Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055761

Identifier: 89055761

GI number: 89055761

Start: 3324666

End: 3325850

Strand: Direct

Name: 89055761

Synonym: Jann_3270

Alternate gene names: NA

Gene position: 3324666-3325850 (Clockwise)

Preceding gene: 89055760

Following gene: 89055764

Centisome position: 77.0

GC content: 66.24

Gene sequence:

>1185_bases
GTGGCCGGGCGCACCATTGTCACGATGATGAAGGATGAGGCGCCCTTCCTGCTGCATTGGATCGCGCATCACCGGTTGAT
CGGGTTCGACCGGATCGTCGTTTTCACCAACGATTGCAGCGATGGCACCGACGCGATGCTGGATCGGTTGGAGAGGATGG
GAGAGGTCACCCATCGCCGCAACACGGTTCCCGATGGCGGCAAGCCACAACCGCTTGCATTGCGCCGCGCAGGGAAACTG
GCGGAGGTTACGGGAAGCGACTGGCTGATCGCGCTGGATGTGGACGAATATGTCCACGTGAAGGTCGGGGGCGGGCATCT
GGATGATCTGCTGGCGACCGCGCCCGAGGCCGACGGCGTCGCGCTGACCTGGCGGATGATGGGGTCCAATGGCCTGACGG
GCTGGACCGACACCCCGGTGACGGAGGCCTATACCCGCGGCGCACCGGATCTGTTTCGCAAGGGCTGGGGCGTGAAGACG
CTGTTCCAACCCTTCGATCAGATGAAACTTGGCATCCACCGCCCCACCGTGAAGGGCCGCGACAAGGCGGCGTTGGCGCA
GCGGGCCTGGGTCAACGGCTCAGCCAAGCCGATGACGCGCGGGTTTATGGAGGGGATGTGGCGCTCGTCCCTCGCAACGC
TCGGTTATCGCCACGCGGAAATCGCCCACTACGCCACCCAGTCGCAGGAGGCCTTCCTGCGCCGTGCCGCACGCGGCAAC
GTTAATGCCAAGCCCGACAAGTACAACGCCACCTATTATGGGATGTTCGATCGCAATGAGACGGCGCAAACCGGGCTTCT
GACCGCTGCCGAGGCCACCCGTGCGCGGGTGACGGGCTACCTCTCCGACCCCGCGCTCAGCGCGCTCCATGACCGCGCGA
TGAACTGGCACGCCCTGGCGCGGGAGGCGATGCGCGCGCGGGCCTCTCACGCCGCTGACCTGGCCGCCCTGAACACGGCA
GCCGTCATCCCCTTCGCGGCGTTGGATGACGTCCTCTTCCCGCAACCCCTTGCGCCAGAAGGCAAAGCCATGGTCGCCCG
GATGCAAGCCCAGGGGGTGCCGGACCTTCAGATCGCCCGCGCCGTCGCCCAATCTGTGCAGAAGCTGGAGGCCCTCCGTG
ATGCCCGGGATGCGGCCGAGTTGAACGCCATGGGTGTCACGCCGGACCACGAACGCTGGGGCTAG

Upstream 100 bases:

>100_bases
GACGCTGCACGGGCTGACGGACGCGCAGGCATTGGCGCTGGAGGCCGAAGGGGGCCTGCTGCGCGACGGGCCGAAGGTCC
TGGATCTGGGCGGGTAGATC

Downstream 100 bases:

>100_bases
ACCGGCGCGCACATTGTCAGAGGTCCGCGCGACGCTCCGCCTTCATCTTGGCAAATACAACTCAATCCGAACCCATCCCC
CTTGTGCTGCGGGAGGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MAGRTIVTMMKDEAPFLLHWIAHHRLIGFDRIVVFTNDCSDGTDAMLDRLERMGEVTHRRNTVPDGGKPQPLALRRAGKL
AEVTGSDWLIALDVDEYVHVKVGGGHLDDLLATAPEADGVALTWRMMGSNGLTGWTDTPVTEAYTRGAPDLFRKGWGVKT
LFQPFDQMKLGIHRPTVKGRDKAALAQRAWVNGSAKPMTRGFMEGMWRSSLATLGYRHAEIAHYATQSQEAFLRRAARGN
VNAKPDKYNATYYGMFDRNETAQTGLLTAAEATRARVTGYLSDPALSALHDRAMNWHALAREAMRARASHAADLAALNTA
AVIPFAALDDVLFPQPLAPEGKAMVARMQAQGVPDLQIARAVAQSVQKLEALRDARDAAELNAMGVTPDHERWG

Sequences:

>Translated_394_residues
MAGRTIVTMMKDEAPFLLHWIAHHRLIGFDRIVVFTNDCSDGTDAMLDRLERMGEVTHRRNTVPDGGKPQPLALRRAGKL
AEVTGSDWLIALDVDEYVHVKVGGGHLDDLLATAPEADGVALTWRMMGSNGLTGWTDTPVTEAYTRGAPDLFRKGWGVKT
LFQPFDQMKLGIHRPTVKGRDKAALAQRAWVNGSAKPMTRGFMEGMWRSSLATLGYRHAEIAHYATQSQEAFLRRAARGN
VNAKPDKYNATYYGMFDRNETAQTGLLTAAEATRARVTGYLSDPALSALHDRAMNWHALAREAMRARASHAADLAALNTA
AVIPFAALDDVLFPQPLAPEGKAMVARMQAQGVPDLQIARAVAQSVQKLEALRDARDAAELNAMGVTPDHERWG
>Mature_393_residues
AGRTIVTMMKDEAPFLLHWIAHHRLIGFDRIVVFTNDCSDGTDAMLDRLERMGEVTHRRNTVPDGGKPQPLALRRAGKLA
EVTGSDWLIALDVDEYVHVKVGGGHLDDLLATAPEADGVALTWRMMGSNGLTGWTDTPVTEAYTRGAPDLFRKGWGVKTL
FQPFDQMKLGIHRPTVKGRDKAALAQRAWVNGSAKPMTRGFMEGMWRSSLATLGYRHAEIAHYATQSQEAFLRRAARGNV
NAKPDKYNATYYGMFDRNETAQTGLLTAAEATRARVTGYLSDPALSALHDRAMNWHALAREAMRARASHAADLAALNTAA
VIPFAALDDVLFPQPLAPEGKAMVARMQAQGVPDLQIARAVAQSVQKLEALRDARDAAELNAMGVTPDHERWG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43204; Mature: 43073

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRTIVTMMKDEAPFLLHWIAHHRLIGFDRIVVFTNDCSDGTDAMLDRLERMGEVTHRR
CCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHC
NTVPDGGKPQPLALRRAGKLAEVTGSDWLIALDVDEYVHVKVGGGHLDDLLATAPEADGV
CCCCCCCCCCCHHHHHCCCEEEECCCCEEEEEECCCEEEEEECCCCHHHHHHCCCCCCCE
ALTWRMMGSNGLTGWTDTPVTEAYTRGAPDLFRKGWGVKTLFQPFDQMKLGIHRPTVKGR
EEEEEEECCCCCCCCCCCCCHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC
DKAALAQRAWVNGSAKPMTRGFMEGMWRSSLATLGYRHAEIAHYATQSQEAFLRRAARGN
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
VNAKPDKYNATYYGMFDRNETAQTGLLTAAEATRARVTGYLSDPALSALHDRAMNWHALA
CCCCCCCCCCEEEEECCCCCCHHHHHEEHHHHHHHHHEEECCCHHHHHHHHHHCCHHHHH
REAMRARASHAADLAALNTAAVIPFAALDDVLFPQPLAPEGKAMVARMQAQGVPDLQIAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHH
AVAQSVQKLEALRDARDAAELNAMGVTPDHERWG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AGRTIVTMMKDEAPFLLHWIAHHRLIGFDRIVVFTNDCSDGTDAMLDRLERMGEVTHRR
CCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHC
NTVPDGGKPQPLALRRAGKLAEVTGSDWLIALDVDEYVHVKVGGGHLDDLLATAPEADGV
CCCCCCCCCCCHHHHHCCCEEEECCCCEEEEEECCCEEEEEECCCCHHHHHHCCCCCCCE
ALTWRMMGSNGLTGWTDTPVTEAYTRGAPDLFRKGWGVKTLFQPFDQMKLGIHRPTVKGR
EEEEEEECCCCCCCCCCCCCHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC
DKAALAQRAWVNGSAKPMTRGFMEGMWRSSLATLGYRHAEIAHYATQSQEAFLRRAARGN
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
VNAKPDKYNATYYGMFDRNETAQTGLLTAAEATRARVTGYLSDPALSALHDRAMNWHALA
CCCCCCCCCCEEEEECCCCCCHHHHHEEHHHHHHHHHEEECCCHHHHHHHHHHCCHHHHH
REAMRARASHAADLAALNTAAVIPFAALDDVLFPQPLAPEGKAMVARMQAQGVPDLQIAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHH
AVAQSVQKLEALRDARDAAELNAMGVTPDHERWG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA