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The map label for this gene is yecD [C]

Identifier: 89055492

GI number: 89055492

Start: 3021329

End: 3021886

Strand: Direct

Name: yecD [C]

Synonym: Jann_3001

Alternate gene names: 89055492

Gene position: 3021329-3021886 (Clockwise)

Preceding gene: 89055491

Following gene: 89055493

Centisome position: 69.97

GC content: 63.98

Gene sequence:

>558_bases
ATGACCTCCGCCCTGATCCTGATCGACATCCAACAGGGGTTTGACAGCCCCGTCTGGGGTGCCCGCAACAACCCGGACGC
AGAGGCCAACGCGGCGCGCCTTCTTGCTGCGTGGCGCAAGGCCTCCGCGCCGATCTGCCATATCCGCCACATTAGCGTGG
AGCCCGGCAGCCCGCTTGTGGGTGATGGCGCGCAGTTCAAGGCAGAGGTCGCGCCGCTCGCCGGCGAGCCGGTGTTTGAG
AAATCTGTGAACTCGGCCTTCATCAGCACCGATCTGGAACATCAACTGACCCATTCCTCCATCGCCGACGTGGTGATTTG
CGGGCTGACGACGCCCCATTGCGTGTCCACCACCACGCGCATGGCGGCGAATCTGGGTTTCGGCGTGCGGCTGGTCCATG
ACGCTTGCGCGGCGTTCGCGGGCAATTCTGATACCGGGTGGGCGGACGGCATGGCCCCGCTCAGCCCCCAGGTCATCCAC
AACACTGCCATCAGCCATCTGCACAATGAGTTCGCCAATGCGCTGTCCACCCAAGCCATTCTGACTGAGGGACCCTGA

Upstream 100 bases:

>100_bases
ACTCGACCCCAGATCCGGTGCCCACTTTTTTGGAGCGTGCGTTCATAATGCCGTGCAATTTATGCCAAAAACCGGTTCCC
ACTGTTCGGAGCGCGACCTG

Downstream 100 bases:

>100_bases
TCGTGTCCGTAAGCTTTCTTGGCGTCGAGGCATCGCTGACCGGCCGCCGCTGGATCGGCCCCTCCGACGATGTGGAACGC
CTGGCCCAGACACTGATACA

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MTSALILIDIQQGFDSPVWGARNNPDAEANAARLLAAWRKASAPICHIRHISVEPGSPLVGDGAQFKAEVAPLAGEPVFE
KSVNSAFISTDLEHQLTHSSIADVVICGLTTPHCVSTTTRMAANLGFGVRLVHDACAAFAGNSDTGWADGMAPLSPQVIH
NTAISHLHNEFANALSTQAILTEGP

Sequences:

>Translated_185_residues
MTSALILIDIQQGFDSPVWGARNNPDAEANAARLLAAWRKASAPICHIRHISVEPGSPLVGDGAQFKAEVAPLAGEPVFE
KSVNSAFISTDLEHQLTHSSIADVVICGLTTPHCVSTTTRMAANLGFGVRLVHDACAAFAGNSDTGWADGMAPLSPQVIH
NTAISHLHNEFANALSTQAILTEGP
>Mature_184_residues
TSALILIDIQQGFDSPVWGARNNPDAEANAARLLAAWRKASAPICHIRHISVEPGSPLVGDGAQFKAEVAPLAGEPVFEK
SVNSAFISTDLEHQLTHSSIADVVICGLTTPHCVSTTTRMAANLGFGVRLVHDACAAFAGNSDTGWADGMAPLSPQVIHN
TAISHLHNEFANALSTQAILTEGP

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=195, Percent_Identity=28.7179487179487, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 19398; Mature: 19267

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSALILIDIQQGFDSPVWGARNNPDAEANAARLLAAWRKASAPICHIRHISVEPGSPLV
CCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC
GDGAQFKAEVAPLAGEPVFEKSVNSAFISTDLEHQLTHSSIADVVICGLTTPHCVSTTTR
CCCCCCEEEECCCCCCCHHHHHCCCHHHHCCHHHHHHHHHHHHEEEECCCCCHHHHHHHH
MAANLGFGVRLVHDACAAFAGNSDTGWADGMAPLSPQVIHNTAISHLHNEFANALSTQAI
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
LTEGP
EECCC
>Mature Secondary Structure 
TSALILIDIQQGFDSPVWGARNNPDAEANAARLLAAWRKASAPICHIRHISVEPGSPLV
CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC
GDGAQFKAEVAPLAGEPVFEKSVNSAFISTDLEHQLTHSSIADVVICGLTTPHCVSTTTR
CCCCCCEEEECCCCCCCHHHHHCCCHHHHCCHHHHHHHHHHHHEEEECCCCCHHHHHHHH
MAANLGFGVRLVHDACAAFAGNSDTGWADGMAPLSPQVIHNTAISHLHNEFANALSTQAI
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
LTEGP
EECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA