Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055446

Identifier: 89055446

GI number: 89055446

Start: 2976908

End: 2977297

Strand: Direct

Name: 89055446

Synonym: Jann_2955

Alternate gene names: NA

Gene position: 2976908-2977297 (Clockwise)

Preceding gene: 89055444

Following gene: 89055449

Centisome position: 68.94

GC content: 57.95

Gene sequence:

>390_bases
ATGACACAAATTGCACCCTTTGACGGACCCCACTGGACGCCTGAGCTGATTGATGAACTGGAGGAGGGTCGCAAAAGCGG
CGCTGTCGGCTCCACACTGGTCAGCAAAAGCGACCGCGCGAATGTCTGGTTGATCGAGATGCAGCCGGGTGATCGCCTGC
CCTTCCACACCCATGTGCTGGATTACTTCTGGGTCGCCACCACGCCGGGCCGCGCGCGGTCCCGCTATGCCGATGGGACA
GTGGCTGAGGTGGATTACGAGGTCGGAACCACCAGGCATTTCACCTTCAAGGACGGCGAAAGCATGACCCATGACCTTGA
AAACATTGGCGATACAGTCTTGTGCTTCACTACGGTCGAATACCTCGACAGCGCAAATCAGCCCCTATAG

Upstream 100 bases:

>100_bases
ATTACTGCCGCCGTGCCTGCCATGTGACGCTCTCCTGATCCCTCTTCCCATCCTTATTTATCACTCTATAATTAAAAGGC
GAGAGAGGAGGCGCATTCAG

Downstream 100 bases:

>100_bases
GCGGACCGTCCCACCCGTCGCAGCCGAGGTCGCGATGGCTTCCAGAACCTCTATATTGTGAATCATCTGATGCGGTGTGA
ACGGGTACGGGGCGGTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MTQIAPFDGPHWTPELIDELEEGRKSGAVGSTLVSKSDRANVWLIEMQPGDRLPFHTHVLDYFWVATTPGRARSRYADGT
VAEVDYEVGTTRHFTFKDGESMTHDLENIGDTVLCFTTVEYLDSANQPL

Sequences:

>Translated_129_residues
MTQIAPFDGPHWTPELIDELEEGRKSGAVGSTLVSKSDRANVWLIEMQPGDRLPFHTHVLDYFWVATTPGRARSRYADGT
VAEVDYEVGTTRHFTFKDGESMTHDLENIGDTVLCFTTVEYLDSANQPL
>Mature_128_residues
TQIAPFDGPHWTPELIDELEEGRKSGAVGSTLVSKSDRANVWLIEMQPGDRLPFHTHVLDYFWVATTPGRARSRYADGTV
AEVDYEVGTTRHFTFKDGESMTHDLENIGDTVLCFTTVEYLDSANQPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14476; Mature: 14345

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQIAPFDGPHWTPELIDELEEGRKSGAVGSTLVSKSDRANVWLIEMQPGDRLPFHTHVL
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHHH
DYFWVATTPGRARSRYADGTVAEVDYEVGTTRHFTFKDGESMTHDLENIGDTVLCFTTVE
HEEEEECCCCCCHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCEEEEHHHHH
YLDSANQPL
HHHCCCCCC
>Mature Secondary Structure 
TQIAPFDGPHWTPELIDELEEGRKSGAVGSTLVSKSDRANVWLIEMQPGDRLPFHTHVL
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHHH
DYFWVATTPGRARSRYADGTVAEVDYEVGTTRHFTFKDGESMTHDLENIGDTVLCFTTVE
HEEEEECCCCCCHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCEEEEHHHHH
YLDSANQPL
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA