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The map label for this gene is 89055520

Identifier: 89055520

GI number: 89055520

Start: 3050568

End: 3051110

Strand: Direct

Name: 89055520

Synonym: Jann_3029

Alternate gene names: NA

Gene position: 3050568-3051110 (Clockwise)

Preceding gene: 89055519

Following gene: 89055521

Centisome position: 70.65

GC content: 68.14

Gene sequence:

>543_bases
ATGAATAGGGACCGGCGGCTTCATCTTGGAATGCGGGATGCCCCGCGTGGCGGCGACGATGCCCGCCTGCAATCGGCGCT
GCTTGACCGGTTGATCGATCTGGACCCCGATCTGACTGAGGATCCCGCCGTGACGGAGGCCGAGACTTTCGCTGGCCTGC
GCGCTGCCCTGCGCCGCGATCTGGAGATGTTGCTCAATACCCGCGCCGTGCCTGAGACGCCCGCCCCGGGCCTGACGGAG
CTGGCCGACAGCGCGCTGTCCTACGGCAGCCTCGATTTCTTCTCCGCCCATCTGACGACCGACGGCCAGCGGACGGCCTT
CGCGCTGGATCTCAAGACCCGGATCGAGCGGTTTGAGCCACGCCTCCGCGATCTCTCCGTTGATCTGGTGTCAGACCCCA
ACCCCAGCCGCCGCAAGTTGCGCCTGCGCATTGCCGCGCGCCACGTGGCCCGCCCCGGTCTGCCGCCGATGGTGTTCGAG
ACGGCGATGGATCCCGTCGCCGGGCGCTTCACGGTCACCGATGCTGCGGGAGAGCGCACGTGA

Upstream 100 bases:

>100_bases
GAAGAGCTCGCACCCGGCCTTGTGCGCGGTTACGGCCAACGGGCCTGGCTTGCGGGCGACGATCTGGTGGGTCTCACCGA
TCCGGCGGAGATCACATTAG

Downstream 100 bases:

>100_bases
CCAACCGCTTCCTGGAATTCTACAATACTGAACTGGCCGCCCTGCGCCACCGCGCCACGCGCTTTGCCGAAGCGCATCCC
AAGATCGCCGGGCGGCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Lysozyme-Related Protein

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MNRDRRLHLGMRDAPRGGDDARLQSALLDRLIDLDPDLTEDPAVTEAETFAGLRAALRRDLEMLLNTRAVPETPAPGLTE
LADSALSYGSLDFFSAHLTTDGQRTAFALDLKTRIERFEPRLRDLSVDLVSDPNPSRRKLRLRIAARHVARPGLPPMVFE
TAMDPVAGRFTVTDAAGERT

Sequences:

>Translated_180_residues
MNRDRRLHLGMRDAPRGGDDARLQSALLDRLIDLDPDLTEDPAVTEAETFAGLRAALRRDLEMLLNTRAVPETPAPGLTE
LADSALSYGSLDFFSAHLTTDGQRTAFALDLKTRIERFEPRLRDLSVDLVSDPNPSRRKLRLRIAARHVARPGLPPMVFE
TAMDPVAGRFTVTDAAGERT
>Mature_180_residues
MNRDRRLHLGMRDAPRGGDDARLQSALLDRLIDLDPDLTEDPAVTEAETFAGLRAALRRDLEMLLNTRAVPETPAPGLTE
LADSALSYGSLDFFSAHLTTDGQRTAFALDLKTRIERFEPRLRDLSVDLVSDPNPSRRKLRLRIAARHVARPGLPPMVFE
TAMDPVAGRFTVTDAAGERT

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19944; Mature: 19944

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRDRRLHLGMRDAPRGGDDARLQSALLDRLIDLDPDLTEDPAVTEAETFAGLRAALRRD
CCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LEMLLNTRAVPETPAPGLTELADSALSYGSLDFFSAHLTTDGQRTAFALDLKTRIERFEP
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHEEEECCCCCCEEEEEHHHHHHHHHCH
RLRDLSVDLVSDPNPSRRKLRLRIAARHVARPGLPPMVFETAMDPVAGRFTVTDAAGERT
HHHHCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MNRDRRLHLGMRDAPRGGDDARLQSALLDRLIDLDPDLTEDPAVTEAETFAGLRAALRRD
CCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LEMLLNTRAVPETPAPGLTELADSALSYGSLDFFSAHLTTDGQRTAFALDLKTRIERFEP
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHEEEECCCCCCEEEEEHHHHHHHHHCH
RLRDLSVDLVSDPNPSRRKLRLRIAARHVARPGLPPMVFETAMDPVAGRFTVTDAAGERT
HHHHCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA