| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is nadD
Identifier: 89056120
GI number: 89056120
Start: 3703649
End: 3704299
Strand: Direct
Name: nadD
Synonym: Jann_3629
Alternate gene names: 89056120
Gene position: 3703649-3704299 (Clockwise)
Preceding gene: 89056115
Following gene: 89056122
Centisome position: 85.77
GC content: 64.36
Gene sequence:
>651_bases TTGACAGCCTGCCCCCTCCCCCCCCATCAAAGCGCCCGAGAGGGGCTGGACTTGCGTCACACGCTGCCATTTGCAATGCC AGGCCAGACTGTCGGCCTGTTCGGAGGATCATTCGATCCGCCGCACAAAGGCCATGTGCACGTGAGCCGTGAAGCCCTGA AGCGGTATGGTCTGGACCGCGTGTGGTGGCTGGTATCGCCGGGCAATCCGCTCAAGGCACGGGGGCCCGCAGCACTGGAC CGCAGATTGCAGGCGGCACGCGCACTGGTGCACCATCCCAGCGTCGAGGTCACGGACATCGAGGCCCATCTTGGCACGCG CTATACAGCACAGACGATTGAGAGGTTGCAAACGCTCTACCCCGGCGTTCGGTTCGTCTGGCTGATGGGGGCCGATAACC TCGCGCAGTTCCATCGGTGGCAGCGGTGGGAATGGATCATGCGATCTGTTCCGGTGGGGGTGCTGGCCCGGCCCGGAGAG AGGATATCGGCCAGAACATCGGTTGCGGCACAACGGTTCAGAGATGCCAAGATGCCCGCCAGCGCGGCGCAGCTATTGGG CCGCTCGGACGCGCCAGCCTGGTGCTTTCTCAACGTGCCGATGCTGGACGTCTCAAGCTCGGACATCCGCGCCCGGGGAG AATGGGGTTAG
Upstream 100 bases:
>100_bases CAAATGCCCCGTTAACGCGTCCGGCACTCGCCTGAAAATTTGTCGCGGATTTTAGTTAGATTTGCCGGAACTGGGTTCAG GCGGCGCGGGGCATGGTAGA
Downstream 100 bases:
>100_bases GCGGCGCGTCGCACCCTTCATCTCCTCCGGACCGCAAGAGATGCAAAGCCCGACACCAGCAAAAGCGCAATGCCAGTCAA GGCCCAGATGTCCGGTACCG
Product: nicotinic acid mononucleotide adenylyltransferase
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase [H]
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MTACPLPPHQSAREGLDLRHTLPFAMPGQTVGLFGGSFDPPHKGHVHVSREALKRYGLDRVWWLVSPGNPLKARGPAALD RRLQAARALVHHPSVEVTDIEAHLGTRYTAQTIERLQTLYPGVRFVWLMGADNLAQFHRWQRWEWIMRSVPVGVLARPGE RISARTSVAAQRFRDAKMPASAAQLLGRSDAPAWCFLNVPMLDVSSSDIRARGEWG
Sequences:
>Translated_216_residues MTACPLPPHQSAREGLDLRHTLPFAMPGQTVGLFGGSFDPPHKGHVHVSREALKRYGLDRVWWLVSPGNPLKARGPAALD RRLQAARALVHHPSVEVTDIEAHLGTRYTAQTIERLQTLYPGVRFVWLMGADNLAQFHRWQRWEWIMRSVPVGVLARPGE RISARTSVAAQRFRDAKMPASAAQLLGRSDAPAWCFLNVPMLDVSSSDIRARGEWG >Mature_215_residues TACPLPPHQSAREGLDLRHTLPFAMPGQTVGLFGGSFDPPHKGHVHVSREALKRYGLDRVWWLVSPGNPLKARGPAALDR RLQAARALVHHPSVEVTDIEAHLGTRYTAQTIERLQTLYPGVRFVWLMGADNLAQFHRWQRWEWIMRSVPVGVLARPGER ISARTSVAAQRFRDAKMPASAAQLLGRSDAPAWCFLNVPMLDVSSSDIRARGEWG
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) [H]
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.18 [H]
Molecular weight: Translated: 24121; Mature: 23990
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTACPLPPHQSAREGLDLRHTLPFAMPGQTVGLFGGSFDPPHKGHVHVSREALKRYGLDR CCCCCCCCCCHHHHCCCCHHCCCCCCCCCEEEECCCCCCCCCCCCEEECHHHHHHCCCCE VWWLVSPGNPLKARGPAALDRRLQAARALVHHPSVEVTDIEAHLGTRYTAQTIERLQTLY EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHC PGVRFVWLMGADNLAQFHRWQRWEWIMRSVPVGVLARPGERISARTSVAAQRFRDAKMPA CCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCH SAAQLLGRSDAPAWCFLNVPMLDVSSSDIRARGEWG HHHHHHCCCCCCEEEEEECCEEECCCCCCCCCCCCC >Mature Secondary Structure TACPLPPHQSAREGLDLRHTLPFAMPGQTVGLFGGSFDPPHKGHVHVSREALKRYGLDR CCCCCCCCCHHHHCCCCHHCCCCCCCCCEEEECCCCCCCCCCCCEEECHHHHHHCCCCE VWWLVSPGNPLKARGPAALDRRLQAARALVHHPSVEVTDIEAHLGTRYTAQTIERLQTLY EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHC PGVRFVWLMGADNLAQFHRWQRWEWIMRSVPVGVLARPGERISARTSVAAQRFRDAKMPA CCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCH SAAQLLGRSDAPAWCFLNVPMLDVSSSDIRARGEWG HHHHHHCCCCCCEEEEEECCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA