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The map label for this gene is pdtaR [H]

Identifier: 89055529

GI number: 89055529

Start: 3064221

End: 3064841

Strand: Direct

Name: pdtaR [H]

Synonym: Jann_3038

Alternate gene names: 89055529

Gene position: 3064221-3064841 (Clockwise)

Preceding gene: 89055528

Following gene: 89055530

Centisome position: 70.96

GC content: 60.23

Gene sequence:

>621_bases
ATGTTCAGCGCGCCGCGCTCGACAGCGCAGTTTACCATGACCAGCAACCTCACAATCGTTGTCGTCGAAGAAGACCGGGA
TCGCGCCATGGCGATTGTGGATGCCTTGAAAGATCAAGGCGACGATGCGGTGCATGTGATTGACGACACCTCCGGTTTGT
CACGCAAGATTGCGGCGCTCCACCCAGACATTGTCCTGATCGATATCGACCATCCGACCCGTGATATTATGGAGGAGCTG
ACGCTCGCGTCGGGCCCACTGGAACGCCCCATCGCGATGTTTGTCTCGGGCACGGGCAGCGGGCTGGCGAAAGCGGCGAT
AGAGGCTGGCGTTTCGGCCTATGTTGTGGACGGGCTCCAGCCCGACCGTCTGAAGCCTGTGATGGACGCGGCAATCACCC
GGTTCCAGATCATGCGTCAGATGCGGATCGAGTTGGACGAGACCCGGCGCGCGTTGGAGGACCGCAAGGTGATTGACCGC
GCCAAGGGTCTTTTGATGAAGGCCAAACAGATTGATGAGCAAGCCGCCTACGCCATTCTGCGCAAAGCGGCGATGGATCA
AGGGCTGCGCATAGCGGACGTGGCGCAATCGCTGGTGACAGCGGCGGGATTGCTGCGATGA

Upstream 100 bases:

>100_bases
CTCCAATAGAGAGCGGTGTGTTTTCGGGCTGCCGCAATCATTGTTGCACAATACTTAATCAAAGGCAGTTCGCGGGCCAA
CGGCGGTGTGAAAGCGGTTG

Downstream 100 bases:

>100_bases
AGACAACCTCCGTACCCGTGGCCTACATGCCGTTGATCGACGCTGCACCTCTGATTGTAGGACAGGAGATGGGATTTGCG
GAGGCTGAAGGCATTTCTCT

Product: response regulator receiver/ANTAR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MFSAPRSTAQFTMTSNLTIVVVEEDRDRAMAIVDALKDQGDDAVHVIDDTSGLSRKIAALHPDIVLIDIDHPTRDIMEEL
TLASGPLERPIAMFVSGTGSGLAKAAIEAGVSAYVVDGLQPDRLKPVMDAAITRFQIMRQMRIELDETRRALEDRKVIDR
AKGLLMKAKQIDEQAAYAILRKAAMDQGLRIADVAQSLVTAAGLLR

Sequences:

>Translated_206_residues
MFSAPRSTAQFTMTSNLTIVVVEEDRDRAMAIVDALKDQGDDAVHVIDDTSGLSRKIAALHPDIVLIDIDHPTRDIMEEL
TLASGPLERPIAMFVSGTGSGLAKAAIEAGVSAYVVDGLQPDRLKPVMDAAITRFQIMRQMRIELDETRRALEDRKVIDR
AKGLLMKAKQIDEQAAYAILRKAAMDQGLRIADVAQSLVTAAGLLR
>Mature_206_residues
MFSAPRSTAQFTMTSNLTIVVVEEDRDRAMAIVDALKDQGDDAVHVIDDTSGLSRKIAALHPDIVLIDIDHPTRDIMEEL
TLASGPLERPIAMFVSGTGSGLAKAAIEAGVSAYVVDGLQPDRLKPVMDAAITRFQIMRQMRIELDETRRALEDRKVIDR
AKGLLMKAKQIDEQAAYAILRKAAMDQGLRIADVAQSLVTAAGLLR

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22466; Mature: 22466

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSAPRSTAQFTMTSNLTIVVVEEDRDRAMAIVDALKDQGDDAVHVIDDTSGLSRKIAAL
CCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHC
HPDIVLIDIDHPTRDIMEELTLASGPLERPIAMFVSGTGSGLAKAAIEAGVSAYVVDGLQ
CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEECCCC
PDRLKPVMDAAITRFQIMRQMRIELDETRRALEDRKVIDRAKGLLMKAKQIDEQAAYAIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKAAMDQGLRIADVAQSLVTAAGLLR
HHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSAPRSTAQFTMTSNLTIVVVEEDRDRAMAIVDALKDQGDDAVHVIDDTSGLSRKIAAL
CCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHC
HPDIVLIDIDHPTRDIMEELTLASGPLERPIAMFVSGTGSGLAKAAIEAGVSAYVVDGLQ
CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEECCCC
PDRLKPVMDAAITRFQIMRQMRIELDETRRALEDRKVIDRAKGLLMKAKQIDEQAAYAIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKAAMDQGLRIADVAQSLVTAAGLLR
HHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]