Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89055668

Identifier: 89055668

GI number: 89055668

Start: 3216696

End: 3219434

Strand: Direct

Name: 89055668

Synonym: Jann_3177

Alternate gene names: NA

Gene position: 3216696-3219434 (Clockwise)

Preceding gene: 89055660

Following gene: 89055671

Centisome position: 74.5

GC content: 64.29

Gene sequence:

>2739_bases
ATGAGCGACGAAAACAAGATCCTGACGGTCTCCTACGGCACATTTTCCTGTACCCTAGAGGGATTTGATCGCCCGTTCGA
GGCGATGAAAGCGATCGCGGAGTATTTTCGCGATCTGGCTGCTGAAGACCGCTATTTCGGGGCCGAACCCCCGACCCCGG
ATGCTGACACCCTGCACCGCATCACCGAGGCCGCGATTGAGCGCCGCGTGGAAGCCCGCGTGCTTGAGACGGGTATGATC
ATGCGTCCCGAAGGTGCCGCCGCCGAAGATACCCCCGCCTTCATGAGCGCAAGCCTTGATGCGGGTCTGCACATTGAAGA
TGCCATCGAAAGCGTCGTGCCCGAAGCCGAAATCGAGGTGGAGGGTCTGGACGACACCCCTGCTGATGTCGCCGTGGAAG
AGATGGCTCAGGAGGACGCGGACACCACGGATGAAGCCGAGGCTATCGAAGCGGATGACACCGTCGCCGAAGACGACAAT
GCCGATGATGTTGAAGACGCCCAAGCTGACGGCCCTGACGCTGAGGTCCCGGACGCTGCCATAGCGGTCACTGAGACGGC
CAAAACCGGCGATGAAGGCGCTGACGAGGCGGACAAGGTGGCAGATGTCGACGCGGCCGAGATCGCGGACGACGAAGACA
CGCCCCTGGGCGCCACAGAGGACGCGTCGGACGAGGATACCCTGGCCGGGATCACCGCGCCCATCGCTATCGACGATATG
GACGCCGAAGATGAGTCCGAGATCCTGGCCGACGACATTGAAGAGGCAGTCGGTTCGGTAGACATCGAAGCAGAAAACAC
CGCATCAGAAGACGTCAACGCTGACGACCCTGAGGCCGAAGCTGCCCGTGTCGGCGACGACATTGTGGCCCATGACGCGC
CTGCCGCCGATGAAGGTGAGGCCGGTGCCGATACGCTGATCGCGGTCGCCGCTGCCATGGCGGCGGGTCATGCAACCGCC
GACGATGCGGACGGTAATGACGCTGAAAGTTTCGCTGAAATTCCTTCGGAGGAGACAACCGATGACGGCGATTGGCAGAA
TGTTGCCGATCTGGACGAGGATGCTGACGACATTGCCGATAGCGACGTCGATAGCCTTTTTGCCGAAGAGCCCGACGGTG
ACGATGCCTTCGACGGAGCGTCTGTTGCCGCCCGTCTGGCCCGCATTCGCCGCGCCTCGCTGGTCGATGGCGACGAGGCT
GTCGAAACGGTGCAACCTGATGATGAGTTGATTTCGGCCGGCGGCGAAGGGGCCGCGCCCGAGCCCGTACTCGAAACTGA
CGATGAGACCGCCGTGGCGGCCCTCACCGCCGCCTTCGCCACGGAGGAAACGACTTCGGATGCTGTGTCCGAAGACGCCG
AGATCGCCCCGACCGAGGATGCTGCATCGGACGAGGCACCGGATGCGGAAGCGCACGGCGACGACGAGGACGCCACCCTG
GCCCTCATCGCGGCGGCGACCGGATCCGAGACGGACTTCGAAACCGAGGTCAAGGATGAGGCGGACGCCGAGCCTGAGAC
GGACGATGACATTAACGTGGAGGCCTCGTCGGAGGACGAGGTTGAAGATGCCGCGCCCGACGCGGACGATGGAGATGTCG
ACCGCCTGTTCGACGCCACCGAGGGGCGGCTTGCAACCGTGGAAACCACCCGCCGCCGCGCCAATATCGAGCATCTCAAG
GCAGCCGTCGCCGCCCGCGCGGCCGACACGCAGCTTGCCGCCGATGGCTCTACCGCCGCCGAGTTGGCGGGCGTCACGGA
TACCACCGCCGAATACCGCGATGATCTGGCCCGTGTGATGCGCCCCCGTCGGGTTCGTGTCGACGTCTCGCGCCGCCGTG
AGGTCGAAGAGACGCGCCCCGCGCCGCTGGTGCTTGTGTCCGAGCAGCGCATTGACCTTGATGCCGGGGCGAGCGGGTCG
GACAGCGCGAACATCATGCCGCGCCGGATCGCACGGACGGAAACCGAAACCAGCCCGACGCTGCGCCCGATGCCGATCCT
GCAACGCGCGCCGGAAACGTCTACGCTTGTGTTGGAATCGCCGGAAACCGCTGAAGCGCCTGAGATTGACGTCGAAGCGC
TGCAGAAATCCCGCCCTGCCCCGCGCAAGATGGTGAGCTCTCTGGCAAACCTTGCCCAAAGGGCCGGTCAGATCGCGATG
GGCCTGAACCGCCCCGCGCCGGTGGCCGTCGAAGAAGACCCGACCGAGGACGAGGCGATGGAAGACGACACCGCCGCACT
GTCCGAGCCAACCGGAGAATTGACCGAGGAGCCGACATCGGACGTGACGCCAGACGTGGCTGACGATCCGGCACCCGAGG
CCGATACGCAGCCTGCACCGGCCATCGCGGAGAACGGGCCGAACGAAGAGGACGAAGATCCAATTGCCGCGCTGGAGGCG
CAGCTGGCCCAGGAAATCGACGAAGAAGCCCGGGAAGAGGCGTCGGCTGCCGCAGCGGAGGCCGATGACGACGTCGATCA
CTTTGCCCGATTTGCAGAGGTCCTGGACAATTCACCGGCGACCGAGATCGAGGAAGTCGTTGAAATGGGTGCAGATTACC
TGACCAACGAGGCGGGCCTGCCGGAGTTCAAGCGCATGCAATTGCTGCGTCTGGTGCGGATCGCAACCGACGGATCGATC
TCGCGCTCGGAAGCCATCGCGGCCGTGGACCAGTTGACCGATGACAATGTGCTGGAAGCCCTTGGGGGCAACCAGTACCG
GATGCGTCGCGGGATCTGA

Upstream 100 bases:

>100_bases
GGAAACAGTTTGTTACACATTTCGTGACGATGATAATTCCGGTTAGGCCCGGACAAAGTAGACTTCCGGGATCAATCCGG
ACGAGCAGAGTGGCAGAGCA

Downstream 100 bases:

>100_bases
TCCCGCACAAATCACAAGCAAAAGGGCGCCGCAACGGGCGCCCTTTTCGTATGGTCAGCGTCCGGGCATTCAGGGACCGC
TAATCCTCAGGCGCGTCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: CheA Signal Transduction Histidine Kinase; CheA Signal Transduction Histidine Kinases

Number of amino acids: Translated: 912; Mature: 911

Protein sequence:

>912_residues
MSDENKILTVSYGTFSCTLEGFDRPFEAMKAIAEYFRDLAAEDRYFGAEPPTPDADTLHRITEAAIERRVEARVLETGMI
MRPEGAAAEDTPAFMSASLDAGLHIEDAIESVVPEAEIEVEGLDDTPADVAVEEMAQEDADTTDEAEAIEADDTVAEDDN
ADDVEDAQADGPDAEVPDAAIAVTETAKTGDEGADEADKVADVDAAEIADDEDTPLGATEDASDEDTLAGITAPIAIDDM
DAEDESEILADDIEEAVGSVDIEAENTASEDVNADDPEAEAARVGDDIVAHDAPAADEGEAGADTLIAVAAAMAAGHATA
DDADGNDAESFAEIPSEETTDDGDWQNVADLDEDADDIADSDVDSLFAEEPDGDDAFDGASVAARLARIRRASLVDGDEA
VETVQPDDELISAGGEGAAPEPVLETDDETAVAALTAAFATEETTSDAVSEDAEIAPTEDAASDEAPDAEAHGDDEDATL
ALIAAATGSETDFETEVKDEADAEPETDDDINVEASSEDEVEDAAPDADDGDVDRLFDATEGRLATVETTRRRANIEHLK
AAVAARAADTQLAADGSTAAELAGVTDTTAEYRDDLARVMRPRRVRVDVSRRREVEETRPAPLVLVSEQRIDLDAGASGS
DSANIMPRRIARTETETSPTLRPMPILQRAPETSTLVLESPETAEAPEIDVEALQKSRPAPRKMVSSLANLAQRAGQIAM
GLNRPAPVAVEEDPTEDEAMEDDTAALSEPTGELTEEPTSDVTPDVADDPAPEADTQPAPAIAENGPNEEDEDPIAALEA
QLAQEIDEEAREEASAAAAEADDDVDHFARFAEVLDNSPATEIEEVVEMGADYLTNEAGLPEFKRMQLLRLVRIATDGSI
SRSEAIAAVDQLTDDNVLEALGGNQYRMRRGI

Sequences:

>Translated_912_residues
MSDENKILTVSYGTFSCTLEGFDRPFEAMKAIAEYFRDLAAEDRYFGAEPPTPDADTLHRITEAAIERRVEARVLETGMI
MRPEGAAAEDTPAFMSASLDAGLHIEDAIESVVPEAEIEVEGLDDTPADVAVEEMAQEDADTTDEAEAIEADDTVAEDDN
ADDVEDAQADGPDAEVPDAAIAVTETAKTGDEGADEADKVADVDAAEIADDEDTPLGATEDASDEDTLAGITAPIAIDDM
DAEDESEILADDIEEAVGSVDIEAENTASEDVNADDPEAEAARVGDDIVAHDAPAADEGEAGADTLIAVAAAMAAGHATA
DDADGNDAESFAEIPSEETTDDGDWQNVADLDEDADDIADSDVDSLFAEEPDGDDAFDGASVAARLARIRRASLVDGDEA
VETVQPDDELISAGGEGAAPEPVLETDDETAVAALTAAFATEETTSDAVSEDAEIAPTEDAASDEAPDAEAHGDDEDATL
ALIAAATGSETDFETEVKDEADAEPETDDDINVEASSEDEVEDAAPDADDGDVDRLFDATEGRLATVETTRRRANIEHLK
AAVAARAADTQLAADGSTAAELAGVTDTTAEYRDDLARVMRPRRVRVDVSRRREVEETRPAPLVLVSEQRIDLDAGASGS
DSANIMPRRIARTETETSPTLRPMPILQRAPETSTLVLESPETAEAPEIDVEALQKSRPAPRKMVSSLANLAQRAGQIAM
GLNRPAPVAVEEDPTEDEAMEDDTAALSEPTGELTEEPTSDVTPDVADDPAPEADTQPAPAIAENGPNEEDEDPIAALEA
QLAQEIDEEAREEASAAAAEADDDVDHFARFAEVLDNSPATEIEEVVEMGADYLTNEAGLPEFKRMQLLRLVRIATDGSI
SRSEAIAAVDQLTDDNVLEALGGNQYRMRRGI
>Mature_911_residues
SDENKILTVSYGTFSCTLEGFDRPFEAMKAIAEYFRDLAAEDRYFGAEPPTPDADTLHRITEAAIERRVEARVLETGMIM
RPEGAAAEDTPAFMSASLDAGLHIEDAIESVVPEAEIEVEGLDDTPADVAVEEMAQEDADTTDEAEAIEADDTVAEDDNA
DDVEDAQADGPDAEVPDAAIAVTETAKTGDEGADEADKVADVDAAEIADDEDTPLGATEDASDEDTLAGITAPIAIDDMD
AEDESEILADDIEEAVGSVDIEAENTASEDVNADDPEAEAARVGDDIVAHDAPAADEGEAGADTLIAVAAAMAAGHATAD
DADGNDAESFAEIPSEETTDDGDWQNVADLDEDADDIADSDVDSLFAEEPDGDDAFDGASVAARLARIRRASLVDGDEAV
ETVQPDDELISAGGEGAAPEPVLETDDETAVAALTAAFATEETTSDAVSEDAEIAPTEDAASDEAPDAEAHGDDEDATLA
LIAAATGSETDFETEVKDEADAEPETDDDINVEASSEDEVEDAAPDADDGDVDRLFDATEGRLATVETTRRRANIEHLKA
AVAARAADTQLAADGSTAAELAGVTDTTAEYRDDLARVMRPRRVRVDVSRRREVEETRPAPLVLVSEQRIDLDAGASGSD
SANIMPRRIARTETETSPTLRPMPILQRAPETSTLVLESPETAEAPEIDVEALQKSRPAPRKMVSSLANLAQRAGQIAMG
LNRPAPVAVEEDPTEDEAMEDDTAALSEPTGELTEEPTSDVTPDVADDPAPEADTQPAPAIAENGPNEEDEDPIAALEAQ
LAQEIDEEAREEASAAAAEADDDVDHFARFAEVLDNSPATEIEEVVEMGADYLTNEAGLPEFKRMQLLRLVRIATDGSIS
RSEAIAAVDQLTDDNVLEALGGNQYRMRRGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96154; Mature: 96022

Theoretical pI: Translated: 3.52; Mature: 3.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDENKILTVSYGTFSCTLEGFDRPFEAMKAIAEYFRDLAAEDRYFGAEPPTPDADTLHR
CCCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ITEAAIERRVEARVLETGMIMRPEGAAAEDTPAFMSASLDAGLHIEDAIESVVPEAEIEV
HHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCEEEE
EGLDDTPADVAVEEMAQEDADTTDEAEAIEADDTVAEDDNADDVEDAQADGPDAEVPDAA
ECCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCE
IAVTETAKTGDEGADEADKVADVDAAEIADDEDTPLGATEDASDEDTLAGITAPIAIDDM
EEEEECCCCCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHCEECCEEECCC
DAEDESEILADDIEEAVGSVDIEAENTASEDVNADDPEAEAARVGDDIVAHDAPAADEGE
CCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCC
AGADTLIAVAAAMAAGHATADDADGNDAESFAEIPSEETTDDGDWQNVADLDEDADDIAD
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHC
SDVDSLFAEEPDGDDAFDGASVAARLARIRRASLVDGDEAVETVQPDDELISAGGEGAAP
CHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCCCCCC
EPVLETDDETAVAALTAAFATEETTSDAVSEDAEIAPTEDAASDEAPDAEAHGDDEDATL
CCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
ALIAAATGSETDFETEVKDEADAEPETDDDINVEASSEDEVEDAAPDADDGDVDRLFDAT
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCCCCCCCCCHHHHHHCC
EGRLATVETTRRRANIEHLKAAVAARAADTQLAADGSTAAELAGVTDTTAEYRDDLARVM
CCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHCCCCCCHHHHHHHHHHHH
RPRRVRVDVSRRREVEETRPAPLVLVSEQRIDLDAGASGSDSANIMPRRIARTETETSPT
CCCEEEECHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
LRPMPILQRAPETSTLVLESPETAEAPEIDVEALQKSRPAPRKMVSSLANLAQRAGQIAM
CCCCHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCEEE
GLNRPAPVAVEEDPTEDEAMEDDTAALSEPTGELTEEPTSDVTPDVADDPAPEADTQPAP
CCCCCCCEEECCCCCHHHHHCCHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC
AIAENGPNEEDEDPIAALEAQLAQEIDEEAREEASAAAAEADDDVDHFARFAEVLDNSPA
CHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH
TEIEEVVEMGADYLTNEAGLPEFKRMQLLRLVRIATDGSISRSEAIAAVDQLTDDNVLEA
HHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH
LGGNQYRMRRGI
HCCCCHHHHCCC
>Mature Secondary Structure 
SDENKILTVSYGTFSCTLEGFDRPFEAMKAIAEYFRDLAAEDRYFGAEPPTPDADTLHR
CCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ITEAAIERRVEARVLETGMIMRPEGAAAEDTPAFMSASLDAGLHIEDAIESVVPEAEIEV
HHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCEEEE
EGLDDTPADVAVEEMAQEDADTTDEAEAIEADDTVAEDDNADDVEDAQADGPDAEVPDAA
ECCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCE
IAVTETAKTGDEGADEADKVADVDAAEIADDEDTPLGATEDASDEDTLAGITAPIAIDDM
EEEEECCCCCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHCEECCEEECCC
DAEDESEILADDIEEAVGSVDIEAENTASEDVNADDPEAEAARVGDDIVAHDAPAADEGE
CCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCC
AGADTLIAVAAAMAAGHATADDADGNDAESFAEIPSEETTDDGDWQNVADLDEDADDIAD
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHC
SDVDSLFAEEPDGDDAFDGASVAARLARIRRASLVDGDEAVETVQPDDELISAGGEGAAP
CHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCCCCCC
EPVLETDDETAVAALTAAFATEETTSDAVSEDAEIAPTEDAASDEAPDAEAHGDDEDATL
CCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
ALIAAATGSETDFETEVKDEADAEPETDDDINVEASSEDEVEDAAPDADDGDVDRLFDAT
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCCCCCCCCCHHHHHHCC
EGRLATVETTRRRANIEHLKAAVAARAADTQLAADGSTAAELAGVTDTTAEYRDDLARVM
CCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHCCCCCCHHHHHHHHHHHH
RPRRVRVDVSRRREVEETRPAPLVLVSEQRIDLDAGASGSDSANIMPRRIARTETETSPT
CCCEEEECHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
LRPMPILQRAPETSTLVLESPETAEAPEIDVEALQKSRPAPRKMVSSLANLAQRAGQIAM
CCCCHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCEEE
GLNRPAPVAVEEDPTEDEAMEDDTAALSEPTGELTEEPTSDVTPDVADDPAPEADTQPAP
CCCCCCCEEECCCCCHHHHHCCHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC
AIAENGPNEEDEDPIAALEAQLAQEIDEEAREEASAAAAEADDDVDHFARFAEVLDNSPA
CHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH
TEIEEVVEMGADYLTNEAGLPEFKRMQLLRLVRIATDGSISRSEAIAAVDQLTDDNVLEA
HHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH
LGGNQYRMRRGI
HCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA