Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055825

Identifier: 89055825

GI number: 89055825

Start: 3384045

End: 3385160

Strand: Direct

Name: 89055825

Synonym: Jann_3334

Alternate gene names: NA

Gene position: 3384045-3385160 (Clockwise)

Preceding gene: 89055824

Following gene: 89055826

Centisome position: 78.37

GC content: 69.18

Gene sequence:

>1116_bases
GTGTCTGGAAGAACCGTGTCGCTTAAGGCCCGCCTGCTGGCGCGGATCGCGCGGTTGGGGCCGATATCGCTGGCCGATTA
CATGGCCGAATGCCTGCACGACCCGCAATTTGGCTATTACGCCACCCGCGATCCCCTGGGGCGGGGGGGCGATTTCATCA
CCGCGCCCGAGATATCTCAGATGTTCGGAGAGCTGATCGGCCTATGGCTGGCGCAGGTCTGGATGGATCAGGGCGGCGGG
GCGGCCGCACTGGTGGAGTTGGGCCCGGGGCGGGGCACGTTGATGGCCGACGTGATGCGCGCCACGCGCGGCGTGCCGGG
CTTCCACGACGCGGTCACGGTGCATCTGGTGGAGGCGTCCCCGGTGTTGCGCGCCATGCAGACAGAGGCATTGGCGGCAT
ACGCGCCGAGGTTCCACGACAATCTGGCTGACGTGCCGGAAGGGCCAATCCTGCTGGTGGCCAACGAGTTCTTCGACGCG
CTGCCGATCCGGCAATTCCAGATGAGCGATGCAGGCGATTGGCAGGAGCGGCAGATTGGGGCATCCGACGGCGCGCTGAT
CTGGGGCCTCGCACCCCCGGCCCCGCTGGATGTCCGTGACGGATTTGCGCCCGGTATGCCCGGCATGATCGTGGAGACCT
GCGCCCCGGCAGAGGCGATTGCCGCCGAGATCGGGCGACGCGTGGCCCAGGGCGGCGCGGCGCTGATCGTGGATTACGGC
GATTGGCACAGCGCGGGCGATACGTTTCAGGCGCTTGCCAAGCACGCCTACACGGACCCGTTGGACGCGCCGGGAGAGGC
CGATTTGACCGCCCATGTGGCGTTTGCCCCCATCGCGCGCGCGGCCCGGGCGGCGTCTGGCGTGGTCGCCTCGGGGCTGA
CACGGCAGGGGATGTTCCTAGAGCGGCTTGGCATCACGGCACGGGCACAGGCGCTGGCGCGGGGCCTGGACGGCACGGCG
CTTGACACCCACATCGCCGCCCACCGCCGCTTGACGCATGGGGATGAAATGGGAACTCTGTTCAAGGTGCTGGCGCTGAC
CCCGGAGGGCGCGCCGCCACCGCCCGCCATAGACCCAGCCCCTGCCCCATCCGCTGACCCGGAGCCCGCCCGATGA

Upstream 100 bases:

>100_bases
TACGCTGTGGCGCTGTCGCCCAATGTGGGGCTGACGATGGGGCAAATTCTGTGTGTGCCAATGGTGATTGCCGGATTCTG
GTTGGTGGTACGGGCCCACC

Downstream 100 bases:

>100_bases
CCCTCTCGCCCCTGACATCCCCGCTTCTGGAGGGCGTGACCCATGGGTTTTTCACCCGTGCGGGAGGGGCATCGACGGGG
ATCTACGAGGGGTTGAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MSGRTVSLKARLLARIARLGPISLADYMAECLHDPQFGYYATRDPLGRGGDFITAPEISQMFGELIGLWLAQVWMDQGGG
AAALVELGPGRGTLMADVMRATRGVPGFHDAVTVHLVEASPVLRAMQTEALAAYAPRFHDNLADVPEGPILLVANEFFDA
LPIRQFQMSDAGDWQERQIGASDGALIWGLAPPAPLDVRDGFAPGMPGMIVETCAPAEAIAAEIGRRVAQGGAALIVDYG
DWHSAGDTFQALAKHAYTDPLDAPGEADLTAHVAFAPIARAARAASGVVASGLTRQGMFLERLGITARAQALARGLDGTA
LDTHIAAHRRLTHGDEMGTLFKVLALTPEGAPPPPAIDPAPAPSADPEPAR

Sequences:

>Translated_371_residues
MSGRTVSLKARLLARIARLGPISLADYMAECLHDPQFGYYATRDPLGRGGDFITAPEISQMFGELIGLWLAQVWMDQGGG
AAALVELGPGRGTLMADVMRATRGVPGFHDAVTVHLVEASPVLRAMQTEALAAYAPRFHDNLADVPEGPILLVANEFFDA
LPIRQFQMSDAGDWQERQIGASDGALIWGLAPPAPLDVRDGFAPGMPGMIVETCAPAEAIAAEIGRRVAQGGAALIVDYG
DWHSAGDTFQALAKHAYTDPLDAPGEADLTAHVAFAPIARAARAASGVVASGLTRQGMFLERLGITARAQALARGLDGTA
LDTHIAAHRRLTHGDEMGTLFKVLALTPEGAPPPPAIDPAPAPSADPEPAR
>Mature_370_residues
SGRTVSLKARLLARIARLGPISLADYMAECLHDPQFGYYATRDPLGRGGDFITAPEISQMFGELIGLWLAQVWMDQGGGA
AALVELGPGRGTLMADVMRATRGVPGFHDAVTVHLVEASPVLRAMQTEALAAYAPRFHDNLADVPEGPILLVANEFFDAL
PIRQFQMSDAGDWQERQIGASDGALIWGLAPPAPLDVRDGFAPGMPGMIVETCAPAEAIAAEIGRRVAQGGAALIVDYGD
WHSAGDTFQALAKHAYTDPLDAPGEADLTAHVAFAPIARAARAASGVVASGLTRQGMFLERLGITARAQALARGLDGTAL
DTHIAAHRRLTHGDEMGTLFKVLALTPEGAPPPPAIDPAPAPSADPEPAR

Specific function: Unknown

COG id: COG1565

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21396487, Length=378, Percent_Identity=37.3015873015873, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI145701028, Length=344, Percent_Identity=29.6511627906977, Blast_Score=108, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI193211224, Length=381, Percent_Identity=34.1207349081365, Blast_Score=179, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24645885, Length=375, Percent_Identity=38.6666666666667, Blast_Score=215, Evalue=5e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38966; Mature: 38835

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRTVSLKARLLARIARLGPISLADYMAECLHDPQFGYYATRDPLGRGGDFITAPEISQ
CCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEECCHHHHH
MFGELIGLWLAQVWMDQGGGAAALVELGPGRGTLMADVMRATRGVPGFHDAVTVHLVEAS
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCC
PVLRAMQTEALAAYAPRFHDNLADVPEGPILLVANEFFDALPIRQFQMSDAGDWQERQIG
HHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEECHHHHHCCCHHEECCCCCCHHHHHCC
ASDGALIWGLAPPAPLDVRDGFAPGMPGMIVETCAPAEAIAAEIGRRVAQGGAALIVDYG
CCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECC
DWHSAGDTFQALAKHAYTDPLDAPGEADLTAHVAFAPIARAARAASGVVASGLTRQGMFL
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ERLGITARAQALARGLDGTALDTHIAAHRRLTHGDEMGTLFKVLALTPEGAPPPPAIDPA
HHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
PAPSADPEPAR
CCCCCCCCCCC
>Mature Secondary Structure 
SGRTVSLKARLLARIARLGPISLADYMAECLHDPQFGYYATRDPLGRGGDFITAPEISQ
CCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEECCHHHHH
MFGELIGLWLAQVWMDQGGGAAALVELGPGRGTLMADVMRATRGVPGFHDAVTVHLVEAS
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCC
PVLRAMQTEALAAYAPRFHDNLADVPEGPILLVANEFFDALPIRQFQMSDAGDWQERQIG
HHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEECHHHHHCCCHHEECCCCCCHHHHHCC
ASDGALIWGLAPPAPLDVRDGFAPGMPGMIVETCAPAEAIAAEIGRRVAQGGAALIVDYG
CCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECC
DWHSAGDTFQALAKHAYTDPLDAPGEADLTAHVAFAPIARAARAASGVVASGLTRQGMFL
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ERLGITARAQALARGLDGTALDTHIAAHRRLTHGDEMGTLFKVLALTPEGAPPPPAIDPA
HHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
PAPSADPEPAR
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA