| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055601
Identifier: 89055601
GI number: 89055601
Start: 3144270
End: 3144608
Strand: Direct
Name: 89055601
Synonym: Jann_3110
Alternate gene names: NA
Gene position: 3144270-3144608 (Clockwise)
Preceding gene: 89055600
Following gene: 89055602
Centisome position: 72.82
GC content: 61.06
Gene sequence:
>339_bases ATGAAACGGCTGATCGCGCTTCTGACGGCGGCGGTGGTATCCTCCACCGCCGCCGTCGCGCACCAGCTTAATGTCTTCGC CTATGTCGAAGACGGCACGGTGGTTGTCGAAAGCCGTTTTTCCAACGGAAACCTGCCGCAACTGGGCGAGGTCAGCGTCT TGGACGCCGGGGGCGAAGCGTTGATGCTGCTCCCCCTGCAAGAGGATGGCACCGTTCGTTTTCCGCTTGATCCTGTCCAT GCCGACACGGGCCTTCTGATCGAGGTCCGTACCGGTGAGGGCCATGACAATTACTGGATACTGACGCCCGACGATATCGC TCGCGGGTCGGGGAGTTGA
Upstream 100 bases:
>100_bases CGCTCAACACCGCGCCGGAAACCCTTGCGTTTGAGGGCGAGGAAAAGGCCGTTGAACTGGGCGCCGTGATCTGGGTCCAC TTCGAGGAATGGACCGGTCA
Downstream 100 bases:
>100_bases CGCCATGACGCAGTCCGTTCTGACCCGCCGCACCTTTGGGTCTCTGACCCTGGCGACAACACTGCTTGGGGGCGCGGCCT TTGCGCAGGACCGCCTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKRLIALLTAAVVSSTAAVAHQLNVFAYVEDGTVVVESRFSNGNLPQLGEVSVLDAGGEALMLLPLQEDGTVRFPLDPVH ADTGLLIEVRTGEGHDNYWILTPDDIARGSGS
Sequences:
>Translated_112_residues MKRLIALLTAAVVSSTAAVAHQLNVFAYVEDGTVVVESRFSNGNLPQLGEVSVLDAGGEALMLLPLQEDGTVRFPLDPVH ADTGLLIEVRTGEGHDNYWILTPDDIARGSGS >Mature_112_residues MKRLIALLTAAVVSSTAAVAHQLNVFAYVEDGTVVVESRFSNGNLPQLGEVSVLDAGGEALMLLPLQEDGTVRFPLDPVH ADTGLLIEVRTGEGHDNYWILTPDDIARGSGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11872; Mature: 11872
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLIALLTAAVVSSTAAVAHQLNVFAYVEDGTVVVESRFSNGNLPQLGEVSVLDAGGEA CHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEEEEEECCCCCCCCCCCEEEEECCCCE LMLLPLQEDGTVRFPLDPVHADTGLLIEVRTGEGHDNYWILTPDDIARGSGS EEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEEECCHHHCCCCCC >Mature Secondary Structure MKRLIALLTAAVVSSTAAVAHQLNVFAYVEDGTVVVESRFSNGNLPQLGEVSVLDAGGEA CHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEEEEEECCCCCCCCCCCEEEEECCCCE LMLLPLQEDGTVRFPLDPVHADTGLLIEVRTGEGHDNYWILTPDDIARGSGS EEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEEECCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA