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The map label for this gene is ydjA [H]

Identifier: 89055652

GI number: 89055652

Start: 3202294

End: 3202881

Strand: Direct

Name: ydjA [H]

Synonym: Jann_3161

Alternate gene names: 89055652

Gene position: 3202294-3202881 (Clockwise)

Preceding gene: 89055651

Following gene: 89055653

Centisome position: 74.16

GC content: 65.48

Gene sequence:

>588_bases
GTGCCCCCGCCCCTCTCGCCGAACCCAGCAGCTCTGGAATTCCTGTTGCACCGCCGCTCGCGGCCCCCTCGCATGTTGGG
CAACAGCGCGCCGGACCGGGAGGCTCTTCGGACACTCCTGGCCGCTGCGACGCGCGTTCCCGACCACGGAAAGCTGGAGC
CTTGGCGGTTCATTGTCTTGACGGCGGAGGCCTGTAAACGGCTGGCCGTGCTGACAAAATCCCGTGGAGCCGCGTTGGGG
GTCGACGAGCGCCGTCTTGAGAAGGATCACAGCGGCTTTGTGGATGCGCCGCTGATCGTGGCGGTTATCTCCAGCCCTAA
ACCCCACCCCACCGTGCCGGAGAGTGAGCAATATGCCTCCGCCGCCGCAGTCTGCGTGTCGCTTCTGAACGCGGCGCTCG
CAGCCGGATGGGGCGCGGTTTGGTTAACGGGATGGCGGGCGACCGACAGGCCGTTTCTGACGCAAGGACTGAACCTTTTC
CCCCATGAATCCGTGGCCGGCTTCATCCACATAGCCAATGAGGTGCGCGTCCCGCCGGACCGCCCTCGCCCCGATACAGA
CGCGCTGACCACTTGGGTAAACACATGA

Upstream 100 bases:

>100_bases
CCTGCGGCAAAGAAAACGGCCAAATCCGCAGATTAGCGTGGAAAGTGGCGGGGCGAGGCTTGATCTCGTGCCCGCCGCGC
CCGAAATCGAAGGGATGTCA

Downstream 100 bases:

>100_bases
TCATAAACGCATTTCTCAAGGCCTTAGGGCAATTGACCGACGGCCGGTTTCTGGGCGTATTGGCGATGGGCATCGGCCTG
ACCATCGGCCTACTGGTGGC

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MPPPLSPNPAALEFLLHRRSRPPRMLGNSAPDREALRTLLAAATRVPDHGKLEPWRFIVLTAEACKRLAVLTKSRGAALG
VDERRLEKDHSGFVDAPLIVAVISSPKPHPTVPESEQYASAAAVCVSLLNAALAAGWGAVWLTGWRATDRPFLTQGLNLF
PHESVAGFIHIANEVRVPPDRPRPDTDALTTWVNT

Sequences:

>Translated_195_residues
MPPPLSPNPAALEFLLHRRSRPPRMLGNSAPDREALRTLLAAATRVPDHGKLEPWRFIVLTAEACKRLAVLTKSRGAALG
VDERRLEKDHSGFVDAPLIVAVISSPKPHPTVPESEQYASAAAVCVSLLNAALAAGWGAVWLTGWRATDRPFLTQGLNLF
PHESVAGFIHIANEVRVPPDRPRPDTDALTTWVNT
>Mature_194_residues
PPPLSPNPAALEFLLHRRSRPPRMLGNSAPDREALRTLLAAATRVPDHGKLEPWRFIVLTAEACKRLAVLTKSRGAALGV
DERRLEKDHSGFVDAPLIVAVISSPKPHPTVPESEQYASAAAVCVSLLNAALAAGWGAVWLTGWRATDRPFLTQGLNLFP
HESVAGFIHIANEVRVPPDRPRPDTDALTTWVNT

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=163, Percent_Identity=30.6748466257669, Blast_Score=95, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 21207; Mature: 21075

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPPLSPNPAALEFLLHRRSRPPRMLGNSAPDREALRTLLAAATRVPDHGKLEPWRFIVL
CCCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEE
TAEACKRLAVLTKSRGAALGVDERRLEKDHSGFVDAPLIVAVISSPKPHPTVPESEQYAS
EHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHEEEECCCCCCCCCCCCHHHHH
AAAVCVSLLNAALAAGWGAVWLTGWRATDRPFLTQGLNLFPHESVAGFIHIANEVRVPPD
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHCCCCCCCHHHHHHEECCCCCCCCCC
RPRPDTDALTTWVNT
CCCCCHHHHHHCCCC
>Mature Secondary Structure 
PPPLSPNPAALEFLLHRRSRPPRMLGNSAPDREALRTLLAAATRVPDHGKLEPWRFIVL
CCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEE
TAEACKRLAVLTKSRGAALGVDERRLEKDHSGFVDAPLIVAVISSPKPHPTVPESEQYAS
EHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHEEEECCCCCCCCCCCCHHHHH
AAAVCVSLLNAALAAGWGAVWLTGWRATDRPFLTQGLNLFPHESVAGFIHIANEVRVPPD
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHCCCCCCCHHHHHHEECCCCCCCCCC
RPRPDTDALTTWVNT
CCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]