Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is ppaC [H]

Identifier: 89055852

GI number: 89055852

Start: 3413847

End: 3414770

Strand: Direct

Name: ppaC [H]

Synonym: Jann_3361

Alternate gene names: 89055852

Gene position: 3413847-3414770 (Clockwise)

Preceding gene: 89055851

Following gene: 89055853

Centisome position: 79.06

GC content: 59.85

Gene sequence:

>924_bases
ATGACCACATTGGTTTTCGGCCACAAATCCCCCGACACCGATTCCACAGGCTCGCCGCTGATTTGGGCGTGGTATCTGAC
CGAGGTCAAAGGCGTCCCGGCAGAGGCCGTGTTGCTGGGCGAGCCCAACACCGAAGCGGCTTTCGTGTTGGACCGCTGGG
ACCTGCCCAATCCCCGGATCATCGATAAGATAGAAGCCGGTCAATCCGTCGTCATCGTCGACACCAACAACCCGTCAGAG
CTGCCCGAGGCGATCAACGACGCGGATATCCAGGGGATCATCGACCACCACAAACTGGTGGGCGGGCTGGAGACGAAGGG
CCCCATCGACATCCGCATTGAACCGCTCGCCTGCACGGCCACGATCATGCACAAGATGATCGGCGATGACCTGTCGCAAG
CGCCCACCAACATCAAAGGCGCCATGCTGAGCTGCATCCTATCGGACACGCTGGAATTCCGCTCTCCAACGACCACCCAG
GAAGATCGCGCCGTTGCCGAGGCGCTGGCCGCCGACCTCGACATCAACATCCCCGACTACGCCGCTGAGATGTTCGCGGC
CAAATCCGATGTATCCCGTTTCTCAGATGCAGAGCTTCTGAGGATGGACAGCAAGACATATGAGGTGAGCGGAAAGACCT
TCCGTGTCTCCGTGCTGGAGACGACGTCCCCCGCCACCGTGCTGTCGCGCAAGGACAGCCTGATGGAAACGATGCCAACA
GTCGCGACCGAGGACGGTGCGGATCAGGTGCTTCTGTTCGTGATCGACATCCTGCAGGAAGAAGCGACCTTGCTGGTTCC
AAATGATCTGGTGAAGACGGTCGCGGAGAAGAGTTTCTCGACCGTCGCCAGTGACGGCGATCTGCTGGTCCTGCCCGGTA
TCGTCAGCCGCAAGAAGCAGATTATCCCCAACCTCACCGTCTGA

Upstream 100 bases:

>100_bases
CGTTGTCCAATGCAGAGAAATCCTGCGCCACGCCCGTGACATCAACAATCACCAAAGGTAGAAGGGCGCCAAATTTGACA
GATCTAGCAAGGTACGCCCC

Downstream 100 bases:

>100_bases
AGTCACGCGGCAGGGCAGGTATCCCCGCCTTGTCGTGACGCCCCAACTGGCGCGTTACTGTGGTACCGCGTTTCGCGACA
GTTGGAGGTTCCCTTGCGCT

Product: putative manganese-dependent inorganic pyrophosphatase

Products: NA

Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTTLVFGHKSPDTDSTGSPLIWAWYLTEVKGVPAEAVLLGEPNTEAAFVLDRWDLPNPRIIDKIEAGQSVVIVDTNNPSE
LPEAINDADIQGIIDHHKLVGGLETKGPIDIRIEPLACTATIMHKMIGDDLSQAPTNIKGAMLSCILSDTLEFRSPTTTQ
EDRAVAEALAADLDINIPDYAAEMFAAKSDVSRFSDAELLRMDSKTYEVSGKTFRVSVLETTSPATVLSRKDSLMETMPT
VATEDGADQVLLFVIDILQEEATLLVPNDLVKTVAEKSFSTVASDGDLLVLPGIVSRKKQIIPNLTV

Sequences:

>Translated_307_residues
MTTLVFGHKSPDTDSTGSPLIWAWYLTEVKGVPAEAVLLGEPNTEAAFVLDRWDLPNPRIIDKIEAGQSVVIVDTNNPSE
LPEAINDADIQGIIDHHKLVGGLETKGPIDIRIEPLACTATIMHKMIGDDLSQAPTNIKGAMLSCILSDTLEFRSPTTTQ
EDRAVAEALAADLDINIPDYAAEMFAAKSDVSRFSDAELLRMDSKTYEVSGKTFRVSVLETTSPATVLSRKDSLMETMPT
VATEDGADQVLLFVIDILQEEATLLVPNDLVKTVAEKSFSTVASDGDLLVLPGIVSRKKQIIPNLTV
>Mature_306_residues
TTLVFGHKSPDTDSTGSPLIWAWYLTEVKGVPAEAVLLGEPNTEAAFVLDRWDLPNPRIIDKIEAGQSVVIVDTNNPSEL
PEAINDADIQGIIDHHKLVGGLETKGPIDIRIEPLACTATIMHKMIGDDLSQAPTNIKGAMLSCILSDTLEFRSPTTTQE
DRAVAEALAADLDINIPDYAAEMFAAKSDVSRFSDAELLRMDSKTYEVSGKTFRVSVLETTSPATVLSRKDSLMETMPTV
ATEDGADQVLLFVIDILQEEATLLVPNDLVKTVAEKSFSTVASDGDLLVLPGIVSRKKQIIPNLTV

Specific function: Unknown

COG id: COG1227

COG function: function code C; Inorganic pyrophosphatase/exopolyphosphatase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PPase class C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004097
- InterPro:   IPR022934
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02833 DHHA2 [H]

EC number: =3.6.1.1 [H]

Molecular weight: Translated: 33217; Mature: 33086

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLVFGHKSPDTDSTGSPLIWAWYLTEVKGVPAEAVLLGEPNTEAAFVLDRWDLPNPRI
CCEEEECCCCCCCCCCCCCEEEEEEEHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCE
IDKIEAGQSVVIVDTNNPSELPEAINDADIQGIIDHHKLVGGLETKGPIDIRIEPLACTA
EHHCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEECHHHHH
TIMHKMIGDDLSQAPTNIKGAMLSCILSDTLEFRSPTTTQEDRAVAEALAADLDINIPDY
HHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHH
AAEMFAAKSDVSRFSDAELLRMDSKTYEVSGKTFRVSVLETTSPATVLSRKDSLMETMPT
HHHHHHHHHHHHHCCCCHHEEECCCEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHCC
VATEDGADQVLLFVIDILQEEATLLVPNDLVKTVAEKSFSTVASDGDLLVLPGIVSRKKQ
CCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH
IIPNLTV
CCCCCCC
>Mature Secondary Structure 
TTLVFGHKSPDTDSTGSPLIWAWYLTEVKGVPAEAVLLGEPNTEAAFVLDRWDLPNPRI
CEEEECCCCCCCCCCCCCEEEEEEEHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCE
IDKIEAGQSVVIVDTNNPSELPEAINDADIQGIIDHHKLVGGLETKGPIDIRIEPLACTA
EHHCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEECHHHHH
TIMHKMIGDDLSQAPTNIKGAMLSCILSDTLEFRSPTTTQEDRAVAEALAADLDINIPDY
HHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHH
AAEMFAAKSDVSRFSDAELLRMDSKTYEVSGKTFRVSVLETTSPATVLSRKDSLMETMPT
HHHHHHHHHHHHHCCCCHHEEECCCEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHCC
VATEDGADQVLLFVIDILQEEATLLVPNDLVKTVAEKSFSTVASDGDLLVLPGIVSRKKQ
CCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH
IIPNLTV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA