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The map label for this gene is mcpA [H]

Identifier: 89055851

GI number: 89055851

Start: 3411768

End: 3413714

Strand: Direct

Name: mcpA [H]

Synonym: Jann_3360

Alternate gene names: 89055851

Gene position: 3411768-3413714 (Clockwise)

Preceding gene: 89055846

Following gene: 89055852

Centisome position: 79.01

GC content: 60.45

Gene sequence:

>1947_bases
ATGTTCCTCGCCAATATGACATTGAAGACCAAACTGATCGTCACGATAGCTGCGATGCTGATCCTCCTTGCTGGCGTGCT
CGGGTATCTGGGGACGCAAAAAATCCAGGCCGCACTGAATGAGTCGATTTCCGCGGAGGAACGCGCCGGTATCCGGGCGT
TGGTCTATACCTTGCAAACGTCCCATGCAGCGCTGACGCAGCACGCGGGCGCCGATGCCGGGGGCTTTGAAATTACCTGG
CCACGGATGCCCAACACCTTGATGTTCGACGATGTAGACGCCGCCAGCGCGATATCCGGACTGAAGCCGACCGTCTTCCA
CTTCGACGCAGAGACCGGAGACTTCATGCGGATTGCGACCACCATGCGCGAAGAAAATGGCAATCGCTCGGTTGCGACCC
CGTTGGCCCGGGGGCCGGTCTACGACGCATTGATCAATGGAGAGACTTTCTCGGGCGCAGCAGAGGTCAGAGGCCACTTG
TTTCGCGCCCTCTACGTGCCTGTTTTCGATGGGACCGGTGCGATTGTAGGGGCGTTCGCCGTCGGCCGCCCGATTGAAAC
TTTGACGGCGATGATCCGTCAAAACATGATTGAAACGCTCCTTGTTACCCTCGGCATCCTTACCGTGATGGTGCTGGTCG
CCTTCTTCTCGATCCGCAACATGCTGGCCCCTCTGACCCATGTTGCACGGTCGCTCGGGAAGCTGTCAGAAGGCACGCTG
GATGAAGACATCGGCCATCAGAACCGAAACGACGAGATTGGAAAAATCTCCAAGGCAATGGTCGTATTGCAAGAGTCGAT
GCAGACGGCGGAAGAGCTCAAGGCCGCCGATGTGGAGCGGTCAACGATCGTCGCAGCAAAACAGCAAGAGCAAGATATTG
TTGTCACTGCCTTGACCCAGGGCCTGTCCCGACTTGGCAATCTTGACCTGACCCAGCAGATCGAAAACACGCCCGAGGCC
CCCTTCCCCGCAGATTATGAAGAACTGCGCACGTCCTACAACATGCTTTTGGACAACTTGTCCGAGAGCGTGGAGGCGAT
CCGTGACGTCGCCACCGAAGTGTCCCACGACGCGCGAGAAATGGCGGAGGCGTCCTCGGATCTGTCATCGCGAACCGAAA
GCCAGGCGGCAACGCTGGAACAATCGGCCGCAGCCCTTGAGGAAATGAGTGCGAGCGTGCTGTCCACCGCCGCAAACGCA
AGCGACGCCGAGACAACGACGCAGGAGAACCGGACCAATGCCAAGCGCACCGGCGAGATCGTCGACACCGCGATCAAGGC
CATGTCGGCCATCGAAGAATCCTCCAAAAAGATCACTCAGATCATTTCGGTCATCGACGATATCGCCTTCCAGACCAACC
TCCTTGCCCTGAATGCCGGGGTCGAGGCGGCGCGCGCGGGCGAAGCTGGCAGGGGATTTGCCGTGGTCGCCTCCGAAGTG
CGCGCCCTGGCGCAGCACTCCTCGGCGTCCGCACAAGAGATCAAGGGGTTGATCGCGTCGTCCAGCGACCATGTCGATAA
CGGCAGTAAGCTGGTTCACGATGCGGGACGATCCATCAACGACATCATAGATCGCGTCGACCGTGTCACAAGCCTGGTGT
CCGACATCGCAGTGTCTGCGAAAGAACAGTCGATCGGCGTGACGGAGATCAACGCTGCCGTCCGGGACCTGGACACTGCC
ACCCAGGGCAACGCCGCGATGGCGGAAGAGACGTCCGCCGCCAGTGAAGGGCTGACAAATGCCGCAGACCGGCTGGCCAG
CCATCTGGCACGTTTCAAGCTGGCGGATGCATCCGACGCCAACTGGGCTGCCGCGGCGGCAACGGCACCGGCTGCGCGTG
CCGCCGACGGCCCCCAAGACGCAGATGCATTCGCACCCCCTTCCCCCGCAATAGGCGGCACCCGATCGGCATCGACCGCG
CCGGTCAACGCCTTTCAGGACTTCTGA

Upstream 100 bases:

>100_bases
CTCACGAGGGCTCAATCTTGATCTTTGGACGGGTAACCGGCTGTTCATTGTTTGGGTCTAAACCGAGCCGGAACCACATG
ATGAGCAAGGGTGATTGATC

Downstream 100 bases:

>100_bases
GACCGGGGCGTTCGGGCCGCCCATCAAAGGGCCGTTGTCCAATGCAGAGAAATCCTGCGCCACGCCCGTGACATCAACAA
TCACCAAAGGTAGAAGGGCG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 648; Mature: 648

Protein sequence:

>648_residues
MFLANMTLKTKLIVTIAAMLILLAGVLGYLGTQKIQAALNESISAEERAGIRALVYTLQTSHAALTQHAGADAGGFEITW
PRMPNTLMFDDVDAASAISGLKPTVFHFDAETGDFMRIATTMREENGNRSVATPLARGPVYDALINGETFSGAAEVRGHL
FRALYVPVFDGTGAIVGAFAVGRPIETLTAMIRQNMIETLLVTLGILTVMVLVAFFSIRNMLAPLTHVARSLGKLSEGTL
DEDIGHQNRNDEIGKISKAMVVLQESMQTAEELKAADVERSTIVAAKQQEQDIVVTALTQGLSRLGNLDLTQQIENTPEA
PFPADYEELRTSYNMLLDNLSESVEAIRDVATEVSHDAREMAEASSDLSSRTESQAATLEQSAAALEEMSASVLSTAANA
SDAETTTQENRTNAKRTGEIVDTAIKAMSAIEESSKKITQIISVIDDIAFQTNLLALNAGVEAARAGEAGRGFAVVASEV
RALAQHSSASAQEIKGLIASSSDHVDNGSKLVHDAGRSINDIIDRVDRVTSLVSDIAVSAKEQSIGVTEINAAVRDLDTA
TQGNAAMAEETSAASEGLTNAADRLASHLARFKLADASDANWAAAAATAPAARAADGPQDADAFAPPSPAIGGTRSASTA
PVNAFQDF

Sequences:

>Translated_648_residues
MFLANMTLKTKLIVTIAAMLILLAGVLGYLGTQKIQAALNESISAEERAGIRALVYTLQTSHAALTQHAGADAGGFEITW
PRMPNTLMFDDVDAASAISGLKPTVFHFDAETGDFMRIATTMREENGNRSVATPLARGPVYDALINGETFSGAAEVRGHL
FRALYVPVFDGTGAIVGAFAVGRPIETLTAMIRQNMIETLLVTLGILTVMVLVAFFSIRNMLAPLTHVARSLGKLSEGTL
DEDIGHQNRNDEIGKISKAMVVLQESMQTAEELKAADVERSTIVAAKQQEQDIVVTALTQGLSRLGNLDLTQQIENTPEA
PFPADYEELRTSYNMLLDNLSESVEAIRDVATEVSHDAREMAEASSDLSSRTESQAATLEQSAAALEEMSASVLSTAANA
SDAETTTQENRTNAKRTGEIVDTAIKAMSAIEESSKKITQIISVIDDIAFQTNLLALNAGVEAARAGEAGRGFAVVASEV
RALAQHSSASAQEIKGLIASSSDHVDNGSKLVHDAGRSINDIIDRVDRVTSLVSDIAVSAKEQSIGVTEINAAVRDLDTA
TQGNAAMAEETSAASEGLTNAADRLASHLARFKLADASDANWAAAAATAPAARAADGPQDADAFAPPSPAIGGTRSASTA
PVNAFQDF
>Mature_648_residues
MFLANMTLKTKLIVTIAAMLILLAGVLGYLGTQKIQAALNESISAEERAGIRALVYTLQTSHAALTQHAGADAGGFEITW
PRMPNTLMFDDVDAASAISGLKPTVFHFDAETGDFMRIATTMREENGNRSVATPLARGPVYDALINGETFSGAAEVRGHL
FRALYVPVFDGTGAIVGAFAVGRPIETLTAMIRQNMIETLLVTLGILTVMVLVAFFSIRNMLAPLTHVARSLGKLSEGTL
DEDIGHQNRNDEIGKISKAMVVLQESMQTAEELKAADVERSTIVAAKQQEQDIVVTALTQGLSRLGNLDLTQQIENTPEA
PFPADYEELRTSYNMLLDNLSESVEAIRDVATEVSHDAREMAEASSDLSSRTESQAATLEQSAAALEEMSASVLSTAANA
SDAETTTQENRTNAKRTGEIVDTAIKAMSAIEESSKKITQIISVIDDIAFQTNLLALNAGVEAARAGEAGRGFAVVASEV
RALAQHSSASAQEIKGLIASSSDHVDNGSKLVHDAGRSINDIIDRVDRVTSLVSDIAVSAKEQSIGVTEINAAVRDLDTA
TQGNAAMAEETSAASEGLTNAADRLASHLARFKLADASDANWAAAAATAPAARAADGPQDADAFAPPSPAIGGTRSASTA
PVNAFQDF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Note=Localized at the flagellum-bearing pole of the swarmer cell [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=298, Percent_Identity=43.6241610738255, Blast_Score=209, Evalue=6e-55,
Organism=Escherichia coli, GI1788195, Length=268, Percent_Identity=46.2686567164179, Blast_Score=207, Evalue=2e-54,
Organism=Escherichia coli, GI1788194, Length=274, Percent_Identity=45.6204379562044, Blast_Score=203, Evalue=4e-53,
Organism=Escherichia coli, GI2367378, Length=301, Percent_Identity=43.8538205980066, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1789453, Length=242, Percent_Identity=42.1487603305785, Blast_Score=172, Evalue=6e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 68302; Mature: 68302

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLANMTLKTKLIVTIAAMLILLAGVLGYLGTQKIQAALNESISAEERAGIRALVYTLQT
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHH
SHAALTQHAGADAGGFEITWPRMPNTLMFDDVDAASAISGLKPTVFHFDAETGDFMRIAT
HHHHHHHHCCCCCCCCEEECCCCCCCEEECCCCHHHHHCCCCCEEEEEECCCCCHHHHHH
TMREENGNRSVATPLARGPVYDALINGETFSGAAEVRGHLFRALYVPVFDGTGAIVGAFA
HHHHCCCCCCCCCCHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHH
VGRPIETLTAMIRQNMIETLLVTLGILTVMVLVAFFSIRNMLAPLTHVARSLGKLSEGTL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DEDIGHQNRNDEIGKISKAMVVLQESMQTAEELKAADVERSTIVAAKQQEQDIVVTALTQ
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHH
GLSRLGNLDLTQQIENTPEAPFPADYEELRTSYNMLLDNLSESVEAIRDVATEVSHDARE
HHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAEASSDLSSRTESQAATLEQSAAALEEMSASVLSTAANASDAETTTQENRTNAKRTGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHH
VDTAIKAMSAIEESSKKITQIISVIDDIAFQTNLLALNAGVEAARAGEAGRGFAVVASEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCCHHHHHHHH
RALAQHSSASAQEIKGLIASSSDHVDNGSKLVHDAGRSINDIIDRVDRVTSLVSDIAVSA
HHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
KEQSIGVTEINAAVRDLDTATQGNAAMAEETSAASEGLTNAADRLASHLARFKLADASDA
HHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCC
NWAAAAATAPAARAADGPQDADAFAPPSPAIGGTRSASTAPVNAFQDF
CCHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MFLANMTLKTKLIVTIAAMLILLAGVLGYLGTQKIQAALNESISAEERAGIRALVYTLQT
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHH
SHAALTQHAGADAGGFEITWPRMPNTLMFDDVDAASAISGLKPTVFHFDAETGDFMRIAT
HHHHHHHHCCCCCCCCEEECCCCCCCEEECCCCHHHHHCCCCCEEEEEECCCCCHHHHHH
TMREENGNRSVATPLARGPVYDALINGETFSGAAEVRGHLFRALYVPVFDGTGAIVGAFA
HHHHCCCCCCCCCCHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHH
VGRPIETLTAMIRQNMIETLLVTLGILTVMVLVAFFSIRNMLAPLTHVARSLGKLSEGTL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DEDIGHQNRNDEIGKISKAMVVLQESMQTAEELKAADVERSTIVAAKQQEQDIVVTALTQ
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHH
GLSRLGNLDLTQQIENTPEAPFPADYEELRTSYNMLLDNLSESVEAIRDVATEVSHDARE
HHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAEASSDLSSRTESQAATLEQSAAALEEMSASVLSTAANASDAETTTQENRTNAKRTGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHH
VDTAIKAMSAIEESSKKITQIISVIDDIAFQTNLLALNAGVEAARAGEAGRGFAVVASEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCCHHHHHHHH
RALAQHSSASAQEIKGLIASSSDHVDNGSKLVHDAGRSINDIIDRVDRVTSLVSDIAVSA
HHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
KEQSIGVTEINAAVRDLDTATQGNAAMAEETSAASEGLTNAADRLASHLARFKLADASDA
HHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCC
NWAAAAATAPAARAADGPQDADAFAPPSPAIGGTRSASTAPVNAFQDF
CCHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1577276; 11259647 [H]