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The map label for this gene is ycjN [C]

Identifier: 89055393

GI number: 89055393

Start: 2921837

End: 2923156

Strand: Direct

Name: ycjN [C]

Synonym: Jann_2902

Alternate gene names: 89055393

Gene position: 2921837-2923156 (Clockwise)

Preceding gene: 89055392

Following gene: 89055394

Centisome position: 67.67

GC content: 61.59

Gene sequence:

>1320_bases
ATGTCTCTCAAGAGAGCACTGAGCGCGACAACAGCGCTTGCAATCTGCGCCGCGGGAACCGCCGCATTCGCAGACGGCCA
CTCGGCCACCATCACCATCGCGACTGTGAACAACGGCGACATGGTGCGTATGCAGGGCTACACGGACCAGTTCACCGAAG
AGACCGGCATCGCCGTCGAGTGGGTGACACTGGAAGAGAACGTGCTGCGCCAGCGCGTGACCACGGACATCACCACCAAC
GGTGGCCAGTTCGATATCATGACAATCGGCATGTACGAGACCCCGATCTGGGGCTCCAACGGCTGGCTGGTTCCGTTGGA
CGGCCTGTCCGACGACTACAACGTCGGTGACATCCTGCCTGCAATGGCAGGCGGCCTGTCCCACGACGGCACACTCTACG
CGGCTCCGTTTTACGGCGAATCCTCGATGGTGATGTATCGCACGGACCTGATGGAGGCCGCTGGCCTTGAAATGCCGGAA
GCGCCGACATGGGAGTTCATCCGCGAAGCCGCAGCGGCCATGACCGACCGCGACAACGACATCAACGGGATCTGCCTGCG
CGGCAAGCCCGGTTGGGGTGAGGGCGGTGCCTTCATTACAGCAATGTCCAACTCCTTCGGTGCCCGCTGGTTCGACATGG
AATGGCAGGCGCAGTTCGACACCCAGCCATGGCTCGACACGCTGACATTCTATCAGGGGATGATGCAGGAATCCGGCCCC
GCCGGTTATGCAACAAACGGCTTCACCGAGAACCTGAACCTGTTCAACCAGGGCCTCTGCGGCATGTGGATCGACGCCAC
GGTTGCGGCATCCTTCGTGACGAACCCCGATGACAGCACCGTTGCGGACAGTGTGGGCTTTGCGCTGGCACCCGACAACG
GCTTGGGCGTCCGCTCCAACTGGCTTTGGGCCTGGGCACTGGCGATCCCCGCCGGGACGCAGCAGCAGGACGAGGCGCTT
CAGTTCATTGAGTGGGCAACATCCACGGACTATATCGAACTGGTTGCCGAGAATGAGGGTTGGGCCAATGTCCCCCCCGG
TGCACGGACCTCTCTCTATGAGAACCCGAACTACATCGACGTGCCGTTCGCGCAGATGACGCTGGACTCGATCCTGTCAG
CTGACCCGAACAACTCCACGGTCGAAGAGAGCCCTTATGTGGGGATCCAGTTCGCGGCCATCCCGGAGTTTGCCGGTATC
GCGACCGAAGTGAGCCAGGAATTCTCGGCCTTCTACGCCGGTCAGCAGACCGCGGAAGAGGCGCTGGCGAATGCTCAGGC
GATCACTAACGAGGCCATGGAAGCCGCTGGTTACCAGTAA

Upstream 100 bases:

>100_bases
CCTTTCGCCTGAAATTTACGCGCGTAAAGTTTTTCGTTGACCGAACGTGCTGTTAACCGCAATGTGATTGGACAACATCC
AATGATCAGGGAGGATTCGG

Downstream 100 bases:

>100_bases
GCGTCCGGCTTGAGAAACTGGAAGGCGGCGCGTGTAGCCGCCTTCCACCCCCTCTGCTAAACTTTCCGATCATTCCCCAA
TCTGGTTCCCCGGGCCTGTC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MSLKRALSATTALAICAAGTAAFADGHSATITIATVNNGDMVRMQGYTDQFTEETGIAVEWVTLEENVLRQRVTTDITTN
GGQFDIMTIGMYETPIWGSNGWLVPLDGLSDDYNVGDILPAMAGGLSHDGTLYAAPFYGESSMVMYRTDLMEAAGLEMPE
APTWEFIREAAAAMTDRDNDINGICLRGKPGWGEGGAFITAMSNSFGARWFDMEWQAQFDTQPWLDTLTFYQGMMQESGP
AGYATNGFTENLNLFNQGLCGMWIDATVAASFVTNPDDSTVADSVGFALAPDNGLGVRSNWLWAWALAIPAGTQQQDEAL
QFIEWATSTDYIELVAENEGWANVPPGARTSLYENPNYIDVPFAQMTLDSILSADPNNSTVEESPYVGIQFAAIPEFAGI
ATEVSQEFSAFYAGQQTAEEALANAQAITNEAMEAAGYQ

Sequences:

>Translated_439_residues
MSLKRALSATTALAICAAGTAAFADGHSATITIATVNNGDMVRMQGYTDQFTEETGIAVEWVTLEENVLRQRVTTDITTN
GGQFDIMTIGMYETPIWGSNGWLVPLDGLSDDYNVGDILPAMAGGLSHDGTLYAAPFYGESSMVMYRTDLMEAAGLEMPE
APTWEFIREAAAAMTDRDNDINGICLRGKPGWGEGGAFITAMSNSFGARWFDMEWQAQFDTQPWLDTLTFYQGMMQESGP
AGYATNGFTENLNLFNQGLCGMWIDATVAASFVTNPDDSTVADSVGFALAPDNGLGVRSNWLWAWALAIPAGTQQQDEAL
QFIEWATSTDYIELVAENEGWANVPPGARTSLYENPNYIDVPFAQMTLDSILSADPNNSTVEESPYVGIQFAAIPEFAGI
ATEVSQEFSAFYAGQQTAEEALANAQAITNEAMEAAGYQ
>Mature_438_residues
SLKRALSATTALAICAAGTAAFADGHSATITIATVNNGDMVRMQGYTDQFTEETGIAVEWVTLEENVLRQRVTTDITTNG
GQFDIMTIGMYETPIWGSNGWLVPLDGLSDDYNVGDILPAMAGGLSHDGTLYAAPFYGESSMVMYRTDLMEAAGLEMPEA
PTWEFIREAAAAMTDRDNDINGICLRGKPGWGEGGAFITAMSNSFGARWFDMEWQAQFDTQPWLDTLTFYQGMMQESGPA
GYATNGFTENLNLFNQGLCGMWIDATVAASFVTNPDDSTVADSVGFALAPDNGLGVRSNWLWAWALAIPAGTQQQDEALQ
FIEWATSTDYIELVAENEGWANVPPGARTSLYENPNYIDVPFAQMTLDSILSADPNNSTVEESPYVGIQFAAIPEFAGIA
TEVSQEFSAFYAGQQTAEEALANAQAITNEAMEAAGYQ

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47416; Mature: 47285

Theoretical pI: Translated: 3.56; Mature: 3.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKRALSATTALAICAAGTAAFADGHSATITIATVNNGDMVRMQGYTDQFTEETGIAVE
CCHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEEEECCCCEEEECCCCHHHCCCCCCEEE
WVTLEENVLRQRVTTDITTNGGQFDIMTIGMYETPIWGSNGWLVPLDGLSDDYNVGDILP
EEECCHHHHHHHHHHEEECCCCEEEEEEEEEEECCEECCCCCEEECCCCCCCCCHHHHHH
AMAGGLSHDGTLYAAPFYGESSMVMYRTDLMEAAGLEMPEAPTWEFIREAAAAMTDRDND
HHHCCCCCCCEEEEEEEECCCCEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC
INGICLRGKPGWGEGGAFITAMSNSFGARWFDMEWQAQFDTQPWLDTLTFYQGMMQESGP
CCEEEEECCCCCCCCCEEEEEECCCCCCEEEECEEEECCCCCHHHHHHHHHHHHHHHCCC
AGYATNGFTENLNLFNQGLCGMWIDATVAASFVTNPDDSTVADSVGFALAPDNGLGVRSN
CCCCCCCCCCCHHHHHCCCCCEEHHHHHHHHEECCCCCCHHHHCCCEEECCCCCCCCCCC
WLWAWALAIPAGTQQQDEALQFIEWATSTDYIELVAENEGWANVPPGARTSLYENPNYID
CEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEE
VPFAQMTLDSILSADPNNSTVEESPYVGIQFAAIPEFAGIATEVSQEFSAFYAGQQTAEE
CCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHH
ALANAQAITNEAMEAAGYQ
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLKRALSATTALAICAAGTAAFADGHSATITIATVNNGDMVRMQGYTDQFTEETGIAVE
CHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEEEECCCCEEEECCCCHHHCCCCCCEEE
WVTLEENVLRQRVTTDITTNGGQFDIMTIGMYETPIWGSNGWLVPLDGLSDDYNVGDILP
EEECCHHHHHHHHHHEEECCCCEEEEEEEEEEECCEECCCCCEEECCCCCCCCCHHHHHH
AMAGGLSHDGTLYAAPFYGESSMVMYRTDLMEAAGLEMPEAPTWEFIREAAAAMTDRDND
HHHCCCCCCCEEEEEEEECCCCEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC
INGICLRGKPGWGEGGAFITAMSNSFGARWFDMEWQAQFDTQPWLDTLTFYQGMMQESGP
CCEEEEECCCCCCCCCEEEEEECCCCCCEEEECEEEECCCCCHHHHHHHHHHHHHHHCCC
AGYATNGFTENLNLFNQGLCGMWIDATVAASFVTNPDDSTVADSVGFALAPDNGLGVRSN
CCCCCCCCCCCHHHHHCCCCCEEHHHHHHHHEECCCCCCHHHHCCCEEECCCCCCCCCCC
WLWAWALAIPAGTQQQDEALQFIEWATSTDYIELVAENEGWANVPPGARTSLYENPNYID
CEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEE
VPFAQMTLDSILSADPNNSTVEESPYVGIQFAAIPEFAGIATEVSQEFSAFYAGQQTAEE
CCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHH
ALANAQAITNEAMEAAGYQ
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA