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The map label for this gene is yfiH [C]

Identifier: 89055826

GI number: 89055826

Start: 3385157

End: 3385903

Strand: Direct

Name: yfiH [C]

Synonym: Jann_3335

Alternate gene names: 89055826

Gene position: 3385157-3385903 (Clockwise)

Preceding gene: 89055825

Following gene: 89055829

Centisome position: 78.4

GC content: 67.47

Gene sequence:

>747_bases
ATGACCCTCTCGCCCCTGACATCCCCGCTTCTGGAGGGCGTGACCCATGGGTTTTTCACCCGTGCGGGAGGGGCATCGAC
GGGGATCTACGAGGGGTTGAACTGCGGCACCGGATCCTCGGACCAGCGGGAGGTCGTGGCGATGAACCGCGCGCGGGTGG
CCGACATTATGGGCGTGGAGGCTTTGGCGGGCGTACATCAGGTGCATTCAGCGACGGCTATCGTCGTGGAGGATGTGGCG
GCGCGACCCCGGGCCGACGCGCTGGTCACGGACCGGCCCGGCGTGGCTCTGACAATCCTGACCGCCGATTGCCAGCCGGT
GCTGTTTGCGGACCGCGCGGCGGGCGTGATCGGGGCGGCGCATGCGGGTTGGAAAGGGGCGCTGGACGGGGTGCTGGAGG
CGACACTGGACGCGATGGAGGGTCTGGGCGCAGACAGGGGCCGGGTGCGCGCGGTCATCGGCCCGTCGATCAGCCAGCGC
GCCTATGAGGTGGGCCAGGAGTTTCTGGACCGCTTCCTGGACGCAGAATCCGACAATGGGCGTTTTTTCGCAAACGGCGT
GGACGGCAAGTATCAGTTTGACCTGACAGGCTTTGGTTTGGCGCGCCTGCGCGCGGCGGGCGTCGCCGAGGCGGAATGGA
CCGGCCATTGCACCTACACGGATGCGGAGCGGTTTTATTCCTACCGGCGCGCGACCCACCGGGGTGAGGCTGACTATGGC
CGGTTGATTGCGGCGATCCGGCTGTAG

Upstream 100 bases:

>100_bases
GAACTCTGTTCAAGGTGCTGGCGCTGACCCCGGAGGGCGCGCCGCCACCGCCCGCCATAGACCCAGCCCCTGCCCCATCC
GCTGACCCGGAGCCCGCCCG

Downstream 100 bases:

>100_bases
GCCGTCGGCGCTGATCTGGACCCAATCGCGGCGGGACCTGCCACACAATGCGCACAATTCGGGGAGCATTTTCCGAAAAT
TCTAATGAAATAGGCGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MTLSPLTSPLLEGVTHGFFTRAGGASTGIYEGLNCGTGSSDQREVVAMNRARVADIMGVEALAGVHQVHSATAIVVEDVA
ARPRADALVTDRPGVALTILTADCQPVLFADRAAGVIGAAHAGWKGALDGVLEATLDAMEGLGADRGRVRAVIGPSISQR
AYEVGQEFLDRFLDAESDNGRFFANGVDGKYQFDLTGFGLARLRAAGVAEAEWTGHCTYTDAERFYSYRRATHRGEADYG
RLIAAIRL

Sequences:

>Translated_248_residues
MTLSPLTSPLLEGVTHGFFTRAGGASTGIYEGLNCGTGSSDQREVVAMNRARVADIMGVEALAGVHQVHSATAIVVEDVA
ARPRADALVTDRPGVALTILTADCQPVLFADRAAGVIGAAHAGWKGALDGVLEATLDAMEGLGADRGRVRAVIGPSISQR
AYEVGQEFLDRFLDAESDNGRFFANGVDGKYQFDLTGFGLARLRAAGVAEAEWTGHCTYTDAERFYSYRRATHRGEADYG
RLIAAIRL
>Mature_247_residues
TLSPLTSPLLEGVTHGFFTRAGGASTGIYEGLNCGTGSSDQREVVAMNRARVADIMGVEALAGVHQVHSATAIVVEDVAA
RPRADALVTDRPGVALTILTADCQPVLFADRAAGVIGAAHAGWKGALDGVLEATLDAMEGLGADRGRVRAVIGPSISQRA
YEVGQEFLDRFLDAESDNGRFFANGVDGKYQFDLTGFGLARLRAAGVAEAEWTGHCTYTDAERFYSYRRATHRGEADYGR
LIAAIRL

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=177, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI190194372, Length=177, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=3e-14,
Organism=Escherichia coli, GI1788945, Length=224, Percent_Identity=35.2678571428571, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 26276; Mature: 26145

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSPLTSPLLEGVTHGFFTRAGGASTGIYEGLNCGTGSSDQREVVAMNRARVADIMGVE
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ALAGVHQVHSATAIVVEDVAARPRADALVTDRPGVALTILTADCQPVLFADRAAGVIGAA
HHHHHHHHHHHHHHEEHHHCCCCCCCEEEECCCCEEEEEEECCCCEEEEECCCCCHHCCC
HAGWKGALDGVLEATLDAMEGLGADRGRVRAVIGPSISQRAYEVGQEFLDRFLDAESDNG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCC
RFFANGVDGKYQFDLTGFGLARLRAAGVAEAEWTGHCTYTDAERFYSYRRATHRGEADYG
EEEEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCHH
RLIAAIRL
HHHHEECC
>Mature Secondary Structure 
TLSPLTSPLLEGVTHGFFTRAGGASTGIYEGLNCGTGSSDQREVVAMNRARVADIMGVE
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ALAGVHQVHSATAIVVEDVAARPRADALVTDRPGVALTILTADCQPVLFADRAAGVIGAA
HHHHHHHHHHHHHHEEHHHCCCCCCCEEEECCCCEEEEEEECCCCEEEEECCCCCHHCCC
HAGWKGALDGVLEATLDAMEGLGADRGRVRAVIGPSISQRAYEVGQEFLDRFLDAESDNG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCC
RFFANGVDGKYQFDLTGFGLARLRAAGVAEAEWTGHCTYTDAERFYSYRRATHRGEADYG
EEEEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCHH
RLIAAIRL
HHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]