Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055351

Identifier: 89055351

GI number: 89055351

Start: 2880278

End: 2881192

Strand: Reverse

Name: 89055351

Synonym: Jann_2860

Alternate gene names: NA

Gene position: 2881192-2880278 (Counterclockwise)

Preceding gene: 89055352

Following gene: 89055348

Centisome position: 66.73

GC content: 60.22

Gene sequence:

>915_bases
ATGACCGCAAGCTTTGCCTTTCCGTTCCTGAGCCTACCGGATGAGGCTGTAACACTGGGACGCTGGATGATCGGCCAGAC
CGGTGGACCTCTCCCGCCTATGAAACCCATTTTCGACGAATGGGATTACGCAGCGGATATCGAGTTTCGCGGTTCCATAT
CGATCGACCGGCGGGTCGCAGCCGAGATGCTTGCGATCCCGGACGAAGAACTGAAGCTCGCGATCGTTCTCAAAATTGGT
ACGGGTCGGGGTCGCTTTCCAAGGATCGTCGAACGCGTGAGTTCTCGATTTGTCGATGCGGAGACGGATCAGCCGGTGGA
ACTGCATGCAATCGTACCTGGAAATACACTGTCTGGTCGTCTGCATGTGCGCATCGACGTGCTCCTCGCGACGCCAGCCG
AGAATGCCTCGATCCTGTCCCCCACCCGCACCGGATCTCGCCTTTGGACGGACGAATTCTCGGTCGAGCTCGAGGATGGT
GGCGACAACCGGTTCCCGATCGAGGTCGTCTCCTTCACCGAGACGTTCCCTAACCACCGGCACGTCACGGCGCCTTGGTA
TCTCTCTTGGAAGCCGGGAGGGCTCTCCGCAGATTTCGGGGGCTCGATCCGCCTCTACGTCAATTCGGACCATGAGGAAT
TGGCGGAACGGGTCGTGAGCGGCGATACGCTCACGCTGCAGGCGATCCTCGGTGACGTGATGGTGCAGATTGTCGGGGCC
GCTCTCGACGCGGAAGATGTCGCGGAGCAACTCAATGGATGCGAGGAAGGCTCGGTCGGCGCGCAGATCGCTGGCTGGCT
CGACTTGGCGTTTCCCGGCCGCGAACTGTCCGAAGTCAGGAACATCCGGCACAGCCTGCCGGGCCATTTCCATGCCAGCA
TCCATGCTGCGGCCGAATTAGGGGATATCGAATGA

Upstream 100 bases:

>100_bases
TTAGGATCGAGGAGGTGCAGGGAACCGTCTCCTGCCGTGTCACCGTGCCGGAAGATTCAGCCGTCGGCATCCGCTTCAGC
TTCGAGGAGGAAAGTGCCAA

Downstream 100 bases:

>100_bases
GCAATGTGAGGCTTCTTCCGCGCCTGAACGCTATTGGTGTCACGAGATGCATGGAGGATCTCGAACGTCTCGCCGACGAC
AAAGGCGAACTCTTTGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTASFAFPFLSLPDEAVTLGRWMIGQTGGPLPPMKPIFDEWDYAADIEFRGSISIDRRVAAEMLAIPDEELKLAIVLKIG
TGRGRFPRIVERVSSRFVDAETDQPVELHAIVPGNTLSGRLHVRIDVLLATPAENASILSPTRTGSRLWTDEFSVELEDG
GDNRFPIEVVSFTETFPNHRHVTAPWYLSWKPGGLSADFGGSIRLYVNSDHEELAERVVSGDTLTLQAILGDVMVQIVGA
ALDAEDVAEQLNGCEEGSVGAQIAGWLDLAFPGRELSEVRNIRHSLPGHFHASIHAAAELGDIE

Sequences:

>Translated_304_residues
MTASFAFPFLSLPDEAVTLGRWMIGQTGGPLPPMKPIFDEWDYAADIEFRGSISIDRRVAAEMLAIPDEELKLAIVLKIG
TGRGRFPRIVERVSSRFVDAETDQPVELHAIVPGNTLSGRLHVRIDVLLATPAENASILSPTRTGSRLWTDEFSVELEDG
GDNRFPIEVVSFTETFPNHRHVTAPWYLSWKPGGLSADFGGSIRLYVNSDHEELAERVVSGDTLTLQAILGDVMVQIVGA
ALDAEDVAEQLNGCEEGSVGAQIAGWLDLAFPGRELSEVRNIRHSLPGHFHASIHAAAELGDIE
>Mature_303_residues
TASFAFPFLSLPDEAVTLGRWMIGQTGGPLPPMKPIFDEWDYAADIEFRGSISIDRRVAAEMLAIPDEELKLAIVLKIGT
GRGRFPRIVERVSSRFVDAETDQPVELHAIVPGNTLSGRLHVRIDVLLATPAENASILSPTRTGSRLWTDEFSVELEDGG
DNRFPIEVVSFTETFPNHRHVTAPWYLSWKPGGLSADFGGSIRLYVNSDHEELAERVVSGDTLTLQAILGDVMVQIVGAA
LDAEDVAEQLNGCEEGSVGAQIAGWLDLAFPGRELSEVRNIRHSLPGHFHASIHAAAELGDIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33175; Mature: 33044

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASFAFPFLSLPDEAVTLGRWMIGQTGGPLPPMKPIFDEWDYAADIEFRGSISIDRRVA
CCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCHHHHCCCCEECEEECCCCCHHHHHH
AEMLAIPDEELKLAIVLKIGTGRGRFPRIVERVSSRFVDAETDQPVELHAIVPGNTLSGR
HHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCE
LHVRIDVLLATPAENASILSPTRTGSRLWTDEFSVELEDGGDNRFPIEVVSFTETFPNHR
EEEEEEEEEECCCCCCEEECCCCCCCEEECCEEEEEEECCCCCCCCEEEEEEECCCCCCC
HVTAPWYLSWKPGGLSADFGGSIRLYVNSDHEELAERVVSGDTLTLQAILGDVMVQIVGA
EEECCEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH
ALDAEDVAEQLNGCEEGSVGAQIAGWLDLAFPGRELSEVRNIRHSLPGHFHASIHAAAEL
CCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEHHHC
GDIE
CCCC
>Mature Secondary Structure 
TASFAFPFLSLPDEAVTLGRWMIGQTGGPLPPMKPIFDEWDYAADIEFRGSISIDRRVA
CCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCHHHHCCCCEECEEECCCCCHHHHHH
AEMLAIPDEELKLAIVLKIGTGRGRFPRIVERVSSRFVDAETDQPVELHAIVPGNTLSGR
HHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCE
LHVRIDVLLATPAENASILSPTRTGSRLWTDEFSVELEDGGDNRFPIEVVSFTETFPNHR
EEEEEEEEEECCCCCCEEECCCCCCCEEECCEEEEEEECCCCCCCCEEEEEEECCCCCCC
HVTAPWYLSWKPGGLSADFGGSIRLYVNSDHEELAERVVSGDTLTLQAILGDVMVQIVGA
EEECCEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH
ALDAEDVAEQLNGCEEGSVGAQIAGWLDLAFPGRELSEVRNIRHSLPGHFHASIHAAAEL
CCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEHHHC
GDIE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA