Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055660

Identifier: 89055660

GI number: 89055660

Start: 3208358

End: 3209053

Strand: Direct

Name: 89055660

Synonym: Jann_3169

Alternate gene names: NA

Gene position: 3208358-3209053 (Clockwise)

Preceding gene: 89055656

Following gene: 89055668

Centisome position: 74.3

GC content: 61.49

Gene sequence:

>696_bases
ATGGCGGATGTTTCTCCCAACGGCGATAGGTTTATCGAGCGCATTGAAAGCCCCCGCACCGGGCATCACCACGACGCTTC
CCAGCGCCAGCGTTTTCCGCTACCGTTGTCCAAAATAATATGGACGTTGAGCAGTCCCATGCAGAAATGGATCACCCTCG
CCGCCGCTGGCGGTCTTGCGGCGTGTCAGTTGCCCCCCCCCGAGGACAGTTTCACCTCGGTCATAGATCCGGTTATCAAC
TCAGGTGCCGCTGGCGTGCAGGTCAGTCGTGGTGTGGGTCCGGCCAATGCGGACCCTCAAAGCTGCTATGGCCGTGAAAT
CGAGCCCGCGGTGATTGAGACGGTGACCGAACAGCTGATGGTCGAGCCGGAAGAGCTGGACCGCAACGGCAACATCCGCC
GCCCCGCTGTTTTCGTCACAGCGACTGAGCAGCGCATTGTCGAGGACCGGACAGAGATCTGGTTTGAAACACCCTGCGAG
ATGGAGAGCGACGCAGAATTCGTTGCCAACCTGCAAAGAGCCCTCACGGCCCGGGGGCATTATGATGGCGCGGTCACCGG
CGAGATGAACCGCGCCACCGTGCGCGCCGTGCGCGCCTACCAACAGCCGCAGGGCCTCGACAGCGGTGTGTTGTCACTGG
CCGCCGCCCGTCAATTGGGTCTGTCGGTCTGGGATCCTGATTTATCAGGCGGATAG

Upstream 100 bases:

>100_bases
GTATCAACCCTATCGCCGCGCGGCACGTCCCGGCTGGCCTTTTCCTGTCGCCAGGCACAGCTACAGCGTGCCGGGCGGCG
CCCATATGGCGGTATAGCCG

Downstream 100 bases:

>100_bases
ATTGCCGCCCAAGACCGCATAATAAAAGCCCCCGGTCGCCATCCAGCGCCGGGGGCTTTGTGTTTCGTGCCACGTCTCAG
GTCACTCCTTGATGCCCAAG

Product: peptidoglycan binding domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MADVSPNGDRFIERIESPRTGHHHDASQRQRFPLPLSKIIWTLSSPMQKWITLAAAGGLAACQLPPPEDSFTSVIDPVIN
SGAAGVQVSRGVGPANADPQSCYGREIEPAVIETVTEQLMVEPEELDRNGNIRRPAVFVTATEQRIVEDRTEIWFETPCE
MESDAEFVANLQRALTARGHYDGAVTGEMNRATVRAVRAYQQPQGLDSGVLSLAAARQLGLSVWDPDLSGG

Sequences:

>Translated_231_residues
MADVSPNGDRFIERIESPRTGHHHDASQRQRFPLPLSKIIWTLSSPMQKWITLAAAGGLAACQLPPPEDSFTSVIDPVIN
SGAAGVQVSRGVGPANADPQSCYGREIEPAVIETVTEQLMVEPEELDRNGNIRRPAVFVTATEQRIVEDRTEIWFETPCE
MESDAEFVANLQRALTARGHYDGAVTGEMNRATVRAVRAYQQPQGLDSGVLSLAAARQLGLSVWDPDLSGG
>Mature_230_residues
ADVSPNGDRFIERIESPRTGHHHDASQRQRFPLPLSKIIWTLSSPMQKWITLAAAGGLAACQLPPPEDSFTSVIDPVINS
GAAGVQVSRGVGPANADPQSCYGREIEPAVIETVTEQLMVEPEELDRNGNIRRPAVFVTATEQRIVEDRTEIWFETPCEM
ESDAEFVANLQRALTARGHYDGAVTGEMNRATVRAVRAYQQPQGLDSGVLSLAAARQLGLSVWDPDLSGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25117; Mature: 24986

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADVSPNGDRFIERIESPRTGHHHDASQRQRFPLPLSKIIWTLSSPMQKWITLAAAGGLA
CCCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEE
ACQLPPPEDSFTSVIDPVINSGAAGVQVSRGVGPANADPQSCYGREIEPAVIETVTEQLM
ECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHH
VEPEELDRNGNIRRPAVFVTATEQRIVEDRTEIWFETPCEMESDAEFVANLQRALTARGH
CCHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHCCC
YDGAVTGEMNRATVRAVRAYQQPQGLDSGVLSLAAARQLGLSVWDPDLSGG
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEECCCCCCC
>Mature Secondary Structure 
ADVSPNGDRFIERIESPRTGHHHDASQRQRFPLPLSKIIWTLSSPMQKWITLAAAGGLA
CCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEE
ACQLPPPEDSFTSVIDPVINSGAAGVQVSRGVGPANADPQSCYGREIEPAVIETVTEQLM
ECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHH
VEPEELDRNGNIRRPAVFVTATEQRIVEDRTEIWFETPCEMESDAEFVANLQRALTARGH
CCHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHCCC
YDGAVTGEMNRATVRAVRAYQQPQGLDSGVLSLAAARQLGLSVWDPDLSGG
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA