| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055943
Identifier: 89055943
GI number: 89055943
Start: 3500915
End: 3501211
Strand: Direct
Name: 89055943
Synonym: Jann_3452
Alternate gene names: NA
Gene position: 3500915-3501211 (Clockwise)
Preceding gene: 89055942
Following gene: 89055944
Centisome position: 81.08
GC content: 60.61
Gene sequence:
>297_bases ATGGCGCGCTCCACGCTAAGCCCCGTCAGCACGCACCTTGACCTCACCCATTGCATACACCGACGTATCTCCATGATCGA AACCAAAATCCGCAAAGTCGGCAATTCAGCCGTCGTCACGCTTTCGTCCGAGATGCTCGCCGTGCTCGATGCCAAACCCG GCGACGCTTTGTTCGTGACCCGCTCCGATGACGGGGCGCTCAAACTCATGGCCCATGACCCCGAGCTTCAAGCGGCTCTC GCAGCCGCCGAAGAGGTGATGGACGAGAACCGGGATCTCCTTCAGGCGCTTGCGTGA
Upstream 100 bases:
>100_bases TCTGGCCACGGCTTGGTGCTCCGCCCGTTAAGTCCCTCAAGCTTGGCCACTATAAACTGCCAGAGAACACCTCGGCGGAT CGCCGATCCAAGGCCCGACG
Downstream 100 bases:
>100_bases GCTGGGTCTGGGTCCCCGTCCAGACCCTCTACGTCGTCCATGACCGCCAGATCGCCCGCCACGGTGGTGCGCCGGGGGTC AGAGACATTGCGCGTCTGGC
Product: transcriptional regulator/antitoxin, MazE
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MARSTLSPVSTHLDLTHCIHRRISMIETKIRKVGNSAVVTLSSEMLAVLDAKPGDALFVTRSDDGALKLMAHDPELQAAL AAAEEVMDENRDLLQALA
Sequences:
>Translated_98_residues MARSTLSPVSTHLDLTHCIHRRISMIETKIRKVGNSAVVTLSSEMLAVLDAKPGDALFVTRSDDGALKLMAHDPELQAAL AAAEEVMDENRDLLQALA >Mature_97_residues ARSTLSPVSTHLDLTHCIHRRISMIETKIRKVGNSAVVTLSSEMLAVLDAKPGDALFVTRSDDGALKLMAHDPELQAALA AAEEVMDENRDLLQALA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10594; Mature: 10463
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSTLSPVSTHLDLTHCIHRRISMIETKIRKVGNSAVVTLSSEMLAVLDAKPGDALFVT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCEEEEE RSDDGALKLMAHDPELQAALAAAEEVMDENRDLLQALA ECCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHCC >Mature Secondary Structure ARSTLSPVSTHLDLTHCIHRRISMIETKIRKVGNSAVVTLSSEMLAVLDAKPGDALFVT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCEEEEE RSDDGALKLMAHDPELQAALAAAEEVMDENRDLLQALA ECCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA