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The map label for this gene is recJ [H]

Identifier: 89055493

GI number: 89055493

Start: 3021889

End: 3023637

Strand: Direct

Name: recJ [H]

Synonym: Jann_3002

Alternate gene names: 89055493

Gene position: 3021889-3023637 (Clockwise)

Preceding gene: 89055492

Following gene: 89055494

Centisome position: 69.98

GC content: 65.69

Gene sequence:

>1749_bases
GTGTCCGTAAGCTTTCTTGGCGTCGAGGCATCGCTGACCGGCCGCCGCTGGATCGGCCCCTCCGACGATGTGGAACGCCT
GGCCCAGACACTGATACAGCGCGCCGACCTGGACCCTGCCGTCGCAGCGATCCTCGCGCGTCGTGGCGTGCAGCCCGACG
ACGTTGCGAGCTTTCTGGCCCCCGCCCTTCGCGATTTGCTGCCGGACCCGATGAGCCTGAAGGATATGGCCCCTGCGGCC
ACACGGTTAGTGGAGGCCGCCCGAAAAGGGAAGCGTATCGCGATTTTCGCCGACTATGACGTGGACGGCGGATCTTCTGC
CGCGCTGCTGATCTGGTGGCTGCGCGCGCTGGGGCGGCAGGCGACGCTCTATATTCCGGATCGGATTGATGAAGGTTATG
GCCCGAATGATGAGGCGATGGCCGCGCTTGCCCGCGGCCACGACCTGATCATCTGCGTTGATTGCGGCACGTTATCCCAT
GGCCCTATTGCGGCGGCCAAGGGCGCGGATGTGATGGTTCTAGACCACCATCTGGCAACGGCAGAGCTGCCTGAATGTGT
GGCCGTCGTGAACCCCAACCGCCAGGACGAGGATGGCGCGAGCGGGCATCTGTGTGCGGCAGGCGTCGTGTTTCTCGTGC
TGGTCGATGCCAACCGTCGGATGCGGGAGGCGGGCGAGCAGGGCCCGGACCTGATGGGTTTGCTTGACCTGGTGGCCCTT
GCCACTGTGGCTGATGTGGCGCCATTGATCGGTGTGAACCGCGCGCTGGTGGTGCAGGGGCTGAAGGTGATGGCCAGACG
GCAACGCCCGGGCCTCGTGGCCCTGTCGGATGTGGGGCGGCTCGATCGCGCGCCGACGTCCTATCACCTAGGCTTCGTTC
TTGGACCCCGTGTGAATGCAGGTGGGCGCATCGGAGCAGCAGATTTGGGCGCGCGATGCCTTTCGACTGACGACATGGCC
GAAGCCGTGAAATTGGCGGCGCAACTGGACACGCTCAACACCGACCGCCGCGAGATTGAGCAGCGCGTGCGTGAAGCCGC
GCTGGTACAGGCGGAGGCACGTGGGCTGGAAGCCCCGCTGGTCTGGGCCGCCGAGGACGGCTGGCATCCGGGGGTCGTGG
GCATTGTTGCCAGCCGCCTGAAAGACCACACGCGCCGCCCCGCCATTGTCATCGGTTTTGACGGAGACGACGGCAAAGGT
TCGGGTCGCTCAATGGCGGGGGTCGACCTTGGGGCGTCAATCCAGAAACTGGCCGCCGAAGGGCTGATCCAGAAGGGCGG
CGGTCACAAGATGGCCGCCGGTCTGTCGCTGTCGCGCGCGCAACTTGAACCCGCCATGGAGCGCCTGACGGAGCTTTTGG
CCAAACAAGGTGCTGGCACTGGCGGACCTGCGGACCTGCGTCTGGACGGAACCATCATGACCTCCGCCGCGACGCCTGAG
TTGATCGAGAAAATCGAGGCGGCCGGTCCCTATGGCGCAGGCGCCCCTGCCCCCCGCTTCGCCCTGCCCGCCCTGCGCAT
CCGCCATACAAGACCCGTGGGCGAGACCCACCTGAAACTGACGCTCGGCGATGGCGGCCCGGTCACGATAGATGCTATCT
GCTTTGACGCCGTCCGCTCGGGCCTCGATGAATTGCAGGCCCATAATGGTCGCAGCGTCCATGTGGCAGGACGGGTGGAG
CTGAACCACTGGCAAGGCCGCACGCGGGTTCAATTGCGCCTAGATGACGCGGCTTGGGCCGACGAGTGA

Upstream 100 bases:

>100_bases
TCAGCCCCCAGGTCATCCACAACACTGCCATCAGCCATCTGCACAATGAGTTCGCCAATGCGCTGTCCACCCAAGCCATT
CTGACTGAGGGACCCTGATC

Downstream 100 bases:

>100_bases
CGCAAAGACCAAATCCCGCGAAGAATCCTCTTGAACCCCCGGCCCGCATTTTCTAAAGACGCGCTACCGCCAAGCGCGGC
CCGTTCGTCTATCGGTTAGG

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 582; Mature: 581

Protein sequence:

>582_residues
MSVSFLGVEASLTGRRWIGPSDDVERLAQTLIQRADLDPAVAAILARRGVQPDDVASFLAPALRDLLPDPMSLKDMAPAA
TRLVEAARKGKRIAIFADYDVDGGSSAALLIWWLRALGRQATLYIPDRIDEGYGPNDEAMAALARGHDLIICVDCGTLSH
GPIAAAKGADVMVLDHHLATAELPECVAVVNPNRQDEDGASGHLCAAGVVFLVLVDANRRMREAGEQGPDLMGLLDLVAL
ATVADVAPLIGVNRALVVQGLKVMARRQRPGLVALSDVGRLDRAPTSYHLGFVLGPRVNAGGRIGAADLGARCLSTDDMA
EAVKLAAQLDTLNTDRREIEQRVREAALVQAEARGLEAPLVWAAEDGWHPGVVGIVASRLKDHTRRPAIVIGFDGDDGKG
SGRSMAGVDLGASIQKLAAEGLIQKGGGHKMAAGLSLSRAQLEPAMERLTELLAKQGAGTGGPADLRLDGTIMTSAATPE
LIEKIEAAGPYGAGAPAPRFALPALRIRHTRPVGETHLKLTLGDGGPVTIDAICFDAVRSGLDELQAHNGRSVHVAGRVE
LNHWQGRTRVQLRLDDAAWADE

Sequences:

>Translated_582_residues
MSVSFLGVEASLTGRRWIGPSDDVERLAQTLIQRADLDPAVAAILARRGVQPDDVASFLAPALRDLLPDPMSLKDMAPAA
TRLVEAARKGKRIAIFADYDVDGGSSAALLIWWLRALGRQATLYIPDRIDEGYGPNDEAMAALARGHDLIICVDCGTLSH
GPIAAAKGADVMVLDHHLATAELPECVAVVNPNRQDEDGASGHLCAAGVVFLVLVDANRRMREAGEQGPDLMGLLDLVAL
ATVADVAPLIGVNRALVVQGLKVMARRQRPGLVALSDVGRLDRAPTSYHLGFVLGPRVNAGGRIGAADLGARCLSTDDMA
EAVKLAAQLDTLNTDRREIEQRVREAALVQAEARGLEAPLVWAAEDGWHPGVVGIVASRLKDHTRRPAIVIGFDGDDGKG
SGRSMAGVDLGASIQKLAAEGLIQKGGGHKMAAGLSLSRAQLEPAMERLTELLAKQGAGTGGPADLRLDGTIMTSAATPE
LIEKIEAAGPYGAGAPAPRFALPALRIRHTRPVGETHLKLTLGDGGPVTIDAICFDAVRSGLDELQAHNGRSVHVAGRVE
LNHWQGRTRVQLRLDDAAWADE
>Mature_581_residues
SVSFLGVEASLTGRRWIGPSDDVERLAQTLIQRADLDPAVAAILARRGVQPDDVASFLAPALRDLLPDPMSLKDMAPAAT
RLVEAARKGKRIAIFADYDVDGGSSAALLIWWLRALGRQATLYIPDRIDEGYGPNDEAMAALARGHDLIICVDCGTLSHG
PIAAAKGADVMVLDHHLATAELPECVAVVNPNRQDEDGASGHLCAAGVVFLVLVDANRRMREAGEQGPDLMGLLDLVALA
TVADVAPLIGVNRALVVQGLKVMARRQRPGLVALSDVGRLDRAPTSYHLGFVLGPRVNAGGRIGAADLGARCLSTDDMAE
AVKLAAQLDTLNTDRREIEQRVREAALVQAEARGLEAPLVWAAEDGWHPGVVGIVASRLKDHTRRPAIVIGFDGDDGKGS
GRSMAGVDLGASIQKLAAEGLIQKGGGHKMAAGLSLSRAQLEPAMERLTELLAKQGAGTGGPADLRLDGTIMTSAATPEL
IEKIEAAGPYGAGAPAPRFALPALRIRHTRPVGETHLKLTLGDGGPVTIDAICFDAVRSGLDELQAHNGRSVHVAGRVEL
NHWQGRTRVQLRLDDAAWADE

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=564, Percent_Identity=36.1702127659575, Blast_Score=268, Evalue=5e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 61396; Mature: 61265

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSFLGVEASLTGRRWIGPSDDVERLAQTLIQRADLDPAVAAILARRGVQPDDVASFLA
CCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
PALRDLLPDPMSLKDMAPAATRLVEAARKGKRIAIFADYDVDGGSSAALLIWWLRALGRQ
HHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCC
ATLYIPDRIDEGYGPNDEAMAALARGHDLIICVDCGTLSHGPIAAAKGADVMVLDHHLAT
EEEEECCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCCEEEEEECCCCH
AELPECVAVVNPNRQDEDGASGHLCAAGVVFLVLVDANRRMREAGEQGPDLMGLLDLVAL
HCCCCEEEEECCCCCCCCCCCCCHHHHHEEEEEEECCCHHHHHHCCCCCHHHHHHHHHHH
ATVADVAPLIGVNRALVVQGLKVMARRQRPGLVALSDVGRLDRAPTSYHLGFVLGPRVNA
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCC
GGRIGAADLGARCLSTDDMAEAVKLAAQLDTLNTDRREIEQRVREAALVQAEARGLEAPL
CCCCCHHHHCCHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
VWAAEDGWHPGVVGIVASRLKDHTRRPAIVIGFDGDDGKGSGRSMAGVDLGASIQKLAAE
EEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHH
GLIQKGGGHKMAAGLSLSRAQLEPAMERLTELLAKQGAGTGGPADLRLDGTIMTSAATPE
HHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEEECCCCHH
LIEKIEAAGPYGAGAPAPRFALPALRIRHTRPVGETHLKLTLGDGGPVTIDAICFDAVRS
HHHHHHHCCCCCCCCCCCCHHCCHHHEECCCCCCCEEEEEEECCCCCEEHHHHHHHHHHH
GLDELQAHNGRSVHVAGRVELNHWQGRTRVQLRLDDAAWADE
HHHHHHHCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure 
SVSFLGVEASLTGRRWIGPSDDVERLAQTLIQRADLDPAVAAILARRGVQPDDVASFLA
CEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
PALRDLLPDPMSLKDMAPAATRLVEAARKGKRIAIFADYDVDGGSSAALLIWWLRALGRQ
HHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCC
ATLYIPDRIDEGYGPNDEAMAALARGHDLIICVDCGTLSHGPIAAAKGADVMVLDHHLAT
EEEEECCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCCEEEEEECCCCH
AELPECVAVVNPNRQDEDGASGHLCAAGVVFLVLVDANRRMREAGEQGPDLMGLLDLVAL
HCCCCEEEEECCCCCCCCCCCCCHHHHHEEEEEEECCCHHHHHHCCCCCHHHHHHHHHHH
ATVADVAPLIGVNRALVVQGLKVMARRQRPGLVALSDVGRLDRAPTSYHLGFVLGPRVNA
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCC
GGRIGAADLGARCLSTDDMAEAVKLAAQLDTLNTDRREIEQRVREAALVQAEARGLEAPL
CCCCCHHHHCCHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
VWAAEDGWHPGVVGIVASRLKDHTRRPAIVIGFDGDDGKGSGRSMAGVDLGASIQKLAAE
EEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHH
GLIQKGGGHKMAAGLSLSRAQLEPAMERLTELLAKQGAGTGGPADLRLDGTIMTSAATPE
HHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEEECCCCHH
LIEKIEAAGPYGAGAPAPRFALPALRIRHTRPVGETHLKLTLGDGGPVTIDAICFDAVRS
HHHHHHHCCCCCCCCCCCCHHCCHHHEECCCCCCCEEEEEEECCCCCEEHHHHHHHHHHH
GLDELQAHNGRSVHVAGRVELNHWQGRTRVQLRLDDAAWADE
HHHHHHHCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]