| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055653
Identifier: 89055653
GI number: 89055653
Start: 3202878
End: 3203591
Strand: Direct
Name: 89055653
Synonym: Jann_3162
Alternate gene names: NA
Gene position: 3202878-3203591 (Clockwise)
Preceding gene: 89055652
Following gene: 89055656
Centisome position: 74.18
GC content: 62.04
Gene sequence:
>714_bases ATGATCATAAACGCATTTCTCAAGGCCTTAGGGCAATTGACCGACGGCCGGTTTCTGGGCGTATTGGCGATGGGCATCGG CCTGACCATCGGCCTACTGGTGGCCTTTTACGGGGTCTTCGCCCTAGTCATCGGGTGGATGCTGCCCGACAGTTTCAGCC TGCCGTGGATCGGCGAGGTCACCTGGGTCGACAATGCGTTAACGCTGGCGGGCATCCCCTTGATGTTGCTTTTGTCGATC TTCCTGATGGTGCCCGTGGCCTCCGCCTTCATGGGCATCTTTCTCGACCGGGTGGCCAATGCCGTGGAGGACAAGCACTA CAGTGGCCTGCCGCCCGCACGCGGGCTCTCCATTGCGGAAGCCCTTGCGGATGTCGCGAAATTTCTGGGTGTGCTCACCC TGGTGAACCTTGTGGCGCTGATCCTGTATCTGATCTTCGCCCCCCTCGCGCCCCTGTTGTTCTGGGTCGTGAACGGCATA CTTCTGGGCCGGGAATACGGCCAGATGGTCGCCCTGCGCCGGGAAAGCGCGGCAGGGGCTGCGGATTTCCGCAAACGCAA CCGCCCCACGTTGTTCGCGGCGGGCGTGTTGATGACCGTGCCCCTGACCATCCCGGTGGTAAACCTGCTGGTCCCCATCC TCGGGGCCGCGACGTTCACGCACCTTTACCATATGCTCAACGCGGCGCCGAGGAGCCCATCCCAAAGCGTGTGA
Upstream 100 bases:
>100_bases ATGAATCCGTGGCCGGCTTCATCCACATAGCCAATGAGGTGCGCGTCCCGCCGGACCGCCCTCGCCCCGATACAGACGCG CTGACCACTTGGGTAAACAC
Downstream 100 bases:
>100_bases ACAGGTCGATGTCATCGATCGTCACCAGCTCGAATATGATGATGGAGGCGACGACCGCCCAGATGCCTGCAGCGCAGATG CTGGTCCAGATGATGCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Carbamoyl-Phosphate Synthase Large Chain; CysZ Protein
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MIINAFLKALGQLTDGRFLGVLAMGIGLTIGLLVAFYGVFALVIGWMLPDSFSLPWIGEVTWVDNALTLAGIPLMLLLSI FLMVPVASAFMGIFLDRVANAVEDKHYSGLPPARGLSIAEALADVAKFLGVLTLVNLVALILYLIFAPLAPLLFWVVNGI LLGREYGQMVALRRESAAGAADFRKRNRPTLFAAGVLMTVPLTIPVVNLLVPILGAATFTHLYHMLNAAPRSPSQSV
Sequences:
>Translated_237_residues MIINAFLKALGQLTDGRFLGVLAMGIGLTIGLLVAFYGVFALVIGWMLPDSFSLPWIGEVTWVDNALTLAGIPLMLLLSI FLMVPVASAFMGIFLDRVANAVEDKHYSGLPPARGLSIAEALADVAKFLGVLTLVNLVALILYLIFAPLAPLLFWVVNGI LLGREYGQMVALRRESAAGAADFRKRNRPTLFAAGVLMTVPLTIPVVNLLVPILGAATFTHLYHMLNAAPRSPSQSV >Mature_237_residues MIINAFLKALGQLTDGRFLGVLAMGIGLTIGLLVAFYGVFALVIGWMLPDSFSLPWIGEVTWVDNALTLAGIPLMLLLSI FLMVPVASAFMGIFLDRVANAVEDKHYSGLPPARGLSIAEALADVAKFLGVLTLVNLVALILYLIFAPLAPLLFWVVNGI LLGREYGQMVALRRESAAGAADFRKRNRPTLFAAGVLMTVPLTIPVVNLLVPILGAATFTHLYHMLNAAPRSPSQSV
Specific function: Unknown
COG id: COG2981
COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25413; Mature: 25413
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIINAFLKALGQLTDGRFLGVLAMGIGLTIGLLVAFYGVFALVIGWMLPDSFSLPWIGEV CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH TWVDNALTLAGIPLMLLLSIFLMVPVASAFMGIFLDRVANAVEDKHYSGLPPARGLSIAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH ALADVAKFLGVLTLVNLVALILYLIFAPLAPLLFWVVNGILLGREYGQMVALRRESAAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ADFRKRNRPTLFAAGVLMTVPLTIPVVNLLVPILGAATFTHLYHMLNAAPRSPSQSV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MIINAFLKALGQLTDGRFLGVLAMGIGLTIGLLVAFYGVFALVIGWMLPDSFSLPWIGEV CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH TWVDNALTLAGIPLMLLLSIFLMVPVASAFMGIFLDRVANAVEDKHYSGLPPARGLSIAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH ALADVAKFLGVLTLVNLVALILYLIFAPLAPLLFWVVNGILLGREYGQMVALRRESAAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ADFRKRNRPTLFAAGVLMTVPLTIPVVNLLVPILGAATFTHLYHMLNAAPRSPSQSV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA