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The map label for this gene is 89055497

Identifier: 89055497

GI number: 89055497

Start: 3026271

End: 3027764

Strand: Direct

Name: 89055497

Synonym: Jann_3006

Alternate gene names: NA

Gene position: 3026271-3027764 (Clockwise)

Preceding gene: 89055495

Following gene: 89055498

Centisome position: 70.09

GC content: 59.91

Gene sequence:

>1494_bases
ATGCCGGTCCCGGGGACATCGCGCACCTCTCGCCCCCTCGAGATTGTTCAAATCGACCACAAGAAGGCCGACATCTTTGC
TGTTGATGAGGAAACCGGCAAACCCATCGGACGGCCCTGGCTGATCCTGGCCATGGACGTCTTCAGCCGCATGGTGACGG
GGTTCTACCTGACAATGGATGCGCCATCCCGGCTTTCGACGAGCCTCTGCCTGCTGCACTCGGTCTATGGTAAGACTGCC
TGGCTGAAAGCGCGCGAGATCAATGAACCCTGGGCCGTCGCCGGTCTTCCGGATCGGGTTCATGTGGATAATAGTGCGGA
TTTTCGTAGTCGTGCCTTCAAGCGTGGCTGTGAGAATGCGGGCATTGCCATAGATTGGCGGCCACCGGGCACGCCGCGCT
TCGGCGGGCAAATCGAGCGTTTAATAGGCACCCAGATGGGACGGCTGCATCTTCTGCCCGGCACGACATTTAGCAATGCC
CAAGACCTCGCGGAGTATGACTCAAAGAAGCATGCGGCGCTGACCTTGCGCGAGTTAGAGCGCTATATCGCTCTTGATAT
CGTCGGATCCTATCATCAATCCATACACAGCTTCCTGAGCCGCCCTCCCCTCGCCGTCTGCCGGGATCGCGAAGGCGAGA
TCCCTTTGTGGCTACCGCAGGATCGGCTTCAGTTCTGGGTCTCCTTCCTGCCCGAACAGGAGCGGACCCTGAGGCCGACC
GGCATCCATCTGTTTGGTTTGCACTACTGCTCCGCGGCACTCAGCGCCGATGTGGGCCGGACAAAGCGGCGGCTTCTGGT
GAAGTATGATCCGCGCGATATGTCTCGTGTTTTTGCGCGGCGACCCTCACGTCGCTGGGTGCTTTACCCGCGCGCCAACC
AAGCTCTCAAGCGCCCTGAGGCGCTGCTCGAGCATCCAAGAGGCGCGCGCATGCCTTCAGTCGCGATCTATGGTGACAGC
GGGATGGGCAAGACCATGGGACGGTTCCGGGACCAGCACCTCCCAAGCCTTGATAGTCGAACTGGCATTGTGAACACACC
AGTTCTGGCGATGGAAATGGTCAGCCTCCCAGGAGAGCGGCGGTTCTACGGCGAGCTTCTCAGCCTCCTCGGCGCGCCGC
AGGCACCACGGGCCGATATCGCGCTGATGGAACAGGCCTCCCTGCGGATTATGAAGGCGATCGGCGTTCAGGTCCTGGTC
ATCGACGAGGTTCACAACATCCTTGCCGGAACCTACCGAGAACAACGTATCGTACTGAATATGCTGCGCTTCCTCAGCAA
TCGGCTTCAGATATCGCTGGTCTGTTTTGGGGTGAACGACGCCCGCGAGGCCATTGGCGGGGACGTTCAGCTCGCGCGCC
GTTTCGAGCAACTCACCTTGAACCGTTGGGCCGCCAACGAAGACTTCGAAACGCTCGTCGCATCGATCCTGCGCAATACT
CCCTTGCAGCAACCGTCTGTGCTGACACCTGAATCCCTTCGGCGCATTCTGTAG

Upstream 100 bases:

>100_bases
TGAAGCCGCCGCATCGTCGGACGATCGAAAAGCGGTTAGGTAACGTGGACCTGCGCCACGGGCACAGCGCCGAGGCGAGA
CGTAGATCGAAAAAGCGACA

Downstream 100 bases:

>100_bases
ATCACGGACGGGATCACAGCCAACATCTTCCAGATTCTGGGCAGCCTCGCGATCAAGGCCATTGACAGCGGGACCGAGCG
GATCATTGACAGCGCCGTCG

Product: TniB

Products: NA

Alternate protein names: ORF 480 [H]

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MPVPGTSRTSRPLEIVQIDHKKADIFAVDEETGKPIGRPWLILAMDVFSRMVTGFYLTMDAPSRLSTSLCLLHSVYGKTA
WLKAREINEPWAVAGLPDRVHVDNSADFRSRAFKRGCENAGIAIDWRPPGTPRFGGQIERLIGTQMGRLHLLPGTTFSNA
QDLAEYDSKKHAALTLRELERYIALDIVGSYHQSIHSFLSRPPLAVCRDREGEIPLWLPQDRLQFWVSFLPEQERTLRPT
GIHLFGLHYCSAALSADVGRTKRRLLVKYDPRDMSRVFARRPSRRWVLYPRANQALKRPEALLEHPRGARMPSVAIYGDS
GMGKTMGRFRDQHLPSLDSRTGIVNTPVLAMEMVSLPGERRFYGELLSLLGAPQAPRADIALMEQASLRIMKAIGVQVLV
IDEVHNILAGTYREQRIVLNMLRFLSNRLQISLVCFGVNDAREAIGGDVQLARRFEQLTLNRWAANEDFETLVASILRNT
PLQQPSVLTPESLRRIL

Sequences:

>Translated_497_residues
MPVPGTSRTSRPLEIVQIDHKKADIFAVDEETGKPIGRPWLILAMDVFSRMVTGFYLTMDAPSRLSTSLCLLHSVYGKTA
WLKAREINEPWAVAGLPDRVHVDNSADFRSRAFKRGCENAGIAIDWRPPGTPRFGGQIERLIGTQMGRLHLLPGTTFSNA
QDLAEYDSKKHAALTLRELERYIALDIVGSYHQSIHSFLSRPPLAVCRDREGEIPLWLPQDRLQFWVSFLPEQERTLRPT
GIHLFGLHYCSAALSADVGRTKRRLLVKYDPRDMSRVFARRPSRRWVLYPRANQALKRPEALLEHPRGARMPSVAIYGDS
GMGKTMGRFRDQHLPSLDSRTGIVNTPVLAMEMVSLPGERRFYGELLSLLGAPQAPRADIALMEQASLRIMKAIGVQVLV
IDEVHNILAGTYREQRIVLNMLRFLSNRLQISLVCFGVNDAREAIGGDVQLARRFEQLTLNRWAANEDFETLVASILRNT
PLQQPSVLTPESLRRIL
>Mature_496_residues
PVPGTSRTSRPLEIVQIDHKKADIFAVDEETGKPIGRPWLILAMDVFSRMVTGFYLTMDAPSRLSTSLCLLHSVYGKTAW
LKAREINEPWAVAGLPDRVHVDNSADFRSRAFKRGCENAGIAIDWRPPGTPRFGGQIERLIGTQMGRLHLLPGTTFSNAQ
DLAEYDSKKHAALTLRELERYIALDIVGSYHQSIHSFLSRPPLAVCRDREGEIPLWLPQDRLQFWVSFLPEQERTLRPTG
IHLFGLHYCSAALSADVGRTKRRLLVKYDPRDMSRVFARRPSRRWVLYPRANQALKRPEALLEHPRGARMPSVAIYGDSG
MGKTMGRFRDQHLPSLDSRTGIVNTPVLAMEMVSLPGERRFYGELLSLLGAPQAPRADIALMEQASLRIMKAIGVQVLVI
DEVHNILAGTYREQRIVLNMLRFLSNRLQISLVCFGVNDAREAIGGDVQLARRFEQLTLNRWAANEDFETLVASILRNTP
LQQPSVLTPESLRRIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR015378
- InterPro:   IPR009004 [H]

Pfam domain/function: PF09299 Mu-transpos_C; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 56125; Mature: 55994

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVPGTSRTSRPLEIVQIDHKKADIFAVDEETGKPIGRPWLILAMDVFSRMVTGFYLTMD
CCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCEEEEEC
APSRLSTSLCLLHSVYGKTAWLKAREINEPWAVAGLPDRVHVDNSADFRSRAFKRGCENA
CCHHHHHHHHHHHHHHCCHHEEEHHCCCCCEEECCCCCCEECCCCCHHHHHHHHCCCCCC
GIAIDWRPPGTPRFGGQIERLIGTQMGRLHLLPGTTFSNAQDLAEYDSKKHAALTLRELE
CEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHH
RYIALDIVGSYHQSIHSFLSRPPLAVCRDREGEIPLWLPQDRLQFWVSFLPEQERTLRPT
HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCC
GIHLFGLHYCSAALSADVGRTKRRLLVKYDPRDMSRVFARRPSRRWVLYPRANQALKRPE
CEEEHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCEEEECCCCHHHHCCH
ALLEHPRGARMPSVAIYGDSGMGKTMGRFRDQHLPSLDSRTGIVNTPVLAMEMVSLPGER
HHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCH
RFYGELLSLLGAPQAPRADIALMEQASLRIMKAIGVQVLVIDEVHNILAGTYREQRIVLN
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCHHHHHHHHH
MLRFLSNRLQISLVCFGVNDAREAIGGDVQLARRFEQLTLNRWAANEDFETLVASILRNT
HHHHHCCCEEEEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PLQQPSVLTPESLRRIL
CCCCCCCCCHHHHHHCC
>Mature Secondary Structure 
PVPGTSRTSRPLEIVQIDHKKADIFAVDEETGKPIGRPWLILAMDVFSRMVTGFYLTMD
CCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCEEEEEC
APSRLSTSLCLLHSVYGKTAWLKAREINEPWAVAGLPDRVHVDNSADFRSRAFKRGCENA
CCHHHHHHHHHHHHHHCCHHEEEHHCCCCCEEECCCCCCEECCCCCHHHHHHHHCCCCCC
GIAIDWRPPGTPRFGGQIERLIGTQMGRLHLLPGTTFSNAQDLAEYDSKKHAALTLRELE
CEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHH
RYIALDIVGSYHQSIHSFLSRPPLAVCRDREGEIPLWLPQDRLQFWVSFLPEQERTLRPT
HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCC
GIHLFGLHYCSAALSADVGRTKRRLLVKYDPRDMSRVFARRPSRRWVLYPRANQALKRPE
CEEEHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCEEEECCCCHHHHCCH
ALLEHPRGARMPSVAIYGDSGMGKTMGRFRDQHLPSLDSRTGIVNTPVLAMEMVSLPGER
HHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCH
RFYGELLSLLGAPQAPRADIALMEQASLRIMKAIGVQVLVIDEVHNILAGTYREQRIVLN
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCHHHHHHHHH
MLRFLSNRLQISLVCFGVNDAREAIGGDVQLARRFEQLTLNRWAANEDFETLVASILRNT
HHHHHCCCEEEEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PLQQPSVLTPESLRRIL
CCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2170815 [H]