Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055786

Identifier: 89055786

GI number: 89055786

Start: 3350160

End: 3350561

Strand: Direct

Name: 89055786

Synonym: Jann_3295

Alternate gene names: NA

Gene position: 3350160-3350561 (Clockwise)

Preceding gene: 89055785

Following gene: 89055787

Centisome position: 77.59

GC content: 63.43

Gene sequence:

>402_bases
ATGCCGTCCCAACCCCTCCTCGCTTCGCTCCTCGCAGTTGCTTTCTCAAGCAATGCCGGCGGCGCGGTCGCGTTTGAAGA
TCTGGACTGCATCGGTACCGAGTATTGCAATGATGAGGGCTGCACGCCCTCCGTAGACGTGTTTCCCGTGGCCTTCGACT
GGACCACCGACAGCCTCACAATCGGCGTCGGTGGCAGCAACGTCCGCTTGATATCGCAAGTCTCCGACGTCTCACCCGAG
GCGGCGTCTGGCCAAATGGTCTACGCCGGGCCTGATGGCATCGGGTTGTGGCTGACCTTTGTGGGCGAGGCCCTGTCCAT
GGAGCTGTTTCTGGACATGCCGGTTCATGATGCGCGCAGGGGCACGCACCATGCCCTGTGCGCCGCGCGGGAGGCGGCCT
GA

Upstream 100 bases:

>100_bases
ATGGCACCGCATCCCTGAGTGATGTGACCTGACTTCGGCCCGCCCCCCTTTGCCGGGGGGCGGGCCTTCCCCAGTTCGTG
CGCAAGGTCACTTCGTTCCC

Downstream 100 bases:

>100_bases
GATGCGGACACCAAGCCATTCTGCCGGAGCGTCCCCCATGGCCGATACTGCCACACTGCTGCCCTGCCGCGCGATGACGA
GGTTCGACGGCGACGACATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MPSQPLLASLLAVAFSSNAGGAVAFEDLDCIGTEYCNDEGCTPSVDVFPVAFDWTTDSLTIGVGGSNVRLISQVSDVSPE
AASGQMVYAGPDGIGLWLTFVGEALSMELFLDMPVHDARRGTHHALCAAREAA

Sequences:

>Translated_133_residues
MPSQPLLASLLAVAFSSNAGGAVAFEDLDCIGTEYCNDEGCTPSVDVFPVAFDWTTDSLTIGVGGSNVRLISQVSDVSPE
AASGQMVYAGPDGIGLWLTFVGEALSMELFLDMPVHDARRGTHHALCAAREAA
>Mature_132_residues
PSQPLLASLLAVAFSSNAGGAVAFEDLDCIGTEYCNDEGCTPSVDVFPVAFDWTTDSLTIGVGGSNVRLISQVSDVSPEA
ASGQMVYAGPDGIGLWLTFVGEALSMELFLDMPVHDARRGTHHALCAAREAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13851; Mature: 13719

Theoretical pI: Translated: 3.86; Mature: 3.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSQPLLASLLAVAFSSNAGGAVAFEDLDCIGTEYCNDEGCTPSVDVFPVAFDWTTDSLT
CCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEE
IGVGGSNVRLISQVSDVSPEAASGQMVYAGPDGIGLWLTFVGEALSMELFLDMPVHDARR
EEECCCCEEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHEEEEEEECCCCCCCC
GTHHALCAAREAA
CCHHHHHHHCCCC
>Mature Secondary Structure 
PSQPLLASLLAVAFSSNAGGAVAFEDLDCIGTEYCNDEGCTPSVDVFPVAFDWTTDSLT
CCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEE
IGVGGSNVRLISQVSDVSPEAASGQMVYAGPDGIGLWLTFVGEALSMELFLDMPVHDARR
EEECCCCEEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHEEEEEEECCCCCCCC
GTHHALCAAREAA
CCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA