| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is purR [H]
Identifier: 89055392
GI number: 89055392
Start: 2920685
End: 2921716
Strand: Direct
Name: purR [H]
Synonym: Jann_2901
Alternate gene names: 89055392
Gene position: 2920685-2921716 (Clockwise)
Preceding gene: 89055388
Following gene: 89055393
Centisome position: 67.64
GC content: 60.37
Gene sequence:
>1032_bases ATGGCCGACCAACAGATCAGGAATATGGAAGACTTTGCCGCCGTCAGCGGGATTTCACGCCCGACGGTCTCAAAGTACTT CAACGACCCCCAAAGTGTCCGCGCCACGACACGCGCGCGGATCGAACAGGCCCTCGACCGGTATGATTATCGCCCCAACA TCTATGCAGTGAACCAGAACCGGCGGTTGACCAAGAACGTCGGCATCATGGTCCCCTATCTTGCGGACCCGTTCTTTGCC GAAATCGCCCGCAACATCGAGATGATGGTGATCGAGGCTGGGTTTCGCCCGATCCTGCTCAGCTCCCACGGCAGCCCGGA GCAGGAAGCCGAGAACATGGAGAGTTTGCGGGTCCTGAAACCCGCAGGCGTGTTGATGGCCCCCCTGGGCCGTGCGTCCG ACCGGAGCGCGGTTGAGAAGTTCTGCCGCGATGTGCCCACGATCCTGTTTGACAGCAACCTGGACGGCATGGGCGAGGCG TTCATCGGCTCCGACAACGTGAGTTTTGTCGAACAAACAGTGGCTTACATCAGTCAATCTGGCAGCCCGCCATGTTTTTT CGAGATGAAGAACCCCGCCAACCCCAATGCCAACAAGCGCCGAAATGCCTACATCGCGGCCATGGAGACCCGGGGGCTGG AGCCGCGTGTCATCAGCATCGATGGCGACGGATGGGCGTTTGAGGAGATTGGACGCATCGGGGCGCATGATGTGTTGCAG GCCGGGCAATTGCCCACCAACACGGTGATCTGTAGCAACGACCGCCTGGCCATCGGCTTTCTGGCGGCCTGTTACGAGCG TGGCCTACGGGTGGGCAGCGGACCAGACTGCGCGTTGCGCGTCGCCTCCCACGATGATCACCCGTTTTCGCGCTTCACTT GCCCGGCGCTCACCACCGCCGCCCATGACTACGATTCGGTGTCCAAAAGCAGTGTCGACACCCTCTTTCAACTGATCGAA AACGGCGCGCGCCTGCCGCAACGGCATGAAACCCTGTTCCCTGCCAAACTAATCATTCGCGCATCCGCTTGA
Upstream 100 bases:
>100_bases CGCCCGTTGGGCTCAATCTTTACGCGCGAAAAGATTTTTCTTCTCAAATCGTGGGTCAGCGGATAGCGTCGCGGTGGTGA AACGGAGGCGTTCTGGTCCT
Downstream 100 bases:
>100_bases TTTTTCAGCGAAATGAAAACCCTTTCGCCTGAAATTTACGCGCGTAAAGTTTTTCGTTGACCGAACGTGCTGTTAACCGC AATGTGATTGGACAACATCC
Product: LacI family transcription regulator
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MADQQIRNMEDFAAVSGISRPTVSKYFNDPQSVRATTRARIEQALDRYDYRPNIYAVNQNRRLTKNVGIMVPYLADPFFA EIARNIEMMVIEAGFRPILLSSHGSPEQEAENMESLRVLKPAGVLMAPLGRASDRSAVEKFCRDVPTILFDSNLDGMGEA FIGSDNVSFVEQTVAYISQSGSPPCFFEMKNPANPNANKRRNAYIAAMETRGLEPRVISIDGDGWAFEEIGRIGAHDVLQ AGQLPTNTVICSNDRLAIGFLAACYERGLRVGSGPDCALRVASHDDHPFSRFTCPALTTAAHDYDSVSKSSVDTLFQLIE NGARLPQRHETLFPAKLIIRASA
Sequences:
>Translated_343_residues MADQQIRNMEDFAAVSGISRPTVSKYFNDPQSVRATTRARIEQALDRYDYRPNIYAVNQNRRLTKNVGIMVPYLADPFFA EIARNIEMMVIEAGFRPILLSSHGSPEQEAENMESLRVLKPAGVLMAPLGRASDRSAVEKFCRDVPTILFDSNLDGMGEA FIGSDNVSFVEQTVAYISQSGSPPCFFEMKNPANPNANKRRNAYIAAMETRGLEPRVISIDGDGWAFEEIGRIGAHDVLQ AGQLPTNTVICSNDRLAIGFLAACYERGLRVGSGPDCALRVASHDDHPFSRFTCPALTTAAHDYDSVSKSSVDTLFQLIE NGARLPQRHETLFPAKLIIRASA >Mature_342_residues ADQQIRNMEDFAAVSGISRPTVSKYFNDPQSVRATTRARIEQALDRYDYRPNIYAVNQNRRLTKNVGIMVPYLADPFFAE IARNIEMMVIEAGFRPILLSSHGSPEQEAENMESLRVLKPAGVLMAPLGRASDRSAVEKFCRDVPTILFDSNLDGMGEAF IGSDNVSFVEQTVAYISQSGSPPCFFEMKNPANPNANKRRNAYIAAMETRGLEPRVISIDGDGWAFEEIGRIGAHDVLQA GQLPTNTVICSNDRLAIGFLAACYERGLRVGSGPDCALRVASHDDHPFSRFTCPALTTAAHDYDSVSKSSVDTLFQLIEN GARLPQRHETLFPAKLIIRASA
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790194, Length=341, Percent_Identity=26.6862170087977, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1790369, Length=343, Percent_Identity=25.6559766763848, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1789068, Length=339, Percent_Identity=23.598820058997, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1788474, Length=318, Percent_Identity=21.6981132075472, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786540, Length=340, Percent_Identity=26.1764705882353, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI48994940, Length=300, Percent_Identity=24.6666666666667, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1787948, Length=337, Percent_Identity=24.6290801186944, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789202, Length=295, Percent_Identity=23.728813559322, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1790715, Length=317, Percent_Identity=22.397476340694, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790689, Length=334, Percent_Identity=23.6526946107784, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 37823; Mature: 37692
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQQIRNMEDFAAVSGISRPTVSKYFNDPQSVRATTRARIEQALDRYDYRPNIYAVNQN CCCHHHHCHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC RRLTKNVGIMVPYLADPFFAEIARNIEMMVIEAGFRPILLSSHGSPEQEAENMESLRVLK CEEECCCCEEEHHHCCHHHHHHHCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCC PAGVLMAPLGRASDRSAVEKFCRDVPTILFDSNLDGMGEAFIGSDNVSFVEQTVAYISQS CCCHHCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCEECCCCHHHHHHHHHHHHCC GSPPCFFEMKNPANPNANKRRNAYIAAMETRGLEPRVISIDGDGWAFEEIGRIGAHDVLQ CCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHCCCHHHHHH AGQLPTNTVICSNDRLAIGFLAACYERGLRVGSGPDCALRVASHDDHPFSRFTCPALTTA CCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCEECCHHHHH AHDYDSVSKSSVDTLFQLIENGARLPQRHETLFPAKLIIRASA HCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEEECC >Mature Secondary Structure ADQQIRNMEDFAAVSGISRPTVSKYFNDPQSVRATTRARIEQALDRYDYRPNIYAVNQN CCHHHHCHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC RRLTKNVGIMVPYLADPFFAEIARNIEMMVIEAGFRPILLSSHGSPEQEAENMESLRVLK CEEECCCCEEEHHHCCHHHHHHHCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCC PAGVLMAPLGRASDRSAVEKFCRDVPTILFDSNLDGMGEAFIGSDNVSFVEQTVAYISQS CCCHHCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCEECCCCHHHHHHHHHHHHCC GSPPCFFEMKNPANPNANKRRNAYIAAMETRGLEPRVISIDGDGWAFEEIGRIGAHDVLQ CCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHCCCHHHHHH AGQLPTNTVICSNDRLAIGFLAACYERGLRVGSGPDCALRVASHDDHPFSRFTCPALTTA CCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCEECCHHHHH AHDYDSVSKSSVDTLFQLIENGARLPQRHETLFPAKLIIRASA HCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA