| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055628
Identifier: 89055628
GI number: 89055628
Start: 3176139
End: 3176807
Strand: Direct
Name: 89055628
Synonym: Jann_3137
Alternate gene names: NA
Gene position: 3176139-3176807 (Clockwise)
Preceding gene: 89055627
Following gene: 89055631
Centisome position: 73.56
GC content: 66.82
Gene sequence:
>669_bases TTGAGCGATAAATCCGCGATCCGCGACGCGGCCACGGGCATCTTGTTGCGGGATGCGGCCACGCGCCCCCGGGTTCTGAT GGGCCAGCGCGGCAAGGACGCGGCATTCATGCCGTCGAAGTTCGTCTTTCCCGGCGGCGCGGTGGATGCGGTGGATGCCG AGATCCCATTTGCCCGCCCCCCGGCTGCCGATTGCCTCAGGCGTTTGTCGCTGGACGGGGCCAATGGGCCTGCGTTGATG GCCGCGGCGGTGCGCGAGATCTGGGAAGAGACCGGTCTGCTTCTGGGCGCAAAAGACACGCGCGCAGGTGAGATCACTGC GCCCAAGGGCTGGCGCGGCTATCTGGCCACCGGACATCTGCCCGACGGCGCGGCTCTGGAATACGTCTTCCGTGCGATCA CGCCCGCCGGTCGGCCCCGCCGGTTTGACGCGCGGTTCTTTTTGGTGGACGCCGATGCACTGGCCTCCGACCCCGACGAT TTCTCGGGCGCGGAGGATGAGTTGAGCCATTTGCAGTGGATCCCGCTGGACGAGGTGCGCGGGTTCGACATGCCGTTTAT CACCGAGGTTGTGCTATCCGAGCTGGCCGCAAAGGTGGAAGGCCGCGCCGTTCCGGGCGTGCCGTTCTTCGACAATGCGA CGGCGGAGAGCCGGTTCAGGCGGCTCTAG
Upstream 100 bases:
>100_bases TGACGTTCAGCATTGGTGTTACCGTGATGGCGCTGGCCCTTCTGCCCCGGTTCAAGGGCCTGATTGTCGGCATCCAATGG GCCAAGCGGATGCACGGATT
Downstream 100 bases:
>100_bases GGGACAGGGGTTGCGCCCGCGGGCGCGGCCGCCCGCGCTGGGGGTTTTACCCCCAGACCCCCAGAGTTGTATGGCCCAGA TGAAAAGAGCGGAGCCGTCG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: Hydrolase Nudix Family; Nudix Hydrolase; Hydrolase NUDIX Family; NUDIX Family Hydrolase; Hydrolase; LOW QUALITY PROTEIN NUDIX Hydrolase; Phosphohydrolase; MutT/Nudix Family Phosphohydrolase; NUDIX Superfamily Hydrolase; Beta-Lactamase Domain-Containing Protein; NUDIX Family Protein
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSDKSAIRDAATGILLRDAATRPRVLMGQRGKDAAFMPSKFVFPGGAVDAVDAEIPFARPPAADCLRRLSLDGANGPALM AAAVREIWEETGLLLGAKDTRAGEITAPKGWRGYLATGHLPDGAALEYVFRAITPAGRPRRFDARFFLVDADALASDPDD FSGAEDELSHLQWIPLDEVRGFDMPFITEVVLSELAAKVEGRAVPGVPFFDNATAESRFRRL
Sequences:
>Translated_222_residues MSDKSAIRDAATGILLRDAATRPRVLMGQRGKDAAFMPSKFVFPGGAVDAVDAEIPFARPPAADCLRRLSLDGANGPALM AAAVREIWEETGLLLGAKDTRAGEITAPKGWRGYLATGHLPDGAALEYVFRAITPAGRPRRFDARFFLVDADALASDPDD FSGAEDELSHLQWIPLDEVRGFDMPFITEVVLSELAAKVEGRAVPGVPFFDNATAESRFRRL >Mature_221_residues SDKSAIRDAATGILLRDAATRPRVLMGQRGKDAAFMPSKFVFPGGAVDAVDAEIPFARPPAADCLRRLSLDGANGPALMA AAVREIWEETGLLLGAKDTRAGEITAPKGWRGYLATGHLPDGAALEYVFRAITPAGRPRRFDARFFLVDADALASDPDDF SGAEDELSHLQWIPLDEVRGFDMPFITEVVLSELAAKVEGRAVPGVPFFDNATAESRFRRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23971; Mature: 23840
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKSAIRDAATGILLRDAATRPRVLMGQRGKDAAFMPSKFVFPGGAVDAVDAEIPFARP CCCHHHHHHHHHHHEEECCCCCCCEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC PAADCLRRLSLDGANGPALMAAAVREIWEETGLLLGAKDTRAGEITAPKGWRGYLATGHL CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCEEEECCC PDGAALEYVFRAITPAGRPRRFDARFFLVDADALASDPDDFSGAEDELSHLQWIPLDEVR CCCHHHHHHHHHHCCCCCCCEECCEEEEEECHHHCCCCCCCCCCHHHHHHCCCCCHHHHC GFDMPFITEVVLSELAAKVEGRAVPGVPFFDNATAESRFRRL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure SDKSAIRDAATGILLRDAATRPRVLMGQRGKDAAFMPSKFVFPGGAVDAVDAEIPFARP CCHHHHHHHHHHHEEECCCCCCCEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC PAADCLRRLSLDGANGPALMAAAVREIWEETGLLLGAKDTRAGEITAPKGWRGYLATGHL CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCEEEECCC PDGAALEYVFRAITPAGRPRRFDARFFLVDADALASDPDDFSGAEDELSHLQWIPLDEVR CCCHHHHHHHHHHCCCCCCCEECCEEEEEECHHHCCCCCCCCCCHHHHHHCCCCCHHHHC GFDMPFITEVVLSELAAKVEGRAVPGVPFFDNATAESRFRRL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA