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The map label for this gene is 89055939

Identifier: 89055939

GI number: 89055939

Start: 3495122

End: 3495703

Strand: Direct

Name: 89055939

Synonym: Jann_3448

Alternate gene names: NA

Gene position: 3495122-3495703 (Clockwise)

Preceding gene: 89055938

Following gene: 89055940

Centisome position: 80.94

GC content: 67.53

Gene sequence:

>582_bases
GTGGCTGATACGACCCCACCTAAGTTGACCCCGGCTAAACTGAGCGCAGCCAAACTGACCGCCAGGACCCCGTTCGCGGG
GCTGCTTCCGATCTCGGAGGGCGCCACCACGCTGTCAGAGGTGACGCACGACGCGATCACGTGGATCTCACCGGCCAAGG
GCAAGATGGCCACCGTATCCAAGGCCCTGGCCAAGCAGACGGGCGCGTCGTTTCCCGATCCCGGCCGGATTGAAGGCGCT
GCCGTCTGGAGCGGCCCGGGCCAGGCTTTGCTCCTCGGGCCGACGTTCAAGCCGATCAAGGGCGCGGCGGCCTCTGACCA
GAGCAGCGCCTGGGCCTGCTGCGCGCTGAACGGTCCCGATGCGCGCGCCGTGCTGGCCCGGCTGGTGCCCATCGACCTGC
GGCCCGAGAGCTTCGCGGAAGGTCACGTCGCCCGCACCCTTCTGGGCCACATGAATTGCGTGCTGCTGCACCGAAGCGCA
GATCGCTATGAGATCATGGTCTTCCGCTCGATGGCCACCACCGCCGCCCATGAGATCGCGGAGGCCATGGCACTGGTCGC
GGCCCGGTCCCGACATCTTTAA

Upstream 100 bases:

>100_bases
GTCGGGCATCATATGATGATGGTCGACCACCTGCGGGGCGTCACGGCGGCGGTCGAAATCTGTGATCCGGTCTTCTTTGA
CCCCGACGGAGGGCGCGCCC

Downstream 100 bases:

>100_bases
CCAAAATCGGTTAAGATCGCCCCAAATCGCGCAAGCGGTTGCGGCGCAAGGACAAACTCGTTGGCCCGCCGATGAGGGGC
GCGAATTCACCTCGGCCCCA

Product: sarcosine oxidase subunit gamma

Products: NA

Alternate protein names: Sarcosine Oxidase; Sarcosine Oxidase Gamma Subunit Family Protein; Sarcosine Oxidase Gamma Subunit Family

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MADTTPPKLTPAKLSAAKLTARTPFAGLLPISEGATTLSEVTHDAITWISPAKGKMATVSKALAKQTGASFPDPGRIEGA
AVWSGPGQALLLGPTFKPIKGAAASDQSSAWACCALNGPDARAVLARLVPIDLRPESFAEGHVARTLLGHMNCVLLHRSA
DRYEIMVFRSMATTAAHEIAEAMALVAARSRHL

Sequences:

>Translated_193_residues
MADTTPPKLTPAKLSAAKLTARTPFAGLLPISEGATTLSEVTHDAITWISPAKGKMATVSKALAKQTGASFPDPGRIEGA
AVWSGPGQALLLGPTFKPIKGAAASDQSSAWACCALNGPDARAVLARLVPIDLRPESFAEGHVARTLLGHMNCVLLHRSA
DRYEIMVFRSMATTAAHEIAEAMALVAARSRHL
>Mature_192_residues
ADTTPPKLTPAKLSAAKLTARTPFAGLLPISEGATTLSEVTHDAITWISPAKGKMATVSKALAKQTGASFPDPGRIEGAA
VWSGPGQALLLGPTFKPIKGAAASDQSSAWACCALNGPDARAVLARLVPIDLRPESFAEGHVARTLLGHMNCVLLHRSAD
RYEIMVFRSMATTAAHEIAEAMALVAARSRHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20175; Mature: 20043

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTTPPKLTPAKLSAAKLTARTPFAGLLPISEGATTLSEVTHDAITWISPAKGKMATVS
CCCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHH
KALAKQTGASFPDPGRIEGAAVWSGPGQALLLGPTFKPIKGAAASDQSSAWACCALNGPD
HHHHHHHCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCC
ARAVLARLVPIDLRPESFAEGHVARTLLGHMNCVLLHRSADRYEIMVFRSMATTAAHEIA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEHHHHHHHHHHHH
EAMALVAARSRHL
HHHHHHHHHHCCC
>Mature Secondary Structure 
ADTTPPKLTPAKLSAAKLTARTPFAGLLPISEGATTLSEVTHDAITWISPAKGKMATVS
CCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHH
KALAKQTGASFPDPGRIEGAAVWSGPGQALLLGPTFKPIKGAAASDQSSAWACCALNGPD
HHHHHHHCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCC
ARAVLARLVPIDLRPESFAEGHVARTLLGHMNCVLLHRSADRYEIMVFRSMATTAAHEIA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEHHHHHHHHHHHH
EAMALVAARSRHL
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA