Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056096

Identifier: 89056096

GI number: 89056096

Start: 3681567

End: 3682145

Strand: Direct

Name: 89056096

Synonym: Jann_3605

Alternate gene names: NA

Gene position: 3681567-3682145 (Clockwise)

Preceding gene: 89056095

Following gene: 89056097

Centisome position: 85.26

GC content: 63.9

Gene sequence:

>579_bases
ATGCCCAATGACATGTCCCCCTTCCCCGCGTCTGACCTTGCCGCCACCCTAACGGCGCGAACACAACGATATTGCGCCCG
GGCCAGTGCACTGGCCGTTGATCCTGCCTTGACACAGGTCGGTGCGGTCAACGCATTGGATCATCTGTCGAGCCTTCAAG
AGGACATCCGCGCCACACGATTGCACCAAAGCGCTGCCATCCGTGCCGAGCGTCGGCAGATGGAAGCACCGTTCAAGACG
CTTGAGACCGACTTGGCAAACGCGCGCAGCGCGCTGTCGGAGGCACTTCTGCGCGCAGCACCCGATCCGACGTCCGGCTA
TGGCTCCGTCGCGCAAAAGACCGTCTGCACCACGCCTGACGGGCCATCAACAGACGTCAGCCTGACCTCCGGCGCACCGC
AGGCGGTATCCGCCAGTCGCGCGCTCCTCGATCTGGAGGCGCTCCGCCCGTATCTCAGCGACACGGCCCTGCGCGATGCG
CTTGAACGATACACCAAAGACGGCGGCAACCATGATGTTGCGGGCGTGGCCTACGCGGTTCTACCCGCTTCAGCCCAACT
GCCCTGCGCGATCTACTAA

Upstream 100 bases:

>100_bases
CGCGTCGGAGGTGGAGGCCTTCCGCGCCTGTGGCCAGGTTCCTTCGGCTTGAAAGGACATTGGTAACCGACCGTTAACGG
GAATCGGGTGAGCCTTGGAT

Downstream 100 bases:

>100_bases
CCGGTCTCATCTAACAAGAGGTCTGAACCTTGTGCAGTGGCGTTCTGTCGACCGGAGACACTCGCCTTCGATTGGAGTGG
TCGGGCACCCAACCCACAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MPNDMSPFPASDLAATLTARTQRYCARASALAVDPALTQVGAVNALDHLSSLQEDIRATRLHQSAAIRAERRQMEAPFKT
LETDLANARSALSEALLRAAPDPTSGYGSVAQKTVCTTPDGPSTDVSLTSGAPQAVSASRALLDLEALRPYLSDTALRDA
LERYTKDGGNHDVAGVAYAVLPASAQLPCAIY

Sequences:

>Translated_192_residues
MPNDMSPFPASDLAATLTARTQRYCARASALAVDPALTQVGAVNALDHLSSLQEDIRATRLHQSAAIRAERRQMEAPFKT
LETDLANARSALSEALLRAAPDPTSGYGSVAQKTVCTTPDGPSTDVSLTSGAPQAVSASRALLDLEALRPYLSDTALRDA
LERYTKDGGNHDVAGVAYAVLPASAQLPCAIY
>Mature_191_residues
PNDMSPFPASDLAATLTARTQRYCARASALAVDPALTQVGAVNALDHLSSLQEDIRATRLHQSAAIRAERRQMEAPFKTL
ETDLANARSALSEALLRAAPDPTSGYGSVAQKTVCTTPDGPSTDVSLTSGAPQAVSASRALLDLEALRPYLSDTALRDAL
ERYTKDGGNHDVAGVAYAVLPASAQLPCAIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20182; Mature: 20051

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNDMSPFPASDLAATLTARTQRYCARASALAVDPALTQVGAVNALDHLSSLQEDIRATR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LHQSAAIRAERRQMEAPFKTLETDLANARSALSEALLRAAPDPTSGYGSVAQKTVCTTPD
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCEECCCCC
GPSTDVSLTSGAPQAVSASRALLDLEALRPYLSDTALRDALERYTKDGGNHDVAGVAYAV
CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LPASAQLPCAIY
HCCCCCCCEECC
>Mature Secondary Structure 
PNDMSPFPASDLAATLTARTQRYCARASALAVDPALTQVGAVNALDHLSSLQEDIRATR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LHQSAAIRAERRQMEAPFKTLETDLANARSALSEALLRAAPDPTSGYGSVAQKTVCTTPD
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCEECCCCC
GPSTDVSLTSGAPQAVSASRALLDLEALRPYLSDTALRDALERYTKDGGNHDVAGVAYAV
CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LPASAQLPCAIY
HCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA