRDQSDPLPAWPYNLGRLRRVAVMNA
DDGDADLSDVLQFANGASQAETPHPKRAPVVVVVVPNGFGLGHVTRMLAVARHMKAQHDARVIFWCFSRAAGIISEFGFE
VVSRQTARHIGANPDDWQRWETAEFAAVLAQLKPDLVVQDAATFDDFVTEALVRPNVGSARLALVRRGLWQKHILGTNPL
TSEDLADMVVEPGDLAAPADQGITRGRATKRSSFATMALAAPVTLTRPEDMLDRKRARKALGLGWGRHCLVTLGGDAFND
WSHLVRQIVNAAEAAGVRLVWARSPLAAPEVEIGANSGVISRSFYPLAPYLAAFDGVVSSAGYNSFHELIQCYDRPVLFA
PRQHSALDDQVARARFADTQEWAKQVSTDQADDEPIRSFMAEVRAGRSAPPRPQWRNGAAEIADMLVDLIDARGPQS

Sequences:

>Translated_557_residues
MTAQCQWLAVASDPLSQVITEHPDFAARDHLAVLSQTAALIHWPAIEAHGGEVSIILRRSGPGGDTEWADHLDLLRQLLR
QSGKRVTLLALTRDATDALSDEMGQAVIHLAPLPYAFRGDRSLRVSRASGPLQILRDQSDPLPAWPYNLGRLRRVAVMNA
DDGDADLSDVLQFANGASQAETPHPKRAPVVVVVVPNGFGLGHVTRMLAVARHMKAQHDARVIFWCFSRAAGIISEFGFE
VVSRQTARHIGANPDDWQRWETAEFAAVLAQLKPDLVVQDAATFDDFVTEALVRPNVGSARLALVRRGLWQKHILGTNPL
TSEDLADMVVEPGDLAAPADQGITRGRATKRSSFATMALAAPVTLTRPEDMLDRKRARKALGLGWGRHCLVTLGGDAFND
WSHLVRQIVNAAEAAGVRLVWARSPLAAPEVEIGANSGVISRSFYPLAPYLAAFDGVVSSAGYNSFHELIQCYDRPVLFA
PRQHSALDDQVARARFADTQEWAKQVSTDQADDEPIRSFMAEVRAGRSAPPRPQWRNGAAEIADMLVDLIDARGPQS
>Mature_556_residues
TAQCQWLAVASDPLSQVITEHPDFAARDHLAVLSQTAALIHWPAIEAHGGEVSIILRRSGPGGDTEWADHLDLLRQLLRQ
SGKRVTLLALTRDATDALSDEMGQAVIHLAPLPYAFRGDRSLRVSRASGPLQILRDQSDPLPAWPYNLGRLRRVAVMNAD
DGDADLSDVLQFANGASQAETPHPKRAPVVVVVVPNGFGLGHVTRMLAVARHMKAQHDARVIFWCFSRAAGIISEFGFEV
VSRQTARHIGANPDDWQRWETAEFAAVLAQLKPDLVVQDAATFDDFVTEALVRPNVGSARLALVRRGLWQKHILGTNPLT
SEDLADMVVEPGDLAAPADQGITRGRATKRSSFATMALAAPVTLTRPEDMLDRKRARKALGLGWGRHCLVTLGGDAFNDW
SHLVRQIVNAAEAAGVRLVWARSPLAAPEVEIGANSGVISRSFYPLAPYLAAFDGVVSSAGYNSFHELIQCYDRPVLFAP
RQHSALDDQVARARFADTQEWAKQVSTDQADDEPIRSFMAEVRAGRSAPPRPQWRNGAAEIADMLVDLIDARGPQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60778; Mature: 60647

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQCQWLAVASDPLSQVITEHPDFAARDHLAVLSQTAALIHWPAIEAHGGEVSIILRRS
CCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCEECCCCEEEEEEEEC
GPGGDTEWADHLDLLRQLLRQSGKRVTLLALTRDATDALSDEMGQAVIHLAPLPYAFRGD
CCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHCCCEEEECCCCCEECCC
RSLRVSRASGPLQILRDQSDPLPAWPYNLGRLRRVAVMNADDGDADLSDVLQFANGASQA
CCEEEECCCCCHHHHCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHCCCCCC
ETPHPKRAPVVVVVVPNGFGLGHVTRMLAVARHMKAQHDARVIFWCFSRAAGIISEFGFE
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH
VVSRQTARHIGANPDDWQRWETAEFAAVLAQLKPDLVVQDAATFDDFVTEALVRPNVGSA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCCHH
RLALVRRGLWQKHILGTNPLTSEDLADMVVEPGDLAAPADQGITRGRATKRSSFATMALA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHCCHHCCCHHHHHHHHHHHC
APVTLTRPEDMLDRKRARKALGLGWGRHCLVTLGGDAFNDWSHLVRQIVNAAEAAGVRLV
CCEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEE
WARSPLAAPEVEIGANSGVISRSFYPLAPYLAAFDGVVSSAGYNSFHELIQCYDRPVLFA
EECCCCCCCCEEECCCCCEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEC
PRQHSALDDQVARARFADTQEWAKQVSTDQADDEPIRSFMAEVRAGRSAPPRPQWRNGAA
CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH
EIADMLVDLIDARGPQS
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TAQCQWLAVASDPLSQVITEHPDFAARDHLAVLSQTAALIHWPAIEAHGGEVSIILRRS
CCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCEECCCCEEEEEEEEC
GPGGDTEWADHLDLLRQLLRQSGKRVTLLALTRDATDALSDEMGQAVIHLAPLPYAFRGD
CCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHCCCEEEECCCCCEECCC
RSLRVSRASGPLQILRDQSDPLPAWPYNLGRLRRVAVMNADDGDADLSDVLQFANGASQA
CCEEEECCCCCHHHHCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHCCCCCC
ETPHPKRAPVVVVVVPNGFGLGHVTRMLAVARHMKAQHDARVIFWCFSRAAGIISEFGFE
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH
VVSRQTARHIGANPDDWQRWETAEFAAVLAQLKPDLVVQDAATFDDFVTEALVRPNVGSA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCCHH
RLALVRRGLWQKHILGTNPLTSEDLADMVVEPGDLAAPADQGITRGRATKRSSFATMALA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHCCHHCCCHHHHHHHHHHHC
APVTLTRPEDMLDRKRARKALGLGWGRHCLVTLGGDAFNDWSHLVRQIVNAAEAAGVRLV
CCEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEE
WARSPLAAPEVEIGANSGVISRSFYPLAPYLAAFDGVVSSAGYNSFHELIQCYDRPVLFA
EECCCCCCCCEEECCCCCEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEC
PRQHSALDDQVARARFADTQEWAKQVSTDQADDEPIRSFMAEVRAGRSAPPRPQWRNGAA
CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH
EIADMLVDLIDARGPQS
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA