| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89055753
Identifier: 89055753
GI number: 89055753
Start: 3314139
End: 3315983
Strand: Direct
Name: 89055753
Synonym: Jann_3262
Alternate gene names: NA
Gene position: 3314139-3315983 (Clockwise)
Preceding gene: 89055750
Following gene: 89055754
Centisome position: 76.75
GC content: 60.6
Gene sequence:
>1845_bases ATGGCGAAACGACACCGGCGAACCGGGGATACAGGGCACGTGCAGCACCTCAAGACCAGCTCCAAACATGGCGACGTGCT CGCCGTGTCGATGATGAAGGATGAGGCCCCGTTCCTTCTGGAATGGGTCGCGCATCATCTGGCGGTGGGCTTCACGGATA TCCTTGTCTACACCAACGATTGCTCGGACGGCACCGACACGATGCTGCAACGGCTGGAAGAGCTTGGCCTTTGTCATCAT CGCGAAAACATCATCGCGGAGGGCATCAAACCGCAACCCTCTGCCCTGAAACATGCGCAGGCCGAACCAATTGTGCGGCA GGCCGACTGGGTGCTGGTCTTCGATGCGGACGAGTTTTTGTGTGTGCGCCATCCTTCCCATTCCGTCGAAGGGATGTTGG ATGATGCGGTCGCCCAAGGGGCCACTGGCATCGTGATCACATGGCGGATCTATGGCTCCGGTGGGGTGGTCGACTGGTCC AGTGACCCGGTGACCGAGCAATATATTCGCGCGGCCCCGCCCCTTTGGAACAAGGGCTGGGGCGTGAAGACCCTGTTCAA ATTCGATGCCAAATACTGGAAGCTCGGCATCCACCGCCCGTCGATCAAGAACAAATGGCTGGAAACGGACTTCCCCGACA GCGTGACATGGCTCAACGGCTCCGGTCGCCCAATGGAAGATTATTTCAAGTTCCGCGGCTGGCGCTCCATCCGGCGCACG GTGGGCTACGACTGGGCCCAGATGAACCACTATGCCGTCAAGTCCGTGGATGCCTATGCCGTGCGCAAGTTTCGCGGCAA TGTGAACAACAAGAAAGACAAGTATAACAACGACTATTGGTCGCTTCAGGACCGCAATGAGGTGGAAGATCAGGCCGCCC TGATCCATGCCGAAAAGCGCGCTGACATCATGACCGAATTGTTGAAGGACCCGGTGCTGAACGAATTGCACTTCGCAGCA CTCGACCGGGTTGAGGCGCGCCTGGATGCGTATCGCAAGACCGACGCCTATGCCGAGTTGCGAGAAGGGTTGATCGCGGC GGGCAAGGTGCCGATCACCCAGATCGAGGCCAAGCCACCCAAGGCCCGCGACCCCGCCAAGATCGCTGCGCTGATGAGCC GGGTGGAGAAGGACGCCGCCGCCAAGCCGATAGAGGAGCGGCGCAGTGACACCATTGCAGGATGGGCCGCGTCAGACGGG GATCCTTACGTGCAGGGGGATATCGACATCTCAGGTGAGATCGGGCTGGAATGGGTGGAAAACCACGGGATCGAGCTGCC CGCCGATCCGCGCGTGTTCTCGCCCGAAAGCCTCGACGCGATCATTCTGAGCCGGTTTGAACGTCGCCACGCGCGCAACA TTGCAGGATATCTGGAAAATTGCCCCCGCGTGCTGGAGATTGGGGCCGGCATCGGCTTCATCGGTATGCGCATGGTCAAG ATGAGCGAGGGCCTTGTTTACATGGCCCAGGACGGTCGCGCACCGCTTGTGCGTTATGGGCGCGACCTGGCCGGGCGGGC GGATGTGGCCAGTGATCGGTTGAAGTTCACTGATGGGCCGCTGGTCTTTCCGGGGGATTGGGCGGCGCAGGCCAGCGGGC TCGCGGCTTATCTGGCGGATTTCAAACCGGATGCTCTGCGGATCGGGCGCGCGTCGGATCTGCCCGCAGAGATCCTGGCC AATCAGGACCTCATTGGCCTGTCGCGCATCATCATCCCTGTGATTTCTGATGCACAGGCCGATGCGTACCGCGCTGATTA CGCGCCCGTTCTGACCGACAAGGGTTTTCAGGAGGATCCTGACCGCGCCAGCGCAGGGTCTTTGCAATTCAATCGCGCGT CCTGA
Upstream 100 bases:
>100_bases TGGGTCCGCGCGCGGGATCTGTAAAGGGCACACTGATCGGATTATCCCGGTCCGCAGGCCGCCTGCGCCCGGTTCAAATG CGGGACAGGGCGTGATATCC
Downstream 100 bases:
>100_bases CATGTCAGGGCTTGGCGCGGCGCACGGGCGTGGCTAGCCTGCGCTGAACAAAGGGGGCCGCGCGTGGCAGACACGTCTGA TGAGAATGACCTGACGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 614; Mature: 613
Protein sequence:
>614_residues MAKRHRRTGDTGHVQHLKTSSKHGDVLAVSMMKDEAPFLLEWVAHHLAVGFTDILVYTNDCSDGTDTMLQRLEELGLCHH RENIIAEGIKPQPSALKHAQAEPIVRQADWVLVFDADEFLCVRHPSHSVEGMLDDAVAQGATGIVITWRIYGSGGVVDWS SDPVTEQYIRAAPPLWNKGWGVKTLFKFDAKYWKLGIHRPSIKNKWLETDFPDSVTWLNGSGRPMEDYFKFRGWRSIRRT VGYDWAQMNHYAVKSVDAYAVRKFRGNVNNKKDKYNNDYWSLQDRNEVEDQAALIHAEKRADIMTELLKDPVLNELHFAA LDRVEARLDAYRKTDAYAELREGLIAAGKVPITQIEAKPPKARDPAKIAALMSRVEKDAAAKPIEERRSDTIAGWAASDG DPYVQGDIDISGEIGLEWVENHGIELPADPRVFSPESLDAIILSRFERRHARNIAGYLENCPRVLEIGAGIGFIGMRMVK MSEGLVYMAQDGRAPLVRYGRDLAGRADVASDRLKFTDGPLVFPGDWAAQASGLAAYLADFKPDALRIGRASDLPAEILA NQDLIGLSRIIIPVISDAQADAYRADYAPVLTDKGFQEDPDRASAGSLQFNRAS
Sequences:
>Translated_614_residues MAKRHRRTGDTGHVQHLKTSSKHGDVLAVSMMKDEAPFLLEWVAHHLAVGFTDILVYTNDCSDGTDTMLQRLEELGLCHH RENIIAEGIKPQPSALKHAQAEPIVRQADWVLVFDADEFLCVRHPSHSVEGMLDDAVAQGATGIVITWRIYGSGGVVDWS SDPVTEQYIRAAPPLWNKGWGVKTLFKFDAKYWKLGIHRPSIKNKWLETDFPDSVTWLNGSGRPMEDYFKFRGWRSIRRT VGYDWAQMNHYAVKSVDAYAVRKFRGNVNNKKDKYNNDYWSLQDRNEVEDQAALIHAEKRADIMTELLKDPVLNELHFAA LDRVEARLDAYRKTDAYAELREGLIAAGKVPITQIEAKPPKARDPAKIAALMSRVEKDAAAKPIEERRSDTIAGWAASDG DPYVQGDIDISGEIGLEWVENHGIELPADPRVFSPESLDAIILSRFERRHARNIAGYLENCPRVLEIGAGIGFIGMRMVK MSEGLVYMAQDGRAPLVRYGRDLAGRADVASDRLKFTDGPLVFPGDWAAQASGLAAYLADFKPDALRIGRASDLPAEILA NQDLIGLSRIIIPVISDAQADAYRADYAPVLTDKGFQEDPDRASAGSLQFNRAS >Mature_613_residues AKRHRRTGDTGHVQHLKTSSKHGDVLAVSMMKDEAPFLLEWVAHHLAVGFTDILVYTNDCSDGTDTMLQRLEELGLCHHR ENIIAEGIKPQPSALKHAQAEPIVRQADWVLVFDADEFLCVRHPSHSVEGMLDDAVAQGATGIVITWRIYGSGGVVDWSS DPVTEQYIRAAPPLWNKGWGVKTLFKFDAKYWKLGIHRPSIKNKWLETDFPDSVTWLNGSGRPMEDYFKFRGWRSIRRTV GYDWAQMNHYAVKSVDAYAVRKFRGNVNNKKDKYNNDYWSLQDRNEVEDQAALIHAEKRADIMTELLKDPVLNELHFAAL DRVEARLDAYRKTDAYAELREGLIAAGKVPITQIEAKPPKARDPAKIAALMSRVEKDAAAKPIEERRSDTIAGWAASDGD PYVQGDIDISGEIGLEWVENHGIELPADPRVFSPESLDAIILSRFERRHARNIAGYLENCPRVLEIGAGIGFIGMRMVKM SEGLVYMAQDGRAPLVRYGRDLAGRADVASDRLKFTDGPLVFPGDWAAQASGLAAYLADFKPDALRIGRASDLPAEILAN QDLIGLSRIIIPVISDAQADAYRADYAPVLTDKGFQEDPDRASAGSLQFNRAS
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68500; Mature: 68369
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRHRRTGDTGHVQHLKTSSKHGDVLAVSMMKDEAPFLLEWVAHHLAVGFTDILVYTND CCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCEEEEEEEECC CSDGTDTMLQRLEELGLCHHRENIIAEGIKPQPSALKHAQAEPIVRQADWVLVFDADEFL CCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHCCCCCHHCCCCEEEEECCCCEE CVRHPSHSVEGMLDDAVAQGATGIVITWRIYGSGGVVDWSSDPVTEQYIRAAPPLWNKGW EEECCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEEECCCCCHHHHHHHHCCCCCCCCC GVKTLFKFDAKYWKLGIHRPSIKNKWLETDFPDSVTWLNGSGRPMEDYFKFRGWRSIRRT CHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH VGYDWAQMNHYAVKSVDAYAVRKFRGNVNNKKDKYNNDYWSLQDRNEVEDQAALIHAEKR HCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ADIMTELLKDPVLNELHFAALDRVEARLDAYRKTDAYAELREGLIAAGKVPITQIEAKPP HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEEECCCCC KARDPAKIAALMSRVEKDAAAKPIEERRSDTIAGWAASDGDPYVQGDIDISGEIGLEWVE CCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCCEEEECEEECCCCCCEEHH NHGIELPADPRVFSPESLDAIILSRFERRHARNIAGYLENCPRVLEIGAGIGFIGMRMVK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHH MSEGLVYMAQDGRAPLVRYGRDLAGRADVASDRLKFTDGPLVFPGDWAAQASGLAAYLAD HCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCHHHHHCCHHHHHHH FKPDALRIGRASDLPAEILANQDLIGLSRIIIPVISDAQADAYRADYAPVLTDKGFQEDP CCCCCEECCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCHHCCCCCCCCC DRASAGSLQFNRAS CCCCCCCCEECCCC >Mature Secondary Structure AKRHRRTGDTGHVQHLKTSSKHGDVLAVSMMKDEAPFLLEWVAHHLAVGFTDILVYTND CCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCEEEEEEEECC CSDGTDTMLQRLEELGLCHHRENIIAEGIKPQPSALKHAQAEPIVRQADWVLVFDADEFL CCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHCCCCCHHCCCCEEEEECCCCEE CVRHPSHSVEGMLDDAVAQGATGIVITWRIYGSGGVVDWSSDPVTEQYIRAAPPLWNKGW EEECCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEEECCCCCHHHHHHHHCCCCCCCCC GVKTLFKFDAKYWKLGIHRPSIKNKWLETDFPDSVTWLNGSGRPMEDYFKFRGWRSIRRT CHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH VGYDWAQMNHYAVKSVDAYAVRKFRGNVNNKKDKYNNDYWSLQDRNEVEDQAALIHAEKR HCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ADIMTELLKDPVLNELHFAALDRVEARLDAYRKTDAYAELREGLIAAGKVPITQIEAKPP HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEEECCCCC KARDPAKIAALMSRVEKDAAAKPIEERRSDTIAGWAASDGDPYVQGDIDISGEIGLEWVE CCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCCEEEECEEECCCCCCEEHH NHGIELPADPRVFSPESLDAIILSRFERRHARNIAGYLENCPRVLEIGAGIGFIGMRMVK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHH MSEGLVYMAQDGRAPLVRYGRDLAGRADVASDRLKFTDGPLVFPGDWAAQASGLAAYLAD HCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCHHHHHCCHHHHHHH FKPDALRIGRASDLPAEILANQDLIGLSRIIIPVISDAQADAYRADYAPVLTDKGFQEDP CCCCCEECCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCHHCCCCCCCCC DRASAGSLQFNRAS CCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA