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The map label for this gene is 89055730

Identifier: 89055730

GI number: 89055730

Start: 3287293

End: 3288705

Strand: Direct

Name: 89055730

Synonym: Jann_3239

Alternate gene names: NA

Gene position: 3287293-3288705 (Clockwise)

Preceding gene: 89055729

Following gene: 89055731

Centisome position: 76.13

GC content: 63.41

Gene sequence:

>1413_bases
ATGACCCAATCGCCCGATCTGCAAGCCGTCCTCGACTATGCGGACGCGCACATGAACGACAGCCTTGCGCGGCTATTTGA
CCTCGTGCGCATACCGTCCGTTTCGACAGTTCCGGCCCATGCGGGTGACTGTCGCGCTGCGGCCCAATGGTTGTCTGATC
AGTTGAACGATCTGGGTTTTGATGCCTCGGTCCGCCCGACCGGCGGCCACCCGATGGTCGTGGCGCATCAGACCGACGCG
GATGGTCCCCACGTGTTATTTTACGGCCATTACGACGTTCAGCCCGTCGTTCCGCTGGAGCTGTGGAAGACCGATCCGTT
TGAGCCAACGCTTGAACCGCAGCCAAACGGCGACACCCACATCACCGGGCGCGGGGCCTCCGACGACAAGGGCCAGCTGC
TGACCTTCATCGAGGCGTGCCGCGCGTGGAAAGCGGTCACCGGACGCCTGCCCATCAAGGTCTCCATGCTGTTTGAGGGG
GAGGAGGAGTCCGGCTCCCAAAGCCTCGGGCCGTTTTTGGAGCAGACGGCAGAGGAGCTGCGCGCAGACGTCATGATGGT
CTGTGACACCGATATGTGGGACCGTGACACGCCCGCGATCACGACAATGCTACGCGGTTTGGTGGGGGAGGAATTCACCA
TCACAACCGCAGACCGGGACTTGCATTCGGGCATGTTTGGAAACGCCGCACGCAATGCGTTGCAGGTGGCGTCCGATGCC
ATAGCGGGTCTGCGCGGGCCCGACGGCGGCGTGACATTGCCCGGATTCTACGACGGCGTTGAAGATCTTGCACCCGAGAT
CAAGGCGCAGTGGAAGAGCCTGCCGTTCGACCAGGAGGGTTTCCTGTCTGACGTAGGCCTCAGCCTGCCAGCAGGAGAGG
ACGCCTATTCCATCATGGAGCAGATCTGGGCCCGACCCAGTTGCGAAATCCACGGCGTGATCGGCGGCTACACGGACGAG
GGCTTCAAGACAGTCATTCCAGCGAAAGCCACGGCCAAGGTCTCGTTCCGACTGGTGGCGGGCCAGGATCCCGCGCGCAT
CCGCGAGGCGTTCCGCGCCCATATCCGCGCCTATGTGCCCAAGGATTGCTCGGTCGAATTCACGTCCCATGGGGCGAGCC
CGGCCTTGTCCCTGCCGCTCGACAGCCCCTACCTGACAGCGACCCGCGAAGCGCTGAGCCAGGAATGGGGCACGGAGGCT
GCGCTGGCCGGAACCGGCGGATCGATCCCCATCGTCGGCGAATTCAAACGTCAATTGGGGATGGATACGCTGCTGGTGGG
CTTTGCCCGCTTCGACAACCGCATCCACAGCCCGAACGAGAAGTACGACCTGTCCAGCTTCACCGGCGGCATCCGGTCGT
TCGTCCGCGTGCTGGCGGCCCTTTCTGAGATTGAGGCGGCCGCTGCCCCATGA

Upstream 100 bases:

>100_bases
GAACCCGCGCGCGTACTGGCCGATGCCAATCAGGTGGCCGGACAATTCCGCACTGAGATTGCCGCCATAGATGCCGCGAT
GGCTGTCAAAGGATGATGCC

Downstream 100 bases:

>100_bases
CACGTCCGGTGTTGATCGACACCGATCCCGGGCTCGACGACGCTGTGGGCATTCTGATGGCGCTGGCCGATCCGCGACTG
GACGTTCGCGCCGTAACCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase; M20/M25/M40 Family Peptidase; ArgE/DapE/Acy1 Family Protein; Peptidase Family; Succinyl-Diaminopimelate Desuccinylase; Beta-Ala-His Dipeptidase; Succinyl-Diaminopimelate Desuccinylase Protein; Peptidase Dimerisation Domain-Containing Protein; Deacylase; Zinc Metallopeptidase; M20 Family Peptidase; Peptidase Dimerization Domain Protein; N-Acyl-L-Amino Acid Amidohydrolase; Peptidase Dimerisation Domain Protein; Acetylornithine Deacetylase ArgE; Metallopeptidase; N-Succinyl-Diaminopimelate Deacylase; ArgE/DapE/Acy1 Family Peptidase; Nonspecific Dipeptidase; Peptidase Dimerisation

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MTQSPDLQAVLDYADAHMNDSLARLFDLVRIPSVSTVPAHAGDCRAAAQWLSDQLNDLGFDASVRPTGGHPMVVAHQTDA
DGPHVLFYGHYDVQPVVPLELWKTDPFEPTLEPQPNGDTHITGRGASDDKGQLLTFIEACRAWKAVTGRLPIKVSMLFEG
EEESGSQSLGPFLEQTAEELRADVMMVCDTDMWDRDTPAITTMLRGLVGEEFTITTADRDLHSGMFGNAARNALQVASDA
IAGLRGPDGGVTLPGFYDGVEDLAPEIKAQWKSLPFDQEGFLSDVGLSLPAGEDAYSIMEQIWARPSCEIHGVIGGYTDE
GFKTVIPAKATAKVSFRLVAGQDPARIREAFRAHIRAYVPKDCSVEFTSHGASPALSLPLDSPYLTATREALSQEWGTEA
ALAGTGGSIPIVGEFKRQLGMDTLLVGFARFDNRIHSPNEKYDLSSFTGGIRSFVRVLAALSEIEAAAAP

Sequences:

>Translated_470_residues
MTQSPDLQAVLDYADAHMNDSLARLFDLVRIPSVSTVPAHAGDCRAAAQWLSDQLNDLGFDASVRPTGGHPMVVAHQTDA
DGPHVLFYGHYDVQPVVPLELWKTDPFEPTLEPQPNGDTHITGRGASDDKGQLLTFIEACRAWKAVTGRLPIKVSMLFEG
EEESGSQSLGPFLEQTAEELRADVMMVCDTDMWDRDTPAITTMLRGLVGEEFTITTADRDLHSGMFGNAARNALQVASDA
IAGLRGPDGGVTLPGFYDGVEDLAPEIKAQWKSLPFDQEGFLSDVGLSLPAGEDAYSIMEQIWARPSCEIHGVIGGYTDE
GFKTVIPAKATAKVSFRLVAGQDPARIREAFRAHIRAYVPKDCSVEFTSHGASPALSLPLDSPYLTATREALSQEWGTEA
ALAGTGGSIPIVGEFKRQLGMDTLLVGFARFDNRIHSPNEKYDLSSFTGGIRSFVRVLAALSEIEAAAAP
>Mature_469_residues
TQSPDLQAVLDYADAHMNDSLARLFDLVRIPSVSTVPAHAGDCRAAAQWLSDQLNDLGFDASVRPTGGHPMVVAHQTDAD
GPHVLFYGHYDVQPVVPLELWKTDPFEPTLEPQPNGDTHITGRGASDDKGQLLTFIEACRAWKAVTGRLPIKVSMLFEGE
EESGSQSLGPFLEQTAEELRADVMMVCDTDMWDRDTPAITTMLRGLVGEEFTITTADRDLHSGMFGNAARNALQVASDAI
AGLRGPDGGVTLPGFYDGVEDLAPEIKAQWKSLPFDQEGFLSDVGLSLPAGEDAYSIMEQIWARPSCEIHGVIGGYTDEG
FKTVIPAKATAKVSFRLVAGQDPARIREAFRAHIRAYVPKDCSVEFTSHGASPALSLPLDSPYLTATREALSQEWGTEAA
LAGTGGSIPIVGEFKRQLGMDTLLVGFARFDNRIHSPNEKYDLSSFTGGIRSFVRVLAALSEIEAAAAP

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI271398239, Length=478, Percent_Identity=27.8242677824268, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI21071039, Length=478, Percent_Identity=27.8242677824268, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI271398277, Length=360, Percent_Identity=27.7777777777778, Blast_Score=146, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI17563146, Length=473, Percent_Identity=29.1754756871036, Blast_Score=191, Evalue=9e-49,
Organism=Caenorhabditis elegans, GI193211059, Length=480, Percent_Identity=29.375, Blast_Score=186, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6321159, Length=481, Percent_Identity=30.5613305613306, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6319758, Length=481, Percent_Identity=23.7006237006237, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24585880, Length=472, Percent_Identity=31.3559322033898, Blast_Score=222, Evalue=5e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50719; Mature: 50588

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSPDLQAVLDYADAHMNDSLARLFDLVRIPSVSTVPAHAGDCRAAAQWLSDQLNDLGF
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
DASVRPTGGHPMVVAHQTDADGPHVLFYGHYDVQPVVPLELWKTDPFEPTLEPQPNGDTH
CCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCE
ITGRGASDDKGQLLTFIEACRAWKAVTGRLPIKVSMLFEGEEESGSQSLGPFLEQTAEEL
EECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHH
RADVMMVCDTDMWDRDTPAITTMLRGLVGEEFTITTADRDLHSGMFGNAARNALQVASDA
HHCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHH
IAGLRGPDGGVTLPGFYDGVEDLAPEIKAQWKSLPFDQEGFLSDVGLSLPAGEDAYSIME
HHCCCCCCCCEECCCHHCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHH
QIWARPSCEIHGVIGGYTDEGFKTVIPAKATAKVSFRLVAGQDPARIREAFRAHIRAYVP
HHHCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCC
KDCSVEFTSHGASPALSLPLDSPYLTATREALSQEWGTEAALAGTGGSIPIVGEFKRQLG
CCCCEEECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHC
MDTLLVGFARFDNRIHSPNEKYDLSSFTGGIRSFVRVLAALSEIEAAAAP
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQSPDLQAVLDYADAHMNDSLARLFDLVRIPSVSTVPAHAGDCRAAAQWLSDQLNDLGF
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
DASVRPTGGHPMVVAHQTDADGPHVLFYGHYDVQPVVPLELWKTDPFEPTLEPQPNGDTH
CCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCE
ITGRGASDDKGQLLTFIEACRAWKAVTGRLPIKVSMLFEGEEESGSQSLGPFLEQTAEEL
EECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHH
RADVMMVCDTDMWDRDTPAITTMLRGLVGEEFTITTADRDLHSGMFGNAARNALQVASDA
HHCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHH
IAGLRGPDGGVTLPGFYDGVEDLAPEIKAQWKSLPFDQEGFLSDVGLSLPAGEDAYSIME
HHCCCCCCCCEECCCHHCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHH
QIWARPSCEIHGVIGGYTDEGFKTVIPAKATAKVSFRLVAGQDPARIREAFRAHIRAYVP
HHHCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCC
KDCSVEFTSHGASPALSLPLDSPYLTATREALSQEWGTEAALAGTGGSIPIVGEFKRQLG
CCCCEEECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHC
MDTLLVGFARFDNRIHSPNEKYDLSSFTGGIRSFVRVLAALSEIEAAAAP
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA