Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056095

Identifier: 89056095

GI number: 89056095

Start: 3680919

End: 3681518

Strand: Direct

Name: 89056095

Synonym: Jann_3604

Alternate gene names: NA

Gene position: 3680919-3681518 (Clockwise)

Preceding gene: 89056093

Following gene: 89056096

Centisome position: 85.25

GC content: 62.17

Gene sequence:

>600_bases
TTGCATGTGCTCCCTCTGGATCAGATTTCAGGATGGCAAATCTGTGGCATCCTTGGGCAAAAGCTGTGCCAGACCCACTC
GGGCCAGAGTTTTGGCCCACCGGCGGATCACCGGCAGGGGCCGGACACTCGCCATTCTGCCGCGCCGGTCTACCTGTCTG
CCATGAGAAAACTGTCTACTGCTTTGATCCTCGTGCTCTCTTCCGGTCCAGTCGCGGCGTGGGACGCGGGTGTCGACGGC
CCGCTTTGCACGCTGACTTATGAGGAGAACGCATCATCGGTGCGGCTCACCTATGATCCCGGCGTGCCGCTCTACACGAT
CTCGGTCACTGGTGCAGAAGCCTGGGACGTGGCCCCGCAATTCAGCATTACCTTTGACGGTCCCCGGCCCAACACGATCC
GCACGGACCGGCATGTATTGTCGTCGGATCTCAGGACCTTAAGCGTCTCGGATCGGGGCTTCGGGAACGTGCTGGACGGG
TTGCAGTTCAATGCGACCGCCACGGCCACCAGCGGTGCCACAGTGATCCTGATCTCCCTTGACGGCGCCGCGTCGGAGGT
GGAGGCCTTCCGCGCCTGTGGCCAGGTTCCTTCGGCTTGA

Upstream 100 bases:

>100_bases
CGGAAGGGTCAAGCTTGGCCCGCCGATCACGAAGCTTCCACCGGCGGAGGCGAGAGAGGTCAGAAGTAGAGACAAGGGAA
GCTGCATCAGATCGTCCTGG

Downstream 100 bases:

>100_bases
AAGGACATTGGTAACCGACCGTTAACGGGAATCGGGTGAGCCTTGGATATGCCCAATGACATGTCCCCCTTCCCCGCGTC
TGACCTTGCCGCCACCCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MHVLPLDQISGWQICGILGQKLCQTHSGQSFGPPADHRQGPDTRHSAAPVYLSAMRKLSTALILVLSSGPVAAWDAGVDG
PLCTLTYEENASSVRLTYDPGVPLYTISVTGAEAWDVAPQFSITFDGPRPNTIRTDRHVLSSDLRTLSVSDRGFGNVLDG
LQFNATATATSGATVILISLDGAASEVEAFRACGQVPSA

Sequences:

>Translated_199_residues
MHVLPLDQISGWQICGILGQKLCQTHSGQSFGPPADHRQGPDTRHSAAPVYLSAMRKLSTALILVLSSGPVAAWDAGVDG
PLCTLTYEENASSVRLTYDPGVPLYTISVTGAEAWDVAPQFSITFDGPRPNTIRTDRHVLSSDLRTLSVSDRGFGNVLDG
LQFNATATATSGATVILISLDGAASEVEAFRACGQVPSA
>Mature_199_residues
MHVLPLDQISGWQICGILGQKLCQTHSGQSFGPPADHRQGPDTRHSAAPVYLSAMRKLSTALILVLSSGPVAAWDAGVDG
PLCTLTYEENASSVRLTYDPGVPLYTISVTGAEAWDVAPQFSITFDGPRPNTIRTDRHVLSSDLRTLSVSDRGFGNVLDG
LQFNATATATSGATVILISLDGAASEVEAFRACGQVPSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20953; Mature: 20953

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVLPLDQISGWQICGILGQKLCQTHSGQSFGPPADHRQGPDTRHSAAPVYLSAMRKLST
CCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHE
ALILVLSSGPVAAWDAGVDGPLCTLTYEENASSVRLTYDPGVPLYTISVTGAEAWDVAPQ
EEEEEECCCCCEEECCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCC
FSITFDGPRPNTIRTDRHVLSSDLRTLSVSDRGFGNVLDGLQFNATATATSGATVILISL
EEEEECCCCCCCCCCHHHHHHCCCEEEEECCCCCCHHHCCEEECCEEECCCCCEEEEEEE
DGAASEVEAFRACGQVPSA
CCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHVLPLDQISGWQICGILGQKLCQTHSGQSFGPPADHRQGPDTRHSAAPVYLSAMRKLST
CCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHE
ALILVLSSGPVAAWDAGVDGPLCTLTYEENASSVRLTYDPGVPLYTISVTGAEAWDVAPQ
EEEEEECCCCCEEECCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCC
FSITFDGPRPNTIRTDRHVLSSDLRTLSVSDRGFGNVLDGLQFNATATATSGATVILISL
EEEEECCCCCCCCCCHHHHHHCCCEEEEECCCCCCHHHCCEEECCEEECCCCCEEEEEEE
DGAASEVEAFRACGQVPSA
CCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA