Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055352

Identifier: 89055352

GI number: 89055352

Start: 2881189

End: 2883036

Strand: Reverse

Name: 89055352

Synonym: Jann_2861

Alternate gene names: NA

Gene position: 2883036-2881189 (Counterclockwise)

Preceding gene: 89055353

Following gene: 89055351

Centisome position: 66.77

GC content: 60.34

Gene sequence:

>1848_bases
ATGACCCCACTTGATCTGCATAGCGAGAAATTTGCTCGGACCGGAAACATCGCCGGCGAGGGGTTTCGACGCCTCTTGGG
TCGCCCTACGCTTGGCCTCCTACAAACGGTGATCCGGGAAGCACTGCAGAACTCGGTCGATGCGGCACCTAGGGGCAACA
AGGTAGAGGTTCTTCTGCGGTTTCGGACGCTAGAAGGTGAGACGCTTGCCTCGATGCGCGATTTCTTTTTCGGGATGCTC
CCGCCGAAAGAGGCAGATTCGACCAACGAGGATGACGACAAGGCTAGCTTGCGCGACCTCCTTGGCGAGGAACGCCTCTC
GATTCTTGAGATCGCCGATTTCAATACCACTGGCTTGGCGGGACCTACCCGCGCGGATGTCGCGATGGGTGAAGAAGACC
TCGATTTCGTTAATTTTCTACGCAATGTCGGCGCGGCGCGTGACACGCAACACGGTGGGGGGACCTATGGTTACGGAAAG
ACTTCGCTTTATTCATTGAGCCGCGTCTCCACCATTATCGCAGATAGCCAGACCACCTGCGATGGAAGCCCTGTTCGCCG
GATCATGGGATGCCATCTGGGCGATGCCTTTGAGGCTGTCACGGACGAGGCGCGTCGCTGCTTCACCGGGCGGCATTGGT
GGGGGCGTCACGATGACGAAGGTGGCGTGGAACCGCTCGAGGGCGCGGAAGCGGTCGAGCTCTCCAAACTCCTTGGACTT
CCTTCGCGAAACGAGAGCCTGCCTGGTACGACGATCGCGATCATTGCTCCCCACGTGGATCGCGGGGAAGATCTGCGTGC
TGAACTCGTAGAAACTGTTCTCTGGAACTTCTGGCCGAGGATGTGCCGTTTTACGTCGCCAGAGCGAAAGATTGAGGTGC
GTGTCGAATTCGAGGGCGAGCAAGTCGAGATCCCGGTGCCCGAGAATTACCCGCCGCTCGATCTTTATGCCCAAGCGTTG
CGAAACGTTCGTGGCGAAGGTGACGGGGAAGTCACCACAATCCGAAGCGGTAAACCGATTGCTGACCTCGGCCGTCTCTC
GATTGTCCGGGGACTGAATGCGCCGCGCAACCTGATGGCGCTGCGCGAGGAGAGCCCGATGCGCCAGCAGGCGCATGCCA
TTGCGCTGATGCGGCCCGTGGAACTGGTCGTCCGGTACCTGCCCGGCGAGGCCTTCGCGGACAATCGCTTCGAATGGGCA
GGTGTCTTCATCTGCTCGAAGGAGGACGAGGTCGAGAAGGCCTTCGCCGTTGCCGAACCTCCGGCACATGACGACTGGAT
CCCTGACATGCTGCCGAAGGGCCGATCCAAGACCTTCGTCAATGTGGCGCTTCGGGAACTGAAACTGGCTGCGGCGACCT
ACGTCCAGCCGATGGCTGCCCTTGGAACGGGCGAGGATCGCGGGCCCTCTGTTGCCAAGACCGCGGCCAAGCTGGGCAGA
CTTCTGTCCAGCACCTCGGGCAAGGGGCCGGGTCGGGCGACCTCCCCCAGCGGTATCGGGAGCAGGAAGAAGATCACGAT
CTCCGCACCACGTTTCGTTGGTCTTGAGCACCATGACGGACAGCGCGTAGCAAGGTTCGAGGCTAACCTGACCAACGATG
GCAGTCGGCCTGATCTCATCCTTCATGGAAGTCCGCATCTGGTGCTGGATGGCTCCTTGACCTCGGCAGACGATCTGCCC
GGCGACATAGTTGTCGACCTCGTGGACCTGTCACTCGGGGATAGGATCGCCGGTTCCGAAGGAATTAGGATCGAGGAGGT
GCAGGGAACCGTCTCCTGCCGTGTCACCGTGCCGGAAGATTCAGCCGTCGGCATCCGCTTCAGCTTCGAGGAGGAAAGTG
CCAAATGA

Upstream 100 bases:

>100_bases
CGGGAGTCGTGAATTTAACCTACGAGATCGACCTCTCGACCGCCCGTGGGCATCTGCTCGACCCGGCGCAGACGGCAGCC
GTCTTGTCGGAGTTCACCTC

Downstream 100 bases:

>100_bases
CCGCAAGCTTTGCCTTTCCGTTCCTGAGCCTACCGGATGAGGCTGTAACACTGGGACGCTGGATGATCGGCCAGACCGGT
GGACCTCTCCCGCCTATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 615; Mature: 614

Protein sequence:

>615_residues
MTPLDLHSEKFARTGNIAGEGFRRLLGRPTLGLLQTVIREALQNSVDAAPRGNKVEVLLRFRTLEGETLASMRDFFFGML
PPKEADSTNEDDDKASLRDLLGEERLSILEIADFNTTGLAGPTRADVAMGEEDLDFVNFLRNVGAARDTQHGGGTYGYGK
TSLYSLSRVSTIIADSQTTCDGSPVRRIMGCHLGDAFEAVTDEARRCFTGRHWWGRHDDEGGVEPLEGAEAVELSKLLGL
PSRNESLPGTTIAIIAPHVDRGEDLRAELVETVLWNFWPRMCRFTSPERKIEVRVEFEGEQVEIPVPENYPPLDLYAQAL
RNVRGEGDGEVTTIRSGKPIADLGRLSIVRGLNAPRNLMALREESPMRQQAHAIALMRPVELVVRYLPGEAFADNRFEWA
GVFICSKEDEVEKAFAVAEPPAHDDWIPDMLPKGRSKTFVNVALRELKLAAATYVQPMAALGTGEDRGPSVAKTAAKLGR
LLSSTSGKGPGRATSPSGIGSRKKITISAPRFVGLEHHDGQRVARFEANLTNDGSRPDLILHGSPHLVLDGSLTSADDLP
GDIVVDLVDLSLGDRIAGSEGIRIEEVQGTVSCRVTVPEDSAVGIRFSFEEESAK

Sequences:

>Translated_615_residues
MTPLDLHSEKFARTGNIAGEGFRRLLGRPTLGLLQTVIREALQNSVDAAPRGNKVEVLLRFRTLEGETLASMRDFFFGML
PPKEADSTNEDDDKASLRDLLGEERLSILEIADFNTTGLAGPTRADVAMGEEDLDFVNFLRNVGAARDTQHGGGTYGYGK
TSLYSLSRVSTIIADSQTTCDGSPVRRIMGCHLGDAFEAVTDEARRCFTGRHWWGRHDDEGGVEPLEGAEAVELSKLLGL
PSRNESLPGTTIAIIAPHVDRGEDLRAELVETVLWNFWPRMCRFTSPERKIEVRVEFEGEQVEIPVPENYPPLDLYAQAL
RNVRGEGDGEVTTIRSGKPIADLGRLSIVRGLNAPRNLMALREESPMRQQAHAIALMRPVELVVRYLPGEAFADNRFEWA
GVFICSKEDEVEKAFAVAEPPAHDDWIPDMLPKGRSKTFVNVALRELKLAAATYVQPMAALGTGEDRGPSVAKTAAKLGR
LLSSTSGKGPGRATSPSGIGSRKKITISAPRFVGLEHHDGQRVARFEANLTNDGSRPDLILHGSPHLVLDGSLTSADDLP
GDIVVDLVDLSLGDRIAGSEGIRIEEVQGTVSCRVTVPEDSAVGIRFSFEEESAK
>Mature_614_residues
TPLDLHSEKFARTGNIAGEGFRRLLGRPTLGLLQTVIREALQNSVDAAPRGNKVEVLLRFRTLEGETLASMRDFFFGMLP
PKEADSTNEDDDKASLRDLLGEERLSILEIADFNTTGLAGPTRADVAMGEEDLDFVNFLRNVGAARDTQHGGGTYGYGKT
SLYSLSRVSTIIADSQTTCDGSPVRRIMGCHLGDAFEAVTDEARRCFTGRHWWGRHDDEGGVEPLEGAEAVELSKLLGLP
SRNESLPGTTIAIIAPHVDRGEDLRAELVETVLWNFWPRMCRFTSPERKIEVRVEFEGEQVEIPVPENYPPLDLYAQALR
NVRGEGDGEVTTIRSGKPIADLGRLSIVRGLNAPRNLMALREESPMRQQAHAIALMRPVELVVRYLPGEAFADNRFEWAG
VFICSKEDEVEKAFAVAEPPAHDDWIPDMLPKGRSKTFVNVALRELKLAAATYVQPMAALGTGEDRGPSVAKTAAKLGRL
LSSTSGKGPGRATSPSGIGSRKKITISAPRFVGLEHHDGQRVARFEANLTNDGSRPDLILHGSPHLVLDGSLTSADDLPG
DIVVDLVDLSLGDRIAGSEGIRIEEVQGTVSCRVTVPEDSAVGIRFSFEEESAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67051; Mature: 66920

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLDLHSEKFARTGNIAGEGFRRLLGRPTLGLLQTVIREALQNSVDAAPRGNKVEVLLR
CCCCCCCHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
FRTLEGETLASMRDFFFGMLPPKEADSTNEDDDKASLRDLLGEERLSILEIADFNTTGLA
EEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCC
GPTRADVAMGEEDLDFVNFLRNVGAARDTQHGGGTYGYGKTSLYSLSRVSTIIADSQTTC
CCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
DGSPVRRIMGCHLGDAFEAVTDEARRCFTGRHWWGRHDDEGGVEPLEGAEAVELSKLLGL
CCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PSRNESLPGTTIAIIAPHVDRGEDLRAELVETVLWNFWPRMCRFTSPERKIEVRVEFEGE
CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC
QVEIPVPENYPPLDLYAQALRNVRGEGDGEVTTIRSGKPIADLGRLSIVRGLNAPRNLMA
EEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHH
LREESPMRQQAHAIALMRPVELVVRYLPGEAFADNRFEWAGVFICSKEDEVEKAFAVAEP
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCC
PAHDDWIPDMLPKGRSKTFVNVALRELKLAAATYVQPMAALGTGEDRGPSVAKTAAKLGR
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LLSSTSGKGPGRATSPSGIGSRKKITISAPRFVGLEHHDGQRVARFEANLTNDGSRPDLI
HHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCEEEEEECCCCCCCCCCCEE
LHGSPHLVLDGSLTSADDLPGDIVVDLVDLSLGDRIAGSEGIRIEEVQGTVSCRVTVPED
EECCCCEEEECCCCCCCCCCCHHEEEEECCCCCCCCCCCCCCEEEEECCEEEEEEECCCC
SAVGIRFSFEEESAK
CCEEEEEECCCCCCC
>Mature Secondary Structure 
TPLDLHSEKFARTGNIAGEGFRRLLGRPTLGLLQTVIREALQNSVDAAPRGNKVEVLLR
CCCCCCHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
FRTLEGETLASMRDFFFGMLPPKEADSTNEDDDKASLRDLLGEERLSILEIADFNTTGLA
EEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCC
GPTRADVAMGEEDLDFVNFLRNVGAARDTQHGGGTYGYGKTSLYSLSRVSTIIADSQTTC
CCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
DGSPVRRIMGCHLGDAFEAVTDEARRCFTGRHWWGRHDDEGGVEPLEGAEAVELSKLLGL
CCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PSRNESLPGTTIAIIAPHVDRGEDLRAELVETVLWNFWPRMCRFTSPERKIEVRVEFEGE
CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC
QVEIPVPENYPPLDLYAQALRNVRGEGDGEVTTIRSGKPIADLGRLSIVRGLNAPRNLMA
EEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHH
LREESPMRQQAHAIALMRPVELVVRYLPGEAFADNRFEWAGVFICSKEDEVEKAFAVAEP
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCC
PAHDDWIPDMLPKGRSKTFVNVALRELKLAAATYVQPMAALGTGEDRGPSVAKTAAKLGR
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LLSSTSGKGPGRATSPSGIGSRKKITISAPRFVGLEHHDGQRVARFEANLTNDGSRPDLI
HHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCEEEEEECCCCCCCCCCCEE
LHGSPHLVLDGSLTSADDLPGDIVVDLVDLSLGDRIAGSEGIRIEEVQGTVSCRVTVPED
EECCCCEEEECCCCCCCCCCCHHEEEEECCCCCCCCCCCCCCEEEEECCEEEEEEECCCC
SAVGIRFSFEEESAK
CCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA