Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055449

Identifier: 89055449

GI number: 89055449

Start: 2978921

End: 2979481

Strand: Direct

Name: 89055449

Synonym: Jann_2958

Alternate gene names: NA

Gene position: 2978921-2979481 (Clockwise)

Preceding gene: 89055446

Following gene: 89055450

Centisome position: 68.99

GC content: 63.99

Gene sequence:

>561_bases
ATGTCATCGCCCATTCTCCAGCCCCTGCCTCCTGATGCGTGGCCAGAGGCGCTTGCCGATCTGGAAGACGCCTTCGCCGG
TCGTCTGAATGTGTACCGGACGATGGCCCATCACCCTGCGCTGATGCGCGCCTGGGCCGATCTGCGCCAGCACGTGGTGC
TCGACACCAGTCTGGGTCGCGCAAGGTCGGAGGTGGTGATTTTGCGGGCGGCGGTGCGGATGGGATCGGATTACGAATGG
GCCCATCACGTGTCTCGCGCCCACGCGCTGGGGTTCACCGATGCGCGCATTGCAACCCTGCGCGGCCCGTTGGAAGAGAT
GACAGCAGAGGACTTGATCCTGGCGCGGGCGGTGGATGAGGTGGCCGATGCCGCGCGCCTCTCCCCCGAGACATTGCAGG
ACCTGACAGCGCTTGTTGGGCCGCAGGGCATTCTTGATCTCTTTGCGACCGTTGGATTTTACACGACGCTGGCCTTCATC
GTGAACACCTTTGACACCCCAATCGACAGTGCCGTCGCGCAGGAACTGTCCGCCGCACCCCTCACGGATCGCACGCCATG
A

Upstream 100 bases:

>100_bases
CATGATTTTTGACAGTAATAATGTTGATGACATTTCTCCTCTTGCGCCTGTCCCAGAGCCCGTGCCACCCCAAAAGGACG
CCTTGTAAAGGACGCCTGCC

Downstream 100 bases:

>100_bases
CCGCCCCACACAGCCGATTGGAGCATGTGCCGATCAGTATGTTCACCCTGCCGATGGGGGTCTTCGGCCTGTCGCTGGCG
CTGGATGCGGGCGGTTTGGC

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MSSPILQPLPPDAWPEALADLEDAFAGRLNVYRTMAHHPALMRAWADLRQHVVLDTSLGRARSEVVILRAAVRMGSDYEW
AHHVSRAHALGFTDARIATLRGPLEEMTAEDLILARAVDEVADAARLSPETLQDLTALVGPQGILDLFATVGFYTTLAFI
VNTFDTPIDSAVAQELSAAPLTDRTP

Sequences:

>Translated_186_residues
MSSPILQPLPPDAWPEALADLEDAFAGRLNVYRTMAHHPALMRAWADLRQHVVLDTSLGRARSEVVILRAAVRMGSDYEW
AHHVSRAHALGFTDARIATLRGPLEEMTAEDLILARAVDEVADAARLSPETLQDLTALVGPQGILDLFATVGFYTTLAFI
VNTFDTPIDSAVAQELSAAPLTDRTP
>Mature_185_residues
SSPILQPLPPDAWPEALADLEDAFAGRLNVYRTMAHHPALMRAWADLRQHVVLDTSLGRARSEVVILRAAVRMGSDYEWA
HHVSRAHALGFTDARIATLRGPLEEMTAEDLILARAVDEVADAARLSPETLQDLTALVGPQGILDLFATVGFYTTLAFIV
NTFDTPIDSAVAQELSAAPLTDRTP

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20251; Mature: 20120

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPILQPLPPDAWPEALADLEDAFAGRLNVYRTMAHHPALMRAWADLRQHVVLDTSLGR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCH
ARSEVVILRAAVRMGSDYEWAHHVSRAHALGFTDARIATLRGPLEEMTAEDLILARAVDE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
VADAARLSPETLQDLTALVGPQGILDLFATVGFYTTLAFIVNTFDTPIDSAVAQELSAAP
HHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
LTDRTP
CCCCCC
>Mature Secondary Structure 
SSPILQPLPPDAWPEALADLEDAFAGRLNVYRTMAHHPALMRAWADLRQHVVLDTSLGR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCH
ARSEVVILRAAVRMGSDYEWAHHVSRAHALGFTDARIATLRGPLEEMTAEDLILARAVDE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
VADAARLSPETLQDLTALVGPQGILDLFATVGFYTTLAFIVNTFDTPIDSAVAQELSAAP
HHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
LTDRTP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA