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The map label for this gene is 89055631

Identifier: 89055631

GI number: 89055631

Start: 3178868

End: 3179722

Strand: Direct

Name: 89055631

Synonym: Jann_3140

Alternate gene names: NA

Gene position: 3178868-3179722 (Clockwise)

Preceding gene: 89055628

Following gene: 89055634

Centisome position: 73.62

GC content: 65.96

Gene sequence:

>855_bases
ATGTTCGACAAACGCAGCCGCGCGCAGTTGTTCCGAGAGCGGCTGGTCGCGGCCCTGACCACCTCCGGCCTCAGCCGTGC
CGCCCTGGCCCGCGCGGTGAAGGTGGACCGCTCCACCATAACCCAGATGCTGGCGGAAGATGACGCGCGCGTACCCGGTG
GCCATGTCGTAGCGTCGTGCGCGCAGGCGCTGGATGTGTCCGCCGACTGGCTTCTCGGCCTCACCGACCGGCCCGAACAG
GCGGGCAAACTGCTCGCGTCCAGCCTGTCGATTTCCGAGACCGGGCGCGCCACGACGCTGGATGATCAGATCTTCGAATG
GCAGCGCGAGGCGGAGGGCTACAAGATCCGCCATGTCCCCGCGACCCTGCCCGATATCCTGAAAACCGATGCCGTACTGC
GCTGGGAATACGCCCCCCTCACCCACCGCCGCCCGGATGAGGCGATTGATGCCGCCGCGTCCCGGCTGGATTGGCTGACC
CGGACACTCAGCGATTTTGAGATGGCGATGCCGGTCCATGAGTTGGAATGTTTCGCGCGGGCAGAGGGGTATTATGCAGG
CCTCAGCGCGCAGATCCGGACCGGGCAGCTGGATTGGATGATACAGACCTATGACCGCCTGTTCCCCGGCCTGCGGATCT
TCCTCTATGACGCACGCACCACCTTTTCCGCCCCGGTCACGGTGTTTGGCCCGAAGATGGCGGTGATCTATCTGGGGCGT
CACTATCTGGCGTTCCGGGACCGGGACCGCGTGCACGCCATGGCGCGCCATTTCGACGGGCTGGTGCGCGACGCGACGGT
TGCCTCCCACGACGTGCTGGACTGGCTGAAGGACCTGCGCGCTCAGGTGCGTTGA

Upstream 100 bases:

>100_bases
CTATTCACAGATCCGTGTTACCGCCCCTTGCATGTCAGGAGCAGTCAGGGTTTTCTCTACATTAACCCAACGATGCTGGA
TTTACTCAACGATGCTGGAC

Downstream 100 bases:

>100_bases
GCGACGGATCGCCCGAACCCGTCAGGCAGGGACAACGGCCCATGGGCCACCTTCGCCCGCCCCAGCCAATCGGCAATGCG
CTCAGGCGGCAAAGCAGATG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain Protein; XRE Family Transcriptional Regulator

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MFDKRSRAQLFRERLVAALTTSGLSRAALARAVKVDRSTITQMLAEDDARVPGGHVVASCAQALDVSADWLLGLTDRPEQ
AGKLLASSLSISETGRATTLDDQIFEWQREAEGYKIRHVPATLPDILKTDAVLRWEYAPLTHRRPDEAIDAAASRLDWLT
RTLSDFEMAMPVHELECFARAEGYYAGLSAQIRTGQLDWMIQTYDRLFPGLRIFLYDARTTFSAPVTVFGPKMAVIYLGR
HYLAFRDRDRVHAMARHFDGLVRDATVASHDVLDWLKDLRAQVR

Sequences:

>Translated_284_residues
MFDKRSRAQLFRERLVAALTTSGLSRAALARAVKVDRSTITQMLAEDDARVPGGHVVASCAQALDVSADWLLGLTDRPEQ
AGKLLASSLSISETGRATTLDDQIFEWQREAEGYKIRHVPATLPDILKTDAVLRWEYAPLTHRRPDEAIDAAASRLDWLT
RTLSDFEMAMPVHELECFARAEGYYAGLSAQIRTGQLDWMIQTYDRLFPGLRIFLYDARTTFSAPVTVFGPKMAVIYLGR
HYLAFRDRDRVHAMARHFDGLVRDATVASHDVLDWLKDLRAQVR
>Mature_284_residues
MFDKRSRAQLFRERLVAALTTSGLSRAALARAVKVDRSTITQMLAEDDARVPGGHVVASCAQALDVSADWLLGLTDRPEQ
AGKLLASSLSISETGRATTLDDQIFEWQREAEGYKIRHVPATLPDILKTDAVLRWEYAPLTHRRPDEAIDAAASRLDWLT
RTLSDFEMAMPVHELECFARAEGYYAGLSAQIRTGQLDWMIQTYDRLFPGLRIFLYDARTTFSAPVTVFGPKMAVIYLGR
HYLAFRDRDRVHAMARHFDGLVRDATVASHDVLDWLKDLRAQVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32050; Mature: 32050

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDKRSRAQLFRERLVAALTTSGLSRAALARAVKVDRSTITQMLAEDDARVPGGHVVASC
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AQALDVSADWLLGLTDRPEQAGKLLASSLSISETGRATTLDDQIFEWQREAEGYKIRHVP
HHHHCCCCHHEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECC
ATLPDILKTDAVLRWEYAPLTHRRPDEAIDAAASRLDWLTRTLSDFEMAMPVHELECFAR
CCCHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AEGYYAGLSAQIRTGQLDWMIQTYDRLFPGLRIFLYDARTTFSAPVTVFGPKMAVIYLGR
CCCCEECCCCEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCEEEEEECC
HYLAFRDRDRVHAMARHFDGLVRDATVASHDVLDWLKDLRAQVR
HHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFDKRSRAQLFRERLVAALTTSGLSRAALARAVKVDRSTITQMLAEDDARVPGGHVVASC
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AQALDVSADWLLGLTDRPEQAGKLLASSLSISETGRATTLDDQIFEWQREAEGYKIRHVP
HHHHCCCCHHEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECC
ATLPDILKTDAVLRWEYAPLTHRRPDEAIDAAASRLDWLTRTLSDFEMAMPVHELECFAR
CCCHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AEGYYAGLSAQIRTGQLDWMIQTYDRLFPGLRIFLYDARTTFSAPVTVFGPKMAVIYLGR
CCCCEECCCCEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCEEEEEECC
HYLAFRDRDRVHAMARHFDGLVRDATVASHDVLDWLKDLRAQVR
HHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA