Click here to switch to the map view.

The map label for this gene is 89055600

Identifier: 89055600

GI number: 89055600

Start: 3143503

End: 3144273

Strand: Direct

Name: 89055600

Synonym: Jann_3109

Alternate gene names: NA

Gene position: 3143503-3144273 (Clockwise)

Preceding gene: 89055599

Following gene: 89055601

Centisome position: 72.8

GC content: 59.4

Gene sequence:

>771_bases
ATGAAACTGACACTCGCAATTGCGCTGACAATGACCGCGCTGACCGCCGGAGCCGCATTGGCCCATTACGGGATGATCAT
CCCGTCTGATCCGATGATCAGCCAGCAGGACGGACGCTCCGTCGCCCTTGAGGTGACGTTCTCGCATCCGTTTGAGTTGG
ACGGGATGGAGCTTGTGACGCCCGTGTCGTTTTCCGTCACCCATGAGGGGGAAACGACGGATCTGCTGGAAGAATTGCAA
CCTGCAACGCTGATGGAGGCCGCGGGCTACACGCTCGACTACGATCTGGAGCGTCCCGGCACCTACATCTTTGCGATGGA
GCCCCAGCCCTATTGGGAACCGGCGGAAGACAGCTACATCGTCCATTATACGAAGACCTATGTCAGCGCGTATGATGACG
ATGAAGGCTGGGATGCCCTACTTGGCTTGCGCACCGAGATTGAACCGCTAACCCGCCCCTTCGGCATCTGGGAAGGCAAC
GTGTTCCAGGGCCGTGTCCTGCTGGAAGGCGAGCCCGTGCCCTTCGCTGAGGTCGAGGTTGAATACTTCAACCAAGACGG
CTCTGCCACGTCACCCTCTGACCTGATGATCACCCAGACCATCGTTGCCGATGCCGATGGCATCTTCAGCTATTCCACCC
CCAACGCTGGCTGGTGGGGCTTTGCCGCGCTCAACACCGCGCCGGAAACCCTTGCGTTTGAGGGCGAGGAAAAGGCCGTT
GAACTGGGCGCCGTGATCTGGGTCCACTTCGAGGAATGGACCGGTCAATGA

Upstream 100 bases:

>100_bases
TTGCCATCGTTTTGGCGGTGCAACAATCGGGTGATACAATCGTGGCCTGGCTGCTGGCCACATAACATCAAGACCAACAG
ACATGACACGGGAGACTTCC

Downstream 100 bases:

>100_bases
AACGGCTGATCGCGCTTCTGACGGCGGCGGTGGTATCCTCCACCGCCGCCGTCGCGCACCAGCTTAATGTCTTCGCCTAT
GTCGAAGACGGCACGGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Co2+ Transport System Periplasmic Component; Nickel Transport Complex Subunit NikM; Lipoprotein; ATP-Dependent DNA Ligase; NikK Nickel ECF Transporter

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKLTLAIALTMTALTAGAALAHYGMIIPSDPMISQQDGRSVALEVTFSHPFELDGMELVTPVSFSVTHEGETTDLLEELQ
PATLMEAAGYTLDYDLERPGTYIFAMEPQPYWEPAEDSYIVHYTKTYVSAYDDDEGWDALLGLRTEIEPLTRPFGIWEGN
VFQGRVLLEGEPVPFAEVEVEYFNQDGSATSPSDLMITQTIVADADGIFSYSTPNAGWWGFAALNTAPETLAFEGEEKAV
ELGAVIWVHFEEWTGQ

Sequences:

>Translated_256_residues
MKLTLAIALTMTALTAGAALAHYGMIIPSDPMISQQDGRSVALEVTFSHPFELDGMELVTPVSFSVTHEGETTDLLEELQ
PATLMEAAGYTLDYDLERPGTYIFAMEPQPYWEPAEDSYIVHYTKTYVSAYDDDEGWDALLGLRTEIEPLTRPFGIWEGN
VFQGRVLLEGEPVPFAEVEVEYFNQDGSATSPSDLMITQTIVADADGIFSYSTPNAGWWGFAALNTAPETLAFEGEEKAV
ELGAVIWVHFEEWTGQ
>Mature_256_residues
MKLTLAIALTMTALTAGAALAHYGMIIPSDPMISQQDGRSVALEVTFSHPFELDGMELVTPVSFSVTHEGETTDLLEELQ
PATLMEAAGYTLDYDLERPGTYIFAMEPQPYWEPAEDSYIVHYTKTYVSAYDDDEGWDALLGLRTEIEPLTRPFGIWEGN
VFQGRVLLEGEPVPFAEVEVEYFNQDGSATSPSDLMITQTIVADADGIFSYSTPNAGWWGFAALNTAPETLAFEGEEKAV
ELGAVIWVHFEEWTGQ

Specific function: Unknown

COG id: COG5266

COG function: function code P; ABC-type Co2+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28267; Mature: 28267

Theoretical pI: Translated: 3.68; Mature: 3.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTLAIALTMTALTAGAALAHYGMIIPSDPMISQQDGRSVALEVTFSHPFELDGMELVT
CEEEEEEEEHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEE
PVSFSVTHEGETTDLLEELQPATLMEAAGYTLDYDLERPGTYIFAMEPQPYWEPAEDSYI
CEEEEEEECCCHHHHHHHCCCHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEE
VHYTKTYVSAYDDDEGWDALLGLRTEIEPLTRPFGIWEGNVFQGRVLLEGEPVPFAEVEV
EEEEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEE
EYFNQDGSATSPSDLMITQTIVADADGIFSYSTPNAGWWGFAALNTAPETLAFEGEEKAV
EEECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCEEEEEEECCCCCEEEECCCCCEE
ELGAVIWVHFEEWTGQ
EEEEEEEEEEECCCCC
>Mature Secondary Structure
MKLTLAIALTMTALTAGAALAHYGMIIPSDPMISQQDGRSVALEVTFSHPFELDGMELVT
CEEEEEEEEHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEE
PVSFSVTHEGETTDLLEELQPATLMEAAGYTLDYDLERPGTYIFAMEPQPYWEPAEDSYI
CEEEEEEECCCHHHHHHHCCCHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEE
VHYTKTYVSAYDDDEGWDALLGLRTEIEPLTRPFGIWEGNVFQGRVLLEGEPVPFAEVEV
EEEEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEE
EYFNQDGSATSPSDLMITQTIVADADGIFSYSTPNAGWWGFAALNTAPETLAFEGEEKAV
EEECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCEEEEEEECCCCCEEEECCCCCEE
ELGAVIWVHFEEWTGQ
EEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA