| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055352
Identifier: 89055352
GI number: 89055352
Start: 2881189
End: 2883036
Strand: Reverse
Name: 89055352
Synonym: Jann_2861
Alternate gene names: NA
Gene position: 2883036-2881189 (Counterclockwise)
Preceding gene: 89055353
Following gene: 89055351
Centisome position: 66.77
GC content: 60.34
Gene sequence:
>1848_bases ATGACCCCACTTGATCTGCATAGCGAGAAATTTGCTCGGACCGGAAACATCGCCGGCGAGGGGTTTCGACGCCTCTTGGG TCGCCCTACGCTTGGCCTCCTACAAACGGTGATCCGGGAAGCACTGCAGAACTCGGTCGATGCGGCACCTAGGGGCAACA AGGTAGAGGTTCTTCTGCGGTTTCGGACGCTAGAAGGTGAGACGCTTGCCTCGATGCGCGATTTCTTTTTCGGGATGCTC CCGCCGAAAGAGGCAGATTCGACCAACGAGGATGACGACAAGGCTAGCTTGCGCGACCTCCTTGGCGAGGAACGCCTCTC GATTCTTGAGATCGCCGATTTCAATACCACTGGCTTGGCGGGACCTACCCGCGCGGATGTCGCGATGGGTGAAGAAGACC TCGATTTCGTTAATTTTCTACGCAATGTCGGCGCGGCGCGTGACACGCAACACGGTGGGGGGACCTATGGTTACGGAAAG ACTTCGCTTTATTCATTGAGCCGCGTCTCCACCATTATCGCAGATAGCCAGACCACCTGCGATGGAAGCCCTGTTCGCCG GATCATGGGATGCCATCTGGGCGATGCCTTTGAGGCTGTCACGGACGAGGCGCGTCGCTGCTTCACCGGGCGGCATTGGT GGGGGCGTCACGATGACGAAGGTGGCGTGGAACCGCTCGAGGGCGCGGAAGCGGTCGAGCTCTCCAAACTCCTTGGACTT CCTTCGCGAAACGAGAGCCTGCCTGGTACGACGATCGCGATCATTGCTCCCCACGTGGATCGCGGGGAAGATCTGCGTGC TGAACTCGTAGAAACTGTTCTCTGGAACTTCTGGCCGAGGATGTGCCGTTTTACGTCGCCAGAGCGAAAGATTGAGGTGC GTGTCGAATTCGAGGGCGAGCAAGTCGAGATCCCGGTGCCCGAGAATTACCCGCCGCTCGATCTTTATGCCCAAGCGTTG CGAAACGTTCGTGGCGAAGGTGACGGGGAAGTCACCACAATCCGAAGCGGTAAACCGATTGCTGACCTCGGCCGTCTCTC GATTGTCCGGGGACTGAATGCGCCGCGCAACCTGATGGCGCTGCGCGAGGAGAGCCCGATGCGCCAGCAGGCGCATGCCA TTGCGCTGATGCGGCCCGTGGAACTGGTCGTCCGGTACCTGCCCGGCGAGGCCTTCGCGGACAATCGCTTCGAATGGGCA GGTGTCTTCATCTGCTCGAAGGAGGACGAGGTCGAGAAGGCCTTCGCCGTTGCCGAACCTCCGGCACATGACGACTGGAT CCCTGACATGCTGCCGAAGGGCCGATCCAAGACCTTCGTCAATGTGGCGCTTCGGGAACTGAAACTGGCTGCGGCGACCT ACGTCCAGCCGATGGCTGCCCTTGGAACGGGCGAGGATCGCGGGCCCTCTGTTGCCAAGACCGCGGCCAAGCTGGGCAGA CTTCTGTCCAGCACCTCGGGCAAGGGGCCGGGTCGGGCGACCTCCCCCAGCGGTATCGGGAGCAGGAAGAAGATCACGAT CTCCGCACCACGTTTCGTTGGTCTTGAGCACCATGACGGACAGCGCGTAGCAAGGTTCGAGGCTAACCTGACCAACGATG GCAGTCGGCCTGATCTCATCCTTCATGGAAGTCCGCATCTGGTGCTGGATGGCTCCTTGACCTCGGCAGACGATCTGCCC GGCGACATAGTTGTCGACCTCGTGGACCTGTCACTCGGGGATAGGATCGCCGGTTCCGAAGGAATTAGGATCGAGGAGGT GCAGGGAACCGTCTCCTGCCGTGTCACCGTGCCGGAAGATTCAGCCGTCGGCATCCGCTTCAGCTTCGAGGAGGAAAGTG CCAAATGA
Upstream 100 bases:
>100_bases CGGGAGTCGTGAATTTAACCTACGAGATCGACCTCTCGACCGCCCGTGGGCATCTGCTCGACCCGGCGCAGACGGCAGCC GTCTTGTCGGAGTTCACCTC
Downstream 100 bases:
>100_bases CCGCAAGCTTTGCCTTTCCGTTCCTGAGCCTACCGGATGAGGCTGTAACACTGGGACGCTGGATGATCGGCCAGACCGGT GGACCTCTCCCGCCTATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 615; Mature: 614
Protein sequence:
>615_residues MTPLDLHSEKFARTGNIAGEGFRRLLGRPTLGLLQTVIREALQNSVDAAPRGNKVEVLLRFRTLEGETLASMRDFFFGML PPKEADSTNEDDDKASLRDLLGEERLSILEIADFNTTGLAGPTRADVAMGEEDLDFVNFLRNVGAARDTQHGGGTYGYGK TSLYSLSRVSTIIADSQTTCDGSPVRRIMGCHLGDAFEAVTDEARRCFTGRHWWGRHDDEGGVEPLEGAEAVELSKLLGL PSRNESLPGTTIAIIAPHVDRGEDLRAELVETVLWNFWPRMCRFTSPERKIEVRVEFEGEQVEIPVPENYPPLDLYAQAL RNVRGEGDGEVTTIRSGKPIADLGRLSIVRGLNAPRNLMALREESPMRQQAHAIALMRPVELVVRYLPGEAFADNRFEWA GVFICSKEDEVEKAFAVAEPPAHDDWIPDMLPKGRSKTFVNVALRELKLAAATYVQPMAALGTGEDRGPSVAKTAAKLGR LLSSTSGKGPGRATSPSGIGSRKKITISAPRFVGLEHHDGQRVARFEANLTNDGSRPDLILHGSPHLVLDGSLTSADDLP GDIVVDLVDLSLGDRIAGSEGIRIEEVQGTVSCRVTVPEDSAVGIRFSFEEESAK
Sequences:
>Translated_615_residues MTPLDLHSEKFARTGNIAGEGFRRLLGRPTLGLLQTVIREALQNSVDAAPRGNKVEVLLRFRTLEGETLASMRDFFFGML PPKEADSTNEDDDKASLRDLLGEERLSILEIADFNTTGLAGPTRADVAMGEEDLDFVNFLRNVGAARDTQHGGGTYGYGK TSLYSLSRVSTIIADSQTTCDGSPVRRIMGCHLGDAFEAVTDEARRCFTGRHWWGRHDDEGGVEPLEGAEAVELSKLLGL PSRNESLPGTTIAIIAPHVDRGEDLRAELVETVLWNFWPRMCRFTSPERKIEVRVEFEGEQVEIPVPENYPPLDLYAQAL RNVRGEGDGEVTTIRSGKPIADLGRLSIVRGLNAPRNLMALREESPMRQQAHAIALMRPVELVVRYLPGEAFADNRFEWA GVFICSKEDEVEKAFAVAEPPAHDDWIPDMLPKGRSKTFVNVALRELKLAAATYVQPMAALGTGEDRGPSVAKTAAKLGR LLSSTSGKGPGRATSPSGIGSRKKITISAPRFVGLEHHDGQRVARFEANLTNDGSRPDLILHGSPHLVLDGSLTSADDLP GDIVVDLVDLSLGDRIAGSEGIRIEEVQGTVSCRVTVPEDSAVGIRFSFEEESAK >Mature_614_residues TPLDLHSEKFARTGNIAGEGFRRLLGRPTLGLLQTVIREALQNSVDAAPRGNKVEVLLRFRTLEGETLASMRDFFFGMLP PKEADSTNEDDDKASLRDLLGEERLSILEIADFNTTGLAGPTRADVAMGEEDLDFVNFLRNVGAARDTQHGGGTYGYGKT SLYSLSRVSTIIADSQTTCDGSPVRRIMGCHLGDAFEAVTDEARRCFTGRHWWGRHDDEGGVEPLEGAEAVELSKLLGLP SRNESLPGTTIAIIAPHVDRGEDLRAELVETVLWNFWPRMCRFTSPERKIEVRVEFEGEQVEIPVPENYPPLDLYAQALR NVRGEGDGEVTTIRSGKPIADLGRLSIVRGLNAPRNLMALREESPMRQQAHAIALMRPVELVVRYLPGEAFADNRFEWAG VFICSKEDEVEKAFAVAEPPAHDDWIPDMLPKGRSKTFVNVALRELKLAAATYVQPMAALGTGEDRGPSVAKTAAKLGRL LSSTSGKGPGRATSPSGIGSRKKITISAPRFVGLEHHDGQRVARFEANLTNDGSRPDLILHGSPHLVLDGSLTSADDLPG DIVVDLVDLSLGDRIAGSEGIRIEEVQGTVSCRVTVPEDSAVGIRFSFEEESAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67051; Mature: 66920
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLDLHSEKFARTGNIAGEGFRRLLGRPTLGLLQTVIREALQNSVDAAPRGNKVEVLLR CCCCCCCHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE FRTLEGETLASMRDFFFGMLPPKEADSTNEDDDKASLRDLLGEERLSILEIADFNTTGLA EEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCC GPTRADVAMGEEDLDFVNFLRNVGAARDTQHGGGTYGYGKTSLYSLSRVSTIIADSQTTC CCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC DGSPVRRIMGCHLGDAFEAVTDEARRCFTGRHWWGRHDDEGGVEPLEGAEAVELSKLLGL CCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC PSRNESLPGTTIAIIAPHVDRGEDLRAELVETVLWNFWPRMCRFTSPERKIEVRVEFEGE CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC QVEIPVPENYPPLDLYAQALRNVRGEGDGEVTTIRSGKPIADLGRLSIVRGLNAPRNLMA EEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHH LREESPMRQQAHAIALMRPVELVVRYLPGEAFADNRFEWAGVFICSKEDEVEKAFAVAEP HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCC PAHDDWIPDMLPKGRSKTFVNVALRELKLAAATYVQPMAALGTGEDRGPSVAKTAAKLGR CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LLSSTSGKGPGRATSPSGIGSRKKITISAPRFVGLEHHDGQRVARFEANLTNDGSRPDLI HHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCEEEEEECCCCCCCCCCCEE LHGSPHLVLDGSLTSADDLPGDIVVDLVDLSLGDRIAGSEGIRIEEVQGTVSCRVTVPED EECCCCEEEECCCCCCCCCCCHHEEEEECCCCCCCCCCCCCCEEEEECCEEEEEEECCCC SAVGIRFSFEEESAK CCEEEEEECCCCCCC >Mature Secondary Structure TPLDLHSEKFARTGNIAGEGFRRLLGRPTLGLLQTVIREALQNSVDAAPRGNKVEVLLR CCCCCCHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE FRTLEGETLASMRDFFFGMLPPKEADSTNEDDDKASLRDLLGEERLSILEIADFNTTGLA EEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCC GPTRADVAMGEEDLDFVNFLRNVGAARDTQHGGGTYGYGKTSLYSLSRVSTIIADSQTTC CCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC DGSPVRRIMGCHLGDAFEAVTDEARRCFTGRHWWGRHDDEGGVEPLEGAEAVELSKLLGL CCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC PSRNESLPGTTIAIIAPHVDRGEDLRAELVETVLWNFWPRMCRFTSPERKIEVRVEFEGE CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC QVEIPVPENYPPLDLYAQALRNVRGEGDGEVTTIRSGKPIADLGRLSIVRGLNAPRNLMA EEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHH LREESPMRQQAHAIALMRPVELVVRYLPGEAFADNRFEWAGVFICSKEDEVEKAFAVAEP HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCC PAHDDWIPDMLPKGRSKTFVNVALRELKLAAATYVQPMAALGTGEDRGPSVAKTAAKLGR CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LLSSTSGKGPGRATSPSGIGSRKKITISAPRFVGLEHHDGQRVARFEANLTNDGSRPDLI HHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCEEEEEECCCCCCCCCCCEE LHGSPHLVLDGSLTSADDLPGDIVVDLVDLSLGDRIAGSEGIRIEEVQGTVSCRVTVPED EECCCCEEEECCCCCCCCCCCHHEEEEECCCCCCCCCCCCCCEEEEECCEEEEEEECCCC SAVGIRFSFEEESAK CCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA