Click here to switch to the map view.

The map label for this gene is 89055498

Identifier: 89055498

GI number: 89055498

Start: 3027826

End: 3028413

Strand: Direct

Name: 89055498

Synonym: Jann_3007

Alternate gene names: NA

Gene position: 3027826-3028413 (Clockwise)

Preceding gene: 89055497

Following gene: 89055500

Centisome position: 70.12

GC content: 59.52

Gene sequence:

>588_bases
TTGACAGCGGGACCGAGCGGATCATTGACAGCGCCGTCGAGGCCTGGGTGCCTGAATCTGACACCTAGGCGGCCTTCGCG
TGACGGGACCACTGTCCGTCACTTTGGCACCCCTGCCCGGCGAAGTTCTGTTATCCTGGATCACCCACCACGCGGACTTT
TATGGTGTTACACCGCTGACAATGCTGCGCCATGGACTGCCGGAGGCGACATCGCTTCGAGCAATCGACCTTACCCTAAC
CAAAGCCCAAGCGGACCGGTTTGCGGAGATATTCGGCGTCAGCCCGAAGGTTGTACTCAGCCGAGCTTCGCCCAGGCCCC
CAGTGCTGCTCACCGGTTCATCGCCAAGACACCTATGCAGCAGTGTGCGTGTTGCTCTCAGACCGACATTGGTTCACCGC
CGATCCTGCGGAGCGATCTGCAAGGATGGCGAATTACGTGCCCGTTTTGCGGGGAAACCTATCAGGACAAGACCAACCGC
CATTGCACCCCAGCGTTCAAGTCCTACGGCACCACCTCACGTTGCGGCGAAACCTTGATGAACGACCATGCAGAACATGG
CGCCGAAACCTGGTTCCCTGCTCTGTAG

Upstream 100 bases:

>100_bases
TCTGTGCTGACACCTGAATCCCTTCGGCGCATTCTGTAGATCACGGACGGGATCACAGCCAACATCTTCCAGATTCTGGG
CAGCCTCGCGATCAAGGCCA

Downstream 100 bases:

>100_bases
ATCGCGCGCCTTCTCCTCATGCGCCGTATACCTTGGCCACCTCCGCGCGACGGCGATATTTGGCGATACCGCCTCCTCCG
CGCCATCGTTCCCGATCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTAGPSGSLTAPSRPGCLNLTPRRPSRDGTTVRHFGTPARRSSVILDHPPRGLLWCYTADNAAPWTAGGDIASSNRPYPN
QSPSGPVCGDIRRQPEGCTQPSFAQAPSAAHRFIAKTPMQQCACCSQTDIGSPPILRSDLQGWRITCPFCGETYQDKTNR
HCTPAFKSYGTTSRCGETLMNDHAEHGAETWFPAL

Sequences:

>Translated_195_residues
MTAGPSGSLTAPSRPGCLNLTPRRPSRDGTTVRHFGTPARRSSVILDHPPRGLLWCYTADNAAPWTAGGDIASSNRPYPN
QSPSGPVCGDIRRQPEGCTQPSFAQAPSAAHRFIAKTPMQQCACCSQTDIGSPPILRSDLQGWRITCPFCGETYQDKTNR
HCTPAFKSYGTTSRCGETLMNDHAEHGAETWFPAL
>Mature_194_residues
TAGPSGSLTAPSRPGCLNLTPRRPSRDGTTVRHFGTPARRSSVILDHPPRGLLWCYTADNAAPWTAGGDIASSNRPYPNQ
SPSGPVCGDIRRQPEGCTQPSFAQAPSAAHRFIAKTPMQQCACCSQTDIGSPPILRSDLQGWRITCPFCGETYQDKTNRH
CTPAFKSYGTTSRCGETLMNDHAEHGAETWFPAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21061; Mature: 20929

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGPSGSLTAPSRPGCLNLTPRRPSRDGTTVRHFGTPARRSSVILDHPPRGLLWCYTAD
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEEEECC
NAAPWTAGGDIASSNRPYPNQSPSGPVCGDIRRQPEGCTQPSFAQAPSAAHRFIAKTPMQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCHHHHHHHHHCHHH
QCACCSQTDIGSPPILRSDLQGWRITCPFCGETYQDKTNRHCTPAFKSYGTTSRCGETLM
HHHHCCCCCCCCCCCCHHCCCCCEEECCCCCCCHHHCCCCCCCHHHHHCCCHHHHHHHHH
NDHAEHGAETWFPAL
HHHHHHCCCCCCCCC
>Mature Secondary Structure 
TAGPSGSLTAPSRPGCLNLTPRRPSRDGTTVRHFGTPARRSSVILDHPPRGLLWCYTAD
CCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEEEECC
NAAPWTAGGDIASSNRPYPNQSPSGPVCGDIRRQPEGCTQPSFAQAPSAAHRFIAKTPMQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCHHHHHHHHHCHHH
QCACCSQTDIGSPPILRSDLQGWRITCPFCGETYQDKTNRHCTPAFKSYGTTSRCGETLM
HHHHCCCCCCCCCCCCHHCCCCCEEECCCCCCCHHHCCCCCCCHHHHHCCCHHHHHHHHH
NDHAEHGAETWFPAL
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA