| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055944
Identifier: 89055944
GI number: 89055944
Start: 3501208
End: 3501582
Strand: Direct
Name: 89055944
Synonym: Jann_3453
Alternate gene names: NA
Gene position: 3501208-3501582 (Clockwise)
Preceding gene: 89055943
Following gene: 89055945
Centisome position: 81.08
GC content: 66.4
Gene sequence:
>375_bases GTGAGCTGGGTCTGGGTCCCCGTCCAGACCCTCTACGTCGTCCATGACCGCCAGATCGCCCGCCACGGTGGTGCGCCGGG GGTCAGAGACATTGCGCGTCTGGCAACGGCCTGCGCCCCTACGCAATCCCACGGCGCCTCCGATATCCAAGACATCGCCG CCGCCTATGCCTTCGGGATTGCGAAAGCCCATGCCTTCGTCGATGGCAACAAACGCACCGCCTTTGTGGCCTGCGCCACC TTCCTGCGCCTCAACGGCTGGTCCCTGCGCCCGGACCCGGCGGAGGGTGTTCGGATGATGGAGGATCTGGCGGCCTCCCG CGTCTCGGACGCCGAGTTTGCCGAGTGGCTCAAGCGGCAAAGCAACCCACTTTGA
Upstream 100 bases:
>100_bases GGGCGCTCAAACTCATGGCCCATGACCCCGAGCTTCAAGCGGCTCTCGCAGCCGCCGAAGAGGTGATGGACGAGAACCGG GATCTCCTTCAGGCGCTTGC
Downstream 100 bases:
>100_bases CCCACCACCGCGTGGGGGCAAAAGGTTAACAAGTTCGATTAGCCTACCTTTTCAGTAGCTTACACCCCTGCTCAAGCTTG AGCAGGCCCGCTCACCTTCC
Product: death-on-curing protein
Products: NA
Alternate protein names: Death-On-Curing Protein; Death On Curing Protein; Death ON Curing Protein; Death On Curing xin Protein Doc; Doc Protein; Addiction Module xin; Prophage Maintenance System Killer Protein
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSWVWVPVQTLYVVHDRQIARHGGAPGVRDIARLATACAPTQSHGASDIQDIAAAYAFGIAKAHAFVDGNKRTAFVACAT FLRLNGWSLRPDPAEGVRMMEDLAASRVSDAEFAEWLKRQSNPL
Sequences:
>Translated_124_residues MSWVWVPVQTLYVVHDRQIARHGGAPGVRDIARLATACAPTQSHGASDIQDIAAAYAFGIAKAHAFVDGNKRTAFVACAT FLRLNGWSLRPDPAEGVRMMEDLAASRVSDAEFAEWLKRQSNPL >Mature_123_residues SWVWVPVQTLYVVHDRQIARHGGAPGVRDIARLATACAPTQSHGASDIQDIAAAYAFGIAKAHAFVDGNKRTAFVACATF LRLNGWSLRPDPAEGVRMMEDLAASRVSDAEFAEWLKRQSNPL
Specific function: Unknown
COG id: COG3654
COG function: function code R; Prophage maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13520; Mature: 13389
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWVWVPVQTLYVVHDRQIARHGGAPGVRDIARLATACAPTQSHGASDIQDIAAAYAFGI CCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH AKAHAFVDGNKRTAFVACATFLRLNGWSLRPDPAEGVRMMEDLAASRVSDAEFAEWLKRQ HHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH SNPL CCCC >Mature Secondary Structure SWVWVPVQTLYVVHDRQIARHGGAPGVRDIARLATACAPTQSHGASDIQDIAAAYAFGI CEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH AKAHAFVDGNKRTAFVACATFLRLNGWSLRPDPAEGVRMMEDLAASRVSDAEFAEWLKRQ HHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH SNPL CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA