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The map label for this gene is 89055519

Identifier: 89055519

GI number: 89055519

Start: 3049778

End: 3050575

Strand: Direct

Name: 89055519

Synonym: Jann_3028

Alternate gene names: NA

Gene position: 3049778-3050575 (Clockwise)

Preceding gene: 89055518

Following gene: 89055520

Centisome position: 70.63

GC content: 69.3

Gene sequence:

>798_bases
GTGACCACTTCCACTGACACGATCGCCTCCCTTCTGTCCCGCGATGCGCTGGAGGACGCGCGGACCCAGTCCGCCGCCGC
CGTCAAGGCCGCCCCACAGGACACCGACGCGCGCCTGACGCTGGCCCAGATCTGCGCCATCGCCGGTGACCTGCCCCGCG
CTGAAACCCACGCCCGCATGGCCCAGACCCTGGATGAGGCCCGCACCATGGCGCTGGCGGAATTCCGGCAATACCTGCGC
GCATTGGAGGCGCGGGCGCAGTGGTGGGACGCAGGCGCCGTGCCCGATATGCCCGGCGGGCCGACCGCGCTGGATCAACT
GGCGATGGCAGGTCACGTGGCGCATCTGGCAGGCGACATGGACGGAGCCGTGCGCGCCGCAACCGATCTGGAAGAGGCCC
GCCCCGCCTGCACCGGGACAATAGATGGCACCGCGTTTGACGATCTGCGCGATGTCGATGACCGCCTGCCCCACGCTTTG
GAAGTGCTGACGCCGGGGGGTCACTACCTGTGGCTCGACCTTTCCCGCGTGGCGCGCGTCGACCTCGCGCCCGTCGCCGC
GCCGTTTGATCTGATCGCCCGGCCCGCCCGTGTGGCGTTGCGCGACGGCTCCACCGCCGATCTGTGCTTGCCCGCCGTCT
ATGACGCACCACGCACTGCGCAGGAACAGCTTGGCCGCGTGACGGAGTTCGAAGAGCTCGCACCCGGCCTTGTGCGCGGT
TACGGCCAACGGGCCTGGCTTGCGGGCGACGATCTGGTGGGTCTCACCGATCCGGCGGAGATCACATTAGATGAATAG

Upstream 100 bases:

>100_bases
CCGCGCGGATACACCTGCAGCCGCATTTCCAACTCGATGACATATCGACCAGTTTCCACCTTGTCTCCGAGGCCCCGGCG
GGCTTGGAAAGGACCTCTGC

Downstream 100 bases:

>100_bases
GGACCGGCGGCTTCATCTTGGAATGCGGGATGCCCCGCGTGGCGGCGACGATGCCCGCCTGCAATCGGCGCTGCTTGACC
GGTTGATCGATCTGGACCCC

Product: virulence protein, SciE type

Products: NA

Alternate protein names: SciE Type Virulence Protein; ImpE Family Protein; Avirulence Locus Protein; Virulence-Island/Protein Involved In Nitrogen Fixation; Cytoplasmic Protein SciE; Protein Of Avirulence Locus ImpE

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MTTSTDTIASLLSRDALEDARTQSAAAVKAAPQDTDARLTLAQICAIAGDLPRAETHARMAQTLDEARTMALAEFRQYLR
ALEARAQWWDAGAVPDMPGGPTALDQLAMAGHVAHLAGDMDGAVRAATDLEEARPACTGTIDGTAFDDLRDVDDRLPHAL
EVLTPGGHYLWLDLSRVARVDLAPVAAPFDLIARPARVALRDGSTADLCLPAVYDAPRTAQEQLGRVTEFEELAPGLVRG
YGQRAWLAGDDLVGLTDPAEITLDE

Sequences:

>Translated_265_residues
MTTSTDTIASLLSRDALEDARTQSAAAVKAAPQDTDARLTLAQICAIAGDLPRAETHARMAQTLDEARTMALAEFRQYLR
ALEARAQWWDAGAVPDMPGGPTALDQLAMAGHVAHLAGDMDGAVRAATDLEEARPACTGTIDGTAFDDLRDVDDRLPHAL
EVLTPGGHYLWLDLSRVARVDLAPVAAPFDLIARPARVALRDGSTADLCLPAVYDAPRTAQEQLGRVTEFEELAPGLVRG
YGQRAWLAGDDLVGLTDPAEITLDE
>Mature_264_residues
TTSTDTIASLLSRDALEDARTQSAAAVKAAPQDTDARLTLAQICAIAGDLPRAETHARMAQTLDEARTMALAEFRQYLRA
LEARAQWWDAGAVPDMPGGPTALDQLAMAGHVAHLAGDMDGAVRAATDLEEARPACTGTIDGTAFDDLRDVDDRLPHALE
VLTPGGHYLWLDLSRVARVDLAPVAAPFDLIARPARVALRDGSTADLCLPAVYDAPRTAQEQLGRVTEFEELAPGLVRGY
GQRAWLAGDDLVGLTDPAEITLDE

Specific function: Unknown

COG id: COG4455

COG function: function code R; Protein of avirulence locus involved in temperature-dependent protein secretion

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28262; Mature: 28131

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSTDTIASLLSRDALEDARTQSAAAVKAAPQDTDARLTLAQICAIAGDLPRAETHARM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
AQTLDEARTMALAEFRQYLRALEARAQWWDAGAVPDMPGGPTALDQLAMAGHVAHLAGDM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
DGAVRAATDLEEARPACTGTIDGTAFDDLRDVDDRLPHALEVLTPGGHYLWLDLSRVARV
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHEEEECCCCCEEEEEHHHHHHH
DLAPVAAPFDLIARPARVALRDGSTADLCLPAVYDAPRTAQEQLGRVTEFEELAPGLVRG
HHHHCCCCHHHHHCCHHHEECCCCCCHHHHHHHHCCCCHHHHHHCCHHHHHHHCCHHHHH
YGQRAWLAGDDLVGLTDPAEITLDE
CCCCEEECCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
TTSTDTIASLLSRDALEDARTQSAAAVKAAPQDTDARLTLAQICAIAGDLPRAETHARM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
AQTLDEARTMALAEFRQYLRALEARAQWWDAGAVPDMPGGPTALDQLAMAGHVAHLAGDM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
DGAVRAATDLEEARPACTGTIDGTAFDDLRDVDDRLPHALEVLTPGGHYLWLDLSRVARV
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHEEEECCCCCEEEEEHHHHHHH
DLAPVAAPFDLIARPARVALRDGSTADLCLPAVYDAPRTAQEQLGRVTEFEELAPGLVRG
HHHHCCCCHHHHHCCHHHEECCCCCCHHHHHHHHCCCCHHHHHHCCHHHHHHHCCHHHHH
YGQRAWLAGDDLVGLTDPAEITLDE
CCCCEEECCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA