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The map label for this gene is bexD [H]

Identifier: 89055528

GI number: 89055528

Start: 3062843

End: 3063940

Strand: Direct

Name: bexD [H]

Synonym: Jann_3037

Alternate gene names: 89055528

Gene position: 3062843-3063940 (Clockwise)

Preceding gene: 89055527

Following gene: 89055529

Centisome position: 70.93

GC content: 63.57

Gene sequence:

>1098_bases
ATGAGACTTCCAGCCCTACTCATTGCCATCGCACTCGGACTTGCCGCCTGTGGCCCCTCCGACGGCCCCTCTCAGTCGCA
GGTCCGCAGCGATGCGCGGGCCGCAGATGTGCCGATCCTGCCGCTGAACCGGTCTGTCATTGCCGCGCTCGGCACCTCGA
CGCCCGGCGAGGGGTTCTCCCACGTCAGTCAGGTGCCCTATTCACCCGGCGTTATTCGCGCCGGTGACGTGATCACCGTC
CGCGTGTTCGAGACCTCCGATGACGGCATGTTCTCGGTCGAAGATACCTCGACGCTGGATCTCGGTGAATTCGTGGTCTC
GCCCGACGGCTACGTGTCCCTGCCGTTTGTGGGGGCCGTGCGGGTTGCGGGAAATAATGCGACAGGTGCGCAACGGCTGA
TCACCAACGCCCTGCGCGAGTCTGCTGTCGATCCGCAGGCCACTGTTTCGGTAACGGTCAGCGCGACCGATAACTATACG
GTTCAAGGCGGCGTTGCGTCGGGCGGCACGTATCAGCTGACACCGCGCGGTGAGACAATCCTTGATGCACTGGCCTCGGC
GGGCGGTGCCGAGGGTGATCCGAACGAGACGACTATCACCATCCGGCGCGGGAGCGACAGCCGGACAGAGCTTTTGTCGA
CGCTCCTTGCCGATCCGTCCCGCGATGCGACTCTGCGCCCGGGCGATGCGGTGATTGTGGGGGGCGGTCAGGCCAGCTTC
ATTGCCGATGGGGCGTTGTCCTCTCCCGGAGAATTTGACTTCGTCGAAGGCCAGTTGACCCTTGCGCAGGCGATTGCGCG
GGCCGGCGGTTTGCAGGACAGCCGCGCCAATCCACGCGCCGTCTACATCTTCCGACGGATGCCTGTGGGTGAATCGTTTC
TGCTGGAACAACCGCCCGGAAATGATCCGATCCGGGTGGCGGGCGATGTGATTTTCCAGGCCGATTACACCTCTCCCACC
GGGCGCCTGGATGCCGGACAATTCATGCTGCGCGACGGCGATGTGCTTTATGTGGGCAATTCGCCCGTGTCGGAGTTCCT
GAAGTTCTTCCAGATCTTCGAGCGTCCGCCCGAGATCCCTGCCGTTCCCGGTCAGTAA

Upstream 100 bases:

>100_bases
GCTGATCGAAGGCACTCCTCTTGACGCCACCGCGCTCGCCATCTTCCTATCACCGCGCTCCTGACGCGCCCCTTCTCTGC
TCCTGCACAAAGGCCAAGCC

Downstream 100 bases:

>100_bases
ACCTCTGTTAGCGGCGCGATTTAGACGGACCTCAAGCGCTGCTTGCGGGTTGGTTTTTTTGTCGCATGCACGAGTCCGTC
CCGAAAAAGTTGACAGCTGT

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MRLPALLIAIALGLAACGPSDGPSQSQVRSDARAADVPILPLNRSVIAALGTSTPGEGFSHVSQVPYSPGVIRAGDVITV
RVFETSDDGMFSVEDTSTLDLGEFVVSPDGYVSLPFVGAVRVAGNNATGAQRLITNALRESAVDPQATVSVTVSATDNYT
VQGGVASGGTYQLTPRGETILDALASAGGAEGDPNETTITIRRGSDSRTELLSTLLADPSRDATLRPGDAVIVGGGQASF
IADGALSSPGEFDFVEGQLTLAQAIARAGGLQDSRANPRAVYIFRRMPVGESFLLEQPPGNDPIRVAGDVIFQADYTSPT
GRLDAGQFMLRDGDVLYVGNSPVSEFLKFFQIFERPPEIPAVPGQ

Sequences:

>Translated_365_residues
MRLPALLIAIALGLAACGPSDGPSQSQVRSDARAADVPILPLNRSVIAALGTSTPGEGFSHVSQVPYSPGVIRAGDVITV
RVFETSDDGMFSVEDTSTLDLGEFVVSPDGYVSLPFVGAVRVAGNNATGAQRLITNALRESAVDPQATVSVTVSATDNYT
VQGGVASGGTYQLTPRGETILDALASAGGAEGDPNETTITIRRGSDSRTELLSTLLADPSRDATLRPGDAVIVGGGQASF
IADGALSSPGEFDFVEGQLTLAQAIARAGGLQDSRANPRAVYIFRRMPVGESFLLEQPPGNDPIRVAGDVIFQADYTSPT
GRLDAGQFMLRDGDVLYVGNSPVSEFLKFFQIFERPPEIPAVPGQ
>Mature_365_residues
MRLPALLIAIALGLAACGPSDGPSQSQVRSDARAADVPILPLNRSVIAALGTSTPGEGFSHVSQVPYSPGVIRAGDVITV
RVFETSDDGMFSVEDTSTLDLGEFVVSPDGYVSLPFVGAVRVAGNNATGAQRLITNALRESAVDPQATVSVTVSATDNYT
VQGGVASGGTYQLTPRGETILDALASAGGAEGDPNETTITIRRGSDSRTELLSTLLADPSRDATLRPGDAVIVGGGQASF
IADGALSSPGEFDFVEGQLTLAQAIARAGGLQDSRANPRAVYIFRRMPVGESFLLEQPPGNDPIRVAGDVIFQADYTSPT
GRLDAGQFMLRDGDVLYVGNSPVSEFLKFFQIFERPPEIPAVPGQ

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the BexA, BexB and BexC proteins. May function as a membrane anchor for capsular polysaccharides. Possible porin properties [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1788376, Length=370, Percent_Identity=25.1351351351351, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787218, Length=307, Percent_Identity=22.4755700325733, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 37982; Mature: 37982

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPALLIAIALGLAACGPSDGPSQSQVRSDARAADVPILPLNRSVIAALGTSTPGEGFS
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHCCCCEEECCCCEEEEECCCCCCCCHH
HVSQVPYSPGVIRAGDVITVRVFETSDDGMFSVEDTSTLDLGEFVVSPDGYVSLPFVGAV
HHHHCCCCCCEEECCCEEEEEEEECCCCCEEEECCCCCEECCCEEECCCCEEECCCEEEE
RVAGNNATGAQRLITNALRESAVDPQATVSVTVSATDNYTVQGGVASGGTYQLTPRGETI
EEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEECCCCCCCEEEECCCCHHH
LDALASAGGAEGDPNETTITIRRGSDSRTELLSTLLADPSRDATLRPGDAVIVGGGQASF
HHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEECCCCEEEECCCCEEE
IADGALSSPGEFDFVEGQLTLAQAIARAGGLQDSRANPRAVYIFRRMPVGESFLLEQPPG
EECCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEECCCCC
NDPIRVAGDVIFQADYTSPTGRLDAGQFMLRDGDVLYVGNSPVSEFLKFFQIFERPPEIP
CCCEEEEEEEEEEECCCCCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCC
AVPGQ
CCCCC
>Mature Secondary Structure
MRLPALLIAIALGLAACGPSDGPSQSQVRSDARAADVPILPLNRSVIAALGTSTPGEGFS
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHCCCCEEECCCCEEEEECCCCCCCCHH
HVSQVPYSPGVIRAGDVITVRVFETSDDGMFSVEDTSTLDLGEFVVSPDGYVSLPFVGAV
HHHHCCCCCCEEECCCEEEEEEEECCCCCEEEECCCCCEECCCEEECCCCEEECCCEEEE
RVAGNNATGAQRLITNALRESAVDPQATVSVTVSATDNYTVQGGVASGGTYQLTPRGETI
EEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEECCCCCCCEEEECCCCHHH
LDALASAGGAEGDPNETTITIRRGSDSRTELLSTLLADPSRDATLRPGDAVIVGGGQASF
HHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEECCCCEEEECCCCEEE
IADGALSSPGEFDFVEGQLTLAQAIARAGGLQDSRANPRAVYIFRRMPVGESFLLEQPPG
EECCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEECCCCC
NDPIRVAGDVIFQADYTSPTGRLDAGQFMLRDGDVLYVGNSPVSEFLKFFQIFERPPEIP
CCCEEEEEEEEEEECCCCCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCC
AVPGQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2082145 [H]