Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055653

Identifier: 89055653

GI number: 89055653

Start: 3202878

End: 3203591

Strand: Direct

Name: 89055653

Synonym: Jann_3162

Alternate gene names: NA

Gene position: 3202878-3203591 (Clockwise)

Preceding gene: 89055652

Following gene: 89055656

Centisome position: 74.18

GC content: 62.04

Gene sequence:

>714_bases
ATGATCATAAACGCATTTCTCAAGGCCTTAGGGCAATTGACCGACGGCCGGTTTCTGGGCGTATTGGCGATGGGCATCGG
CCTGACCATCGGCCTACTGGTGGCCTTTTACGGGGTCTTCGCCCTAGTCATCGGGTGGATGCTGCCCGACAGTTTCAGCC
TGCCGTGGATCGGCGAGGTCACCTGGGTCGACAATGCGTTAACGCTGGCGGGCATCCCCTTGATGTTGCTTTTGTCGATC
TTCCTGATGGTGCCCGTGGCCTCCGCCTTCATGGGCATCTTTCTCGACCGGGTGGCCAATGCCGTGGAGGACAAGCACTA
CAGTGGCCTGCCGCCCGCACGCGGGCTCTCCATTGCGGAAGCCCTTGCGGATGTCGCGAAATTTCTGGGTGTGCTCACCC
TGGTGAACCTTGTGGCGCTGATCCTGTATCTGATCTTCGCCCCCCTCGCGCCCCTGTTGTTCTGGGTCGTGAACGGCATA
CTTCTGGGCCGGGAATACGGCCAGATGGTCGCCCTGCGCCGGGAAAGCGCGGCAGGGGCTGCGGATTTCCGCAAACGCAA
CCGCCCCACGTTGTTCGCGGCGGGCGTGTTGATGACCGTGCCCCTGACCATCCCGGTGGTAAACCTGCTGGTCCCCATCC
TCGGGGCCGCGACGTTCACGCACCTTTACCATATGCTCAACGCGGCGCCGAGGAGCCCATCCCAAAGCGTGTGA

Upstream 100 bases:

>100_bases
ATGAATCCGTGGCCGGCTTCATCCACATAGCCAATGAGGTGCGCGTCCCGCCGGACCGCCCTCGCCCCGATACAGACGCG
CTGACCACTTGGGTAAACAC

Downstream 100 bases:

>100_bases
ACAGGTCGATGTCATCGATCGTCACCAGCTCGAATATGATGATGGAGGCGACGACCGCCCAGATGCCTGCAGCGCAGATG
CTGGTCCAGATGATGCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Carbamoyl-Phosphate Synthase Large Chain; CysZ Protein

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MIINAFLKALGQLTDGRFLGVLAMGIGLTIGLLVAFYGVFALVIGWMLPDSFSLPWIGEVTWVDNALTLAGIPLMLLLSI
FLMVPVASAFMGIFLDRVANAVEDKHYSGLPPARGLSIAEALADVAKFLGVLTLVNLVALILYLIFAPLAPLLFWVVNGI
LLGREYGQMVALRRESAAGAADFRKRNRPTLFAAGVLMTVPLTIPVVNLLVPILGAATFTHLYHMLNAAPRSPSQSV

Sequences:

>Translated_237_residues
MIINAFLKALGQLTDGRFLGVLAMGIGLTIGLLVAFYGVFALVIGWMLPDSFSLPWIGEVTWVDNALTLAGIPLMLLLSI
FLMVPVASAFMGIFLDRVANAVEDKHYSGLPPARGLSIAEALADVAKFLGVLTLVNLVALILYLIFAPLAPLLFWVVNGI
LLGREYGQMVALRRESAAGAADFRKRNRPTLFAAGVLMTVPLTIPVVNLLVPILGAATFTHLYHMLNAAPRSPSQSV
>Mature_237_residues
MIINAFLKALGQLTDGRFLGVLAMGIGLTIGLLVAFYGVFALVIGWMLPDSFSLPWIGEVTWVDNALTLAGIPLMLLLSI
FLMVPVASAFMGIFLDRVANAVEDKHYSGLPPARGLSIAEALADVAKFLGVLTLVNLVALILYLIFAPLAPLLFWVVNGI
LLGREYGQMVALRRESAAGAADFRKRNRPTLFAAGVLMTVPLTIPVVNLLVPILGAATFTHLYHMLNAAPRSPSQSV

Specific function: Unknown

COG id: COG2981

COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25413; Mature: 25413

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIINAFLKALGQLTDGRFLGVLAMGIGLTIGLLVAFYGVFALVIGWMLPDSFSLPWIGEV
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
TWVDNALTLAGIPLMLLLSIFLMVPVASAFMGIFLDRVANAVEDKHYSGLPPARGLSIAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
ALADVAKFLGVLTLVNLVALILYLIFAPLAPLLFWVVNGILLGREYGQMVALRRESAAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ADFRKRNRPTLFAAGVLMTVPLTIPVVNLLVPILGAATFTHLYHMLNAAPRSPSQSV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIINAFLKALGQLTDGRFLGVLAMGIGLTIGLLVAFYGVFALVIGWMLPDSFSLPWIGEV
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
TWVDNALTLAGIPLMLLLSIFLMVPVASAFMGIFLDRVANAVEDKHYSGLPPARGLSIAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
ALADVAKFLGVLTLVNLVALILYLIFAPLAPLLFWVVNGILLGREYGQMVALRRESAAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ADFRKRNRPTLFAAGVLMTVPLTIPVVNLLVPILGAATFTHLYHMLNAAPRSPSQSV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA