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The map label for this gene is dadA [H]

Identifier: 89055371

GI number: 89055371

Start: 2901082

End: 2902320

Strand: Direct

Name: dadA [H]

Synonym: Jann_2880

Alternate gene names: 89055371

Gene position: 2901082-2902320 (Clockwise)

Preceding gene: 89055370

Following gene: 89055379

Centisome position: 67.19

GC content: 66.51

Gene sequence:

>1239_bases
ATGAACGACGACACCACGAGTGTTCTGGGCGCGGGCATCGTGGGCCTGTGTTGCGCGCTGTCCTTGGCCGAGCGGGGGCA
CAAGGTGCGCGTGATTGACCGTGATGCGCCGGGGCGGGCGACGTCTTATGGCAATGCGGGCGTCATATCGCCGTGGTCGA
TTGTGCCGCAATCCATGCCCGGCCTGTGGCGCAAGATCCCCGGTCTGTTGATGGACCCCGGCAAACCCCTGCGCGTGCGC
GCGTCCCATTGGCCCCGAATGGTCGGCTGGGGCCTGCGATTTCTGGCCAATGGGCGGGAGGATCGAGTGCGGCAGGTGTC
TGACGCGATGGAGCATCTGTGCGGTCCGTCCGTGGATCTGTACCGCCGCCACCTGTCCGGCACCGGGCACGAACATCTGG
TGAAGGACGCCTGCTACATCCACGCCTTTCGCAATGCGGGACAGGCGGATTTATCAGGCCTGGACTACAGCCTGCGGGCG
GAGAAGGGCGCGGATATGGCGGTGTTGGGCGCTGACGATCTGCGCGCGTTGGAGCCTGCGTTGAGCCCCGAGTTCAAGGC
CGCCGTCCTGATCAAGGGACAGGCCCGCGCGGACTCGCCCGGTGCGATTTGCGCGGCGATTGCCGAGAAGGCGCGCGCGA
TGGGGGTCACATTTGTGCACGACGATGTGGTGGGGGTTGCGCGGGATGGGGACGGCTGGCGGATCGACTGCGCCAGCGGG
CCAAGGCACAGCGACACGCTGGTCGTGGCGATGGGCGTGTGGTCTGCCGCAATGCTGAAGGGCATGGGCTTGCGCCTGCC
CTTGCAGGCCGAGCGCGGCTATCACGTGGAGTTTGAGGGTCCCGGCGTGGCGCTGACCCATTCGGTCATGGATGTGGATC
GCAAGGTGGTGCTGAGCAGTATGGAGGGGCGTATTCGCATCGCGGGTCAAGCAGAGTTTGCGGCCATCGACGCGCCACCG
GACCCCACGCGCAAGGCGGTCCTGACACGGCAGGCCAGCGCCGCCCTGCCCGGCCTGAATGCGCGCGAAGCGGAGGTCTG
GATGGGCCACCGGCCCTCCTTCCCCGACAGTCTTCCGGCGATCGGAGAGGTGCAAGGGCAAGAGGGGCTGTTCGCCTGTT
TCGGCCATTCGCACTACGGATTGATGATGGCGCCAAAATCCGGGGAAATCGTGGCGGATCTGGTGGAGGGGCGGGTGCAG
AACCGGGACCTGTCGGCTTACGGTGTCGCGCGGTTTTAG

Upstream 100 bases:

>100_bases
TCATCGCGCCATCCATTCAGGCCGATATCTTCGCGCTGGTCCTGTGCACGCCGGTGATCATCAGCCAGTTGGTGAAGCGC
CGCACGGTGGCCCCAGCCGG

Downstream 100 bases:

>100_bases
TCGGACATGGCCTAGTCTTCCGTCGCCTCGCCAAAACGCGCCTTCATGCGATCCACGATCTGATCGCGGGCCTGGCGGTA
GCTGGTCAGCTTTGCTTCGC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MNDDTTSVLGAGIVGLCCALSLAERGHKVRVIDRDAPGRATSYGNAGVISPWSIVPQSMPGLWRKIPGLLMDPGKPLRVR
ASHWPRMVGWGLRFLANGREDRVRQVSDAMEHLCGPSVDLYRRHLSGTGHEHLVKDACYIHAFRNAGQADLSGLDYSLRA
EKGADMAVLGADDLRALEPALSPEFKAAVLIKGQARADSPGAICAAIAEKARAMGVTFVHDDVVGVARDGDGWRIDCASG
PRHSDTLVVAMGVWSAAMLKGMGLRLPLQAERGYHVEFEGPGVALTHSVMDVDRKVVLSSMEGRIRIAGQAEFAAIDAPP
DPTRKAVLTRQASAALPGLNAREAEVWMGHRPSFPDSLPAIGEVQGQEGLFACFGHSHYGLMMAPKSGEIVADLVEGRVQ
NRDLSAYGVARF

Sequences:

>Translated_412_residues
MNDDTTSVLGAGIVGLCCALSLAERGHKVRVIDRDAPGRATSYGNAGVISPWSIVPQSMPGLWRKIPGLLMDPGKPLRVR
ASHWPRMVGWGLRFLANGREDRVRQVSDAMEHLCGPSVDLYRRHLSGTGHEHLVKDACYIHAFRNAGQADLSGLDYSLRA
EKGADMAVLGADDLRALEPALSPEFKAAVLIKGQARADSPGAICAAIAEKARAMGVTFVHDDVVGVARDGDGWRIDCASG
PRHSDTLVVAMGVWSAAMLKGMGLRLPLQAERGYHVEFEGPGVALTHSVMDVDRKVVLSSMEGRIRIAGQAEFAAIDAPP
DPTRKAVLTRQASAALPGLNAREAEVWMGHRPSFPDSLPAIGEVQGQEGLFACFGHSHYGLMMAPKSGEIVADLVEGRVQ
NRDLSAYGVARF
>Mature_412_residues
MNDDTTSVLGAGIVGLCCALSLAERGHKVRVIDRDAPGRATSYGNAGVISPWSIVPQSMPGLWRKIPGLLMDPGKPLRVR
ASHWPRMVGWGLRFLANGREDRVRQVSDAMEHLCGPSVDLYRRHLSGTGHEHLVKDACYIHAFRNAGQADLSGLDYSLRA
EKGADMAVLGADDLRALEPALSPEFKAAVLIKGQARADSPGAICAAIAEKARAMGVTFVHDDVVGVARDGDGWRIDCASG
PRHSDTLVVAMGVWSAAMLKGMGLRLPLQAERGYHVEFEGPGVALTHSVMDVDRKVVLSSMEGRIRIAGQAEFAAIDAPP
DPTRKAVLTRQASAALPGLNAREAEVWMGHRPSFPDSLPAIGEVQGQEGLFACFGHSHYGLMMAPKSGEIVADLVEGRVQ
NRDLSAYGVARF

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=415, Percent_Identity=27.710843373494, Blast_Score=126, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 44132; Mature: 44132

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDDTTSVLGAGIVGLCCALSLAERGHKVRVIDRDAPGRATSYGNAGVISPWSIVPQSMP
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCC
GLWRKIPGLLMDPGKPLRVRASHWPRMVGWGLRFLANGREDRVRQVSDAMEHLCGPSVDL
HHHHHCCCCEECCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH
YRRHLSGTGHEHLVKDACYIHAFRNAGQADLSGLDYSLRAEKGADMAVLGADDLRALEPA
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEECCCHHHHHCCC
LSPEFKAAVLIKGQARADSPGAICAAIAEKARAMGVTFVHDDVVGVARDGDGWRIDCASG
CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCEEEEEECCCCCEEECCCC
PRHSDTLVVAMGVWSAAMLKGMGLRLPLQAERGYHVEFEGPGVALTHSVMDVDRKVVLSS
CCCCCEEEEEEHHHHHHHHHCCCCEEEEECCCCEEEEECCCCEEEEHHHHHHHHHHHHHC
MEGRIRIAGQAEFAAIDAPPDPTRKAVLTRQASAALPGLNAREAEVWMGHRPSFPDSLPA
CCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCC
IGEVQGQEGLFACFGHSHYGLMMAPKSGEIVADLVEGRVQNRDLSAYGVARF
CCCCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHCHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNDDTTSVLGAGIVGLCCALSLAERGHKVRVIDRDAPGRATSYGNAGVISPWSIVPQSMP
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCC
GLWRKIPGLLMDPGKPLRVRASHWPRMVGWGLRFLANGREDRVRQVSDAMEHLCGPSVDL
HHHHHCCCCEECCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH
YRRHLSGTGHEHLVKDACYIHAFRNAGQADLSGLDYSLRAEKGADMAVLGADDLRALEPA
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEECCCHHHHHCCC
LSPEFKAAVLIKGQARADSPGAICAAIAEKARAMGVTFVHDDVVGVARDGDGWRIDCASG
CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCEEEEEECCCCCEEECCCC
PRHSDTLVVAMGVWSAAMLKGMGLRLPLQAERGYHVEFEGPGVALTHSVMDVDRKVVLSS
CCCCCEEEEEEHHHHHHHHHCCCCEEEEECCCCEEEEECCCCEEEEHHHHHHHHHHHHHC
MEGRIRIAGQAEFAAIDAPPDPTRKAVLTRQASAALPGLNAREAEVWMGHRPSFPDSLPA
CCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCC
IGEVQGQEGLFACFGHSHYGLMMAPKSGEIVADLVEGRVQNRDLSAYGVARF
CCCCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA