| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055668
Identifier: 89055668
GI number: 89055668
Start: 3216696
End: 3219434
Strand: Direct
Name: 89055668
Synonym: Jann_3177
Alternate gene names: NA
Gene position: 3216696-3219434 (Clockwise)
Preceding gene: 89055660
Following gene: 89055671
Centisome position: 74.5
GC content: 64.29
Gene sequence:
>2739_bases ATGAGCGACGAAAACAAGATCCTGACGGTCTCCTACGGCACATTTTCCTGTACCCTAGAGGGATTTGATCGCCCGTTCGA GGCGATGAAAGCGATCGCGGAGTATTTTCGCGATCTGGCTGCTGAAGACCGCTATTTCGGGGCCGAACCCCCGACCCCGG ATGCTGACACCCTGCACCGCATCACCGAGGCCGCGATTGAGCGCCGCGTGGAAGCCCGCGTGCTTGAGACGGGTATGATC ATGCGTCCCGAAGGTGCCGCCGCCGAAGATACCCCCGCCTTCATGAGCGCAAGCCTTGATGCGGGTCTGCACATTGAAGA TGCCATCGAAAGCGTCGTGCCCGAAGCCGAAATCGAGGTGGAGGGTCTGGACGACACCCCTGCTGATGTCGCCGTGGAAG AGATGGCTCAGGAGGACGCGGACACCACGGATGAAGCCGAGGCTATCGAAGCGGATGACACCGTCGCCGAAGACGACAAT GCCGATGATGTTGAAGACGCCCAAGCTGACGGCCCTGACGCTGAGGTCCCGGACGCTGCCATAGCGGTCACTGAGACGGC CAAAACCGGCGATGAAGGCGCTGACGAGGCGGACAAGGTGGCAGATGTCGACGCGGCCGAGATCGCGGACGACGAAGACA CGCCCCTGGGCGCCACAGAGGACGCGTCGGACGAGGATACCCTGGCCGGGATCACCGCGCCCATCGCTATCGACGATATG GACGCCGAAGATGAGTCCGAGATCCTGGCCGACGACATTGAAGAGGCAGTCGGTTCGGTAGACATCGAAGCAGAAAACAC CGCATCAGAAGACGTCAACGCTGACGACCCTGAGGCCGAAGCTGCCCGTGTCGGCGACGACATTGTGGCCCATGACGCGC CTGCCGCCGATGAAGGTGAGGCCGGTGCCGATACGCTGATCGCGGTCGCCGCTGCCATGGCGGCGGGTCATGCAACCGCC GACGATGCGGACGGTAATGACGCTGAAAGTTTCGCTGAAATTCCTTCGGAGGAGACAACCGATGACGGCGATTGGCAGAA TGTTGCCGATCTGGACGAGGATGCTGACGACATTGCCGATAGCGACGTCGATAGCCTTTTTGCCGAAGAGCCCGACGGTG ACGATGCCTTCGACGGAGCGTCTGTTGCCGCCCGTCTGGCCCGCATTCGCCGCGCCTCGCTGGTCGATGGCGACGAGGCT GTCGAAACGGTGCAACCTGATGATGAGTTGATTTCGGCCGGCGGCGAAGGGGCCGCGCCCGAGCCCGTACTCGAAACTGA CGATGAGACCGCCGTGGCGGCCCTCACCGCCGCCTTCGCCACGGAGGAAACGACTTCGGATGCTGTGTCCGAAGACGCCG AGATCGCCCCGACCGAGGATGCTGCATCGGACGAGGCACCGGATGCGGAAGCGCACGGCGACGACGAGGACGCCACCCTG GCCCTCATCGCGGCGGCGACCGGATCCGAGACGGACTTCGAAACCGAGGTCAAGGATGAGGCGGACGCCGAGCCTGAGAC GGACGATGACATTAACGTGGAGGCCTCGTCGGAGGACGAGGTTGAAGATGCCGCGCCCGACGCGGACGATGGAGATGTCG ACCGCCTGTTCGACGCCACCGAGGGGCGGCTTGCAACCGTGGAAACCACCCGCCGCCGCGCCAATATCGAGCATCTCAAG GCAGCCGTCGCCGCCCGCGCGGCCGACACGCAGCTTGCCGCCGATGGCTCTACCGCCGCCGAGTTGGCGGGCGTCACGGA TACCACCGCCGAATACCGCGATGATCTGGCCCGTGTGATGCGCCCCCGTCGGGTTCGTGTCGACGTCTCGCGCCGCCGTG AGGTCGAAGAGACGCGCCCCGCGCCGCTGGTGCTTGTGTCCGAGCAGCGCATTGACCTTGATGCCGGGGCGAGCGGGTCG GACAGCGCGAACATCATGCCGCGCCGGATCGCACGGACGGAAACCGAAACCAGCCCGACGCTGCGCCCGATGCCGATCCT GCAACGCGCGCCGGAAACGTCTACGCTTGTGTTGGAATCGCCGGAAACCGCTGAAGCGCCTGAGATTGACGTCGAAGCGC TGCAGAAATCCCGCCCTGCCCCGCGCAAGATGGTGAGCTCTCTGGCAAACCTTGCCCAAAGGGCCGGTCAGATCGCGATG GGCCTGAACCGCCCCGCGCCGGTGGCCGTCGAAGAAGACCCGACCGAGGACGAGGCGATGGAAGACGACACCGCCGCACT GTCCGAGCCAACCGGAGAATTGACCGAGGAGCCGACATCGGACGTGACGCCAGACGTGGCTGACGATCCGGCACCCGAGG CCGATACGCAGCCTGCACCGGCCATCGCGGAGAACGGGCCGAACGAAGAGGACGAAGATCCAATTGCCGCGCTGGAGGCG CAGCTGGCCCAGGAAATCGACGAAGAAGCCCGGGAAGAGGCGTCGGCTGCCGCAGCGGAGGCCGATGACGACGTCGATCA CTTTGCCCGATTTGCAGAGGTCCTGGACAATTCACCGGCGACCGAGATCGAGGAAGTCGTTGAAATGGGTGCAGATTACC TGACCAACGAGGCGGGCCTGCCGGAGTTCAAGCGCATGCAATTGCTGCGTCTGGTGCGGATCGCAACCGACGGATCGATC TCGCGCTCGGAAGCCATCGCGGCCGTGGACCAGTTGACCGATGACAATGTGCTGGAAGCCCTTGGGGGCAACCAGTACCG GATGCGTCGCGGGATCTGA
Upstream 100 bases:
>100_bases GGAAACAGTTTGTTACACATTTCGTGACGATGATAATTCCGGTTAGGCCCGGACAAAGTAGACTTCCGGGATCAATCCGG ACGAGCAGAGTGGCAGAGCA
Downstream 100 bases:
>100_bases TCCCGCACAAATCACAAGCAAAAGGGCGCCGCAACGGGCGCCCTTTTCGTATGGTCAGCGTCCGGGCATTCAGGGACCGC TAATCCTCAGGCGCGTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: CheA Signal Transduction Histidine Kinase; CheA Signal Transduction Histidine Kinases
Number of amino acids: Translated: 912; Mature: 911
Protein sequence:
>912_residues MSDENKILTVSYGTFSCTLEGFDRPFEAMKAIAEYFRDLAAEDRYFGAEPPTPDADTLHRITEAAIERRVEARVLETGMI MRPEGAAAEDTPAFMSASLDAGLHIEDAIESVVPEAEIEVEGLDDTPADVAVEEMAQEDADTTDEAEAIEADDTVAEDDN ADDVEDAQADGPDAEVPDAAIAVTETAKTGDEGADEADKVADVDAAEIADDEDTPLGATEDASDEDTLAGITAPIAIDDM DAEDESEILADDIEEAVGSVDIEAENTASEDVNADDPEAEAARVGDDIVAHDAPAADEGEAGADTLIAVAAAMAAGHATA DDADGNDAESFAEIPSEETTDDGDWQNVADLDEDADDIADSDVDSLFAEEPDGDDAFDGASVAARLARIRRASLVDGDEA VETVQPDDELISAGGEGAAPEPVLETDDETAVAALTAAFATEETTSDAVSEDAEIAPTEDAASDEAPDAEAHGDDEDATL ALIAAATGSETDFETEVKDEADAEPETDDDINVEASSEDEVEDAAPDADDGDVDRLFDATEGRLATVETTRRRANIEHLK AAVAARAADTQLAADGSTAAELAGVTDTTAEYRDDLARVMRPRRVRVDVSRRREVEETRPAPLVLVSEQRIDLDAGASGS DSANIMPRRIARTETETSPTLRPMPILQRAPETSTLVLESPETAEAPEIDVEALQKSRPAPRKMVSSLANLAQRAGQIAM GLNRPAPVAVEEDPTEDEAMEDDTAALSEPTGELTEEPTSDVTPDVADDPAPEADTQPAPAIAENGPNEEDEDPIAALEA QLAQEIDEEAREEASAAAAEADDDVDHFARFAEVLDNSPATEIEEVVEMGADYLTNEAGLPEFKRMQLLRLVRIATDGSI SRSEAIAAVDQLTDDNVLEALGGNQYRMRRGI
Sequences:
>Translated_912_residues MSDENKILTVSYGTFSCTLEGFDRPFEAMKAIAEYFRDLAAEDRYFGAEPPTPDADTLHRITEAAIERRVEARVLETGMI MRPEGAAAEDTPAFMSASLDAGLHIEDAIESVVPEAEIEVEGLDDTPADVAVEEMAQEDADTTDEAEAIEADDTVAEDDN ADDVEDAQADGPDAEVPDAAIAVTETAKTGDEGADEADKVADVDAAEIADDEDTPLGATEDASDEDTLAGITAPIAIDDM DAEDESEILADDIEEAVGSVDIEAENTASEDVNADDPEAEAARVGDDIVAHDAPAADEGEAGADTLIAVAAAMAAGHATA DDADGNDAESFAEIPSEETTDDGDWQNVADLDEDADDIADSDVDSLFAEEPDGDDAFDGASVAARLARIRRASLVDGDEA VETVQPDDELISAGGEGAAPEPVLETDDETAVAALTAAFATEETTSDAVSEDAEIAPTEDAASDEAPDAEAHGDDEDATL ALIAAATGSETDFETEVKDEADAEPETDDDINVEASSEDEVEDAAPDADDGDVDRLFDATEGRLATVETTRRRANIEHLK AAVAARAADTQLAADGSTAAELAGVTDTTAEYRDDLARVMRPRRVRVDVSRRREVEETRPAPLVLVSEQRIDLDAGASGS DSANIMPRRIARTETETSPTLRPMPILQRAPETSTLVLESPETAEAPEIDVEALQKSRPAPRKMVSSLANLAQRAGQIAM GLNRPAPVAVEEDPTEDEAMEDDTAALSEPTGELTEEPTSDVTPDVADDPAPEADTQPAPAIAENGPNEEDEDPIAALEA QLAQEIDEEAREEASAAAAEADDDVDHFARFAEVLDNSPATEIEEVVEMGADYLTNEAGLPEFKRMQLLRLVRIATDGSI SRSEAIAAVDQLTDDNVLEALGGNQYRMRRGI >Mature_911_residues SDENKILTVSYGTFSCTLEGFDRPFEAMKAIAEYFRDLAAEDRYFGAEPPTPDADTLHRITEAAIERRVEARVLETGMIM RPEGAAAEDTPAFMSASLDAGLHIEDAIESVVPEAEIEVEGLDDTPADVAVEEMAQEDADTTDEAEAIEADDTVAEDDNA DDVEDAQADGPDAEVPDAAIAVTETAKTGDEGADEADKVADVDAAEIADDEDTPLGATEDASDEDTLAGITAPIAIDDMD AEDESEILADDIEEAVGSVDIEAENTASEDVNADDPEAEAARVGDDIVAHDAPAADEGEAGADTLIAVAAAMAAGHATAD DADGNDAESFAEIPSEETTDDGDWQNVADLDEDADDIADSDVDSLFAEEPDGDDAFDGASVAARLARIRRASLVDGDEAV ETVQPDDELISAGGEGAAPEPVLETDDETAVAALTAAFATEETTSDAVSEDAEIAPTEDAASDEAPDAEAHGDDEDATLA LIAAATGSETDFETEVKDEADAEPETDDDINVEASSEDEVEDAAPDADDGDVDRLFDATEGRLATVETTRRRANIEHLKA AVAARAADTQLAADGSTAAELAGVTDTTAEYRDDLARVMRPRRVRVDVSRRREVEETRPAPLVLVSEQRIDLDAGASGSD SANIMPRRIARTETETSPTLRPMPILQRAPETSTLVLESPETAEAPEIDVEALQKSRPAPRKMVSSLANLAQRAGQIAMG LNRPAPVAVEEDPTEDEAMEDDTAALSEPTGELTEEPTSDVTPDVADDPAPEADTQPAPAIAENGPNEEDEDPIAALEAQ LAQEIDEEAREEASAAAAEADDDVDHFARFAEVLDNSPATEIEEVVEMGADYLTNEAGLPEFKRMQLLRLVRIATDGSIS RSEAIAAVDQLTDDNVLEALGGNQYRMRRGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96154; Mature: 96022
Theoretical pI: Translated: 3.52; Mature: 3.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDENKILTVSYGTFSCTLEGFDRPFEAMKAIAEYFRDLAAEDRYFGAEPPTPDADTLHR CCCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH ITEAAIERRVEARVLETGMIMRPEGAAAEDTPAFMSASLDAGLHIEDAIESVVPEAEIEV HHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCEEEE EGLDDTPADVAVEEMAQEDADTTDEAEAIEADDTVAEDDNADDVEDAQADGPDAEVPDAA ECCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCE IAVTETAKTGDEGADEADKVADVDAAEIADDEDTPLGATEDASDEDTLAGITAPIAIDDM EEEEECCCCCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHCEECCEEECCC DAEDESEILADDIEEAVGSVDIEAENTASEDVNADDPEAEAARVGDDIVAHDAPAADEGE CCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCC AGADTLIAVAAAMAAGHATADDADGNDAESFAEIPSEETTDDGDWQNVADLDEDADDIAD CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHC SDVDSLFAEEPDGDDAFDGASVAARLARIRRASLVDGDEAVETVQPDDELISAGGEGAAP CHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCCCCCC EPVLETDDETAVAALTAAFATEETTSDAVSEDAEIAPTEDAASDEAPDAEAHGDDEDATL CCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE ALIAAATGSETDFETEVKDEADAEPETDDDINVEASSEDEVEDAAPDADDGDVDRLFDAT EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCCCCCCCCCHHHHHHCC EGRLATVETTRRRANIEHLKAAVAARAADTQLAADGSTAAELAGVTDTTAEYRDDLARVM CCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHCCCCCCHHHHHHHHHHHH RPRRVRVDVSRRREVEETRPAPLVLVSEQRIDLDAGASGSDSANIMPRRIARTETETSPT CCCEEEECHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC LRPMPILQRAPETSTLVLESPETAEAPEIDVEALQKSRPAPRKMVSSLANLAQRAGQIAM CCCCHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCEEE GLNRPAPVAVEEDPTEDEAMEDDTAALSEPTGELTEEPTSDVTPDVADDPAPEADTQPAP CCCCCCCEEECCCCCHHHHHCCHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC AIAENGPNEEDEDPIAALEAQLAQEIDEEAREEASAAAAEADDDVDHFARFAEVLDNSPA CHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH TEIEEVVEMGADYLTNEAGLPEFKRMQLLRLVRIATDGSISRSEAIAAVDQLTDDNVLEA HHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH LGGNQYRMRRGI HCCCCHHHHCCC >Mature Secondary Structure SDENKILTVSYGTFSCTLEGFDRPFEAMKAIAEYFRDLAAEDRYFGAEPPTPDADTLHR CCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH ITEAAIERRVEARVLETGMIMRPEGAAAEDTPAFMSASLDAGLHIEDAIESVVPEAEIEV HHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCEEEE EGLDDTPADVAVEEMAQEDADTTDEAEAIEADDTVAEDDNADDVEDAQADGPDAEVPDAA ECCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCE IAVTETAKTGDEGADEADKVADVDAAEIADDEDTPLGATEDASDEDTLAGITAPIAIDDM EEEEECCCCCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHCEECCEEECCC DAEDESEILADDIEEAVGSVDIEAENTASEDVNADDPEAEAARVGDDIVAHDAPAADEGE CCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCC AGADTLIAVAAAMAAGHATADDADGNDAESFAEIPSEETTDDGDWQNVADLDEDADDIAD CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHC SDVDSLFAEEPDGDDAFDGASVAARLARIRRASLVDGDEAVETVQPDDELISAGGEGAAP CHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCCCCCC EPVLETDDETAVAALTAAFATEETTSDAVSEDAEIAPTEDAASDEAPDAEAHGDDEDATL CCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE ALIAAATGSETDFETEVKDEADAEPETDDDINVEASSEDEVEDAAPDADDGDVDRLFDAT EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCCCCCCCCCHHHHHHCC EGRLATVETTRRRANIEHLKAAVAARAADTQLAADGSTAAELAGVTDTTAEYRDDLARVM CCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHCCCCCCHHHHHHHHHHHH RPRRVRVDVSRRREVEETRPAPLVLVSEQRIDLDAGASGSDSANIMPRRIARTETETSPT CCCEEEECHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC LRPMPILQRAPETSTLVLESPETAEAPEIDVEALQKSRPAPRKMVSSLANLAQRAGQIAM CCCCHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCEEE GLNRPAPVAVEEDPTEDEAMEDDTAALSEPTGELTEEPTSDVTPDVADDPAPEADTQPAP CCCCCCCEEECCCCCHHHHHCCHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC AIAENGPNEEDEDPIAALEAQLAQEIDEEAREEASAAAAEADDDVDHFARFAEVLDNSPA CHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH TEIEEVVEMGADYLTNEAGLPEFKRMQLLRLVRIATDGSISRSEAIAAVDQLTDDNVLEA HHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH LGGNQYRMRRGI HCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA