Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055760

Identifier: 89055760

GI number: 89055760

Start: 3323787

End: 3324662

Strand: Direct

Name: 89055760

Synonym: Jann_3269

Alternate gene names: NA

Gene position: 3323787-3324662 (Clockwise)

Preceding gene: 89055759

Following gene: 89055761

Centisome position: 76.98

GC content: 67.24

Gene sequence:

>876_bases
ATGAGCTTCACCGTCGCCACCATCGCGCGGGAGCCCTGGCCCGTTCTCAACCGCTTCCTCACCTGGCATCTGGATCAGGG
GGCGGAGCGGATCATCCTCTACCTCGATGATCCGGATGACCCGTCCCTGCCCCGCCTGCGTGGCGAGCCCCGCATTGACG
CACGCCCCTGCACGCCCGCGTTCTGGCGCCAGATCGGCCTCAAGCAAGACGCGCGGTTCACCCGCCGCCAAAGGGGCGTT
CTGTCCCAAGCCTACCACGAGTTGGAGGATGGCTGGCTTCTGGTTCTGGATGCCGATGAGATGATGTGGATGTCCGGTCG
GACGATCCCAGAGGCGCTGGCCACCCTGCCGGATGAAGCGCAAAGCCTGCGCGTGCGCAGCGCCGAACAGGTGCGCCTGT
CTGACGGGTCGGAGGCCTTCCGAACCCCCATCGAGCGGGCCGCCGTGGACCGTGTCTATGGCGACCTCTCGGGCCTTCTG
CGCGCCCGCTTCGGCTTCACCTACCATCCCGAGGGCAAGAGCTTTCACCGTGCGGGCCAACGGTTGAACATGAAACTGCA
TTGGGCTCAGGATGCCAACGGCGACCGCACCCCCGGCCCCGTCTGGGGGCGCGCGGAGCGGGCTTATCTGATGCATTACG
CGGCCCCCGACTATGCCCGTTGGAGGGCCAAGGTCAACTGGCGCGCAGGTGCCAGCGGCTTTGTCCTGCCGGTGAAAGAG
CAGATCACCGAGATCGCCGAAAGCAACGACCCGGAGGCGGGCTACCAGGACCTTTACCGGACGCTGCACGGGCTGACGGA
CGCGCAGGCATTGGCGCTGGAGGCCGAAGGGGGCCTGCTGCGCGACGGGCCGAAGGTCCTGGATCTGGGCGGGTAG

Upstream 100 bases:

>100_bases
AGACCTCCGTCGCGTTCCACCGGGACAGCGCCGCCAGGTTGCGGGACCGCGACGACTTCGCCCATCTGCTGGAGCGCATG
GCCGCCGTGCCGACCGCGCC

Downstream 100 bases:

>100_bases
ATCGTGGCCGGGCGCACCATTGTCACGATGATGAAGGATGAGGCGCCCTTCCTGCTGCATTGGATCGCGCATCACCGGTT
GATCGGGTTCGACCGGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSFTVATIAREPWPVLNRFLTWHLDQGAERIILYLDDPDDPSLPRLRGEPRIDARPCTPAFWRQIGLKQDARFTRRQRGV
LSQAYHELEDGWLLVLDADEMMWMSGRTIPEALATLPDEAQSLRVRSAEQVRLSDGSEAFRTPIERAAVDRVYGDLSGLL
RARFGFTYHPEGKSFHRAGQRLNMKLHWAQDANGDRTPGPVWGRAERAYLMHYAAPDYARWRAKVNWRAGASGFVLPVKE
QITEIAESNDPEAGYQDLYRTLHGLTDAQALALEAEGGLLRDGPKVLDLGG

Sequences:

>Translated_291_residues
MSFTVATIAREPWPVLNRFLTWHLDQGAERIILYLDDPDDPSLPRLRGEPRIDARPCTPAFWRQIGLKQDARFTRRQRGV
LSQAYHELEDGWLLVLDADEMMWMSGRTIPEALATLPDEAQSLRVRSAEQVRLSDGSEAFRTPIERAAVDRVYGDLSGLL
RARFGFTYHPEGKSFHRAGQRLNMKLHWAQDANGDRTPGPVWGRAERAYLMHYAAPDYARWRAKVNWRAGASGFVLPVKE
QITEIAESNDPEAGYQDLYRTLHGLTDAQALALEAEGGLLRDGPKVLDLGG
>Mature_290_residues
SFTVATIAREPWPVLNRFLTWHLDQGAERIILYLDDPDDPSLPRLRGEPRIDARPCTPAFWRQIGLKQDARFTRRQRGVL
SQAYHELEDGWLLVLDADEMMWMSGRTIPEALATLPDEAQSLRVRSAEQVRLSDGSEAFRTPIERAAVDRVYGDLSGLLR
ARFGFTYHPEGKSFHRAGQRLNMKLHWAQDANGDRTPGPVWGRAERAYLMHYAAPDYARWRAKVNWRAGASGFVLPVKEQ
ITEIAESNDPEAGYQDLYRTLHGLTDAQALALEAEGGLLRDGPKVLDLGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32906; Mature: 32774

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTVATIAREPWPVLNRFLTWHLDQGAERIILYLDDPDDPSLPRLRGEPRIDARPCTPA
CCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHH
FWRQIGLKQDARFTRRQRGVLSQAYHELEDGWLLVLDADEMMWMSGRTIPEALATLPDEA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCHHHHHHCCCCHH
QSLRVRSAEQVRLSDGSEAFRTPIERAAVDRVYGDLSGLLRARFGFTYHPEGKSFHRAGQ
HHHHHCCCCEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHH
RLNMKLHWAQDANGDRTPGPVWGRAERAYLMHYAAPDYARWRAKVNWRAGASGFVLPVKE
HCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHEEEEEECCCCCCCEEEHHH
QITEIAESNDPEAGYQDLYRTLHGLTDAQALALEAEGGLLRDGPKVLDLGG
HHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCEECCCCCEEECCC
>Mature Secondary Structure 
SFTVATIAREPWPVLNRFLTWHLDQGAERIILYLDDPDDPSLPRLRGEPRIDARPCTPA
CEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHH
FWRQIGLKQDARFTRRQRGVLSQAYHELEDGWLLVLDADEMMWMSGRTIPEALATLPDEA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCHHHHHHCCCCHH
QSLRVRSAEQVRLSDGSEAFRTPIERAAVDRVYGDLSGLLRARFGFTYHPEGKSFHRAGQ
HHHHHCCCCEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHH
RLNMKLHWAQDANGDRTPGPVWGRAERAYLMHYAAPDYARWRAKVNWRAGASGFVLPVKE
HCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHEEEEEECCCCCCCEEEHHH
QITEIAESNDPEAGYQDLYRTLHGLTDAQALALEAEGGLLRDGPKVLDLGG
HHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA