| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is xsc [H]
Identifier: 89055337
GI number: 89055337
Start: 2862448
End: 2864229
Strand: Direct
Name: xsc [H]
Synonym: Jann_2846
Alternate gene names: 89055337
Gene position: 2862448-2864229 (Clockwise)
Preceding gene: 89055336
Following gene: 89055338
Centisome position: 66.29
GC content: 62.74
Gene sequence:
>1782_bases ATGAAAATGACCACCGAAGAAGCCTTCGTCAAAACACTGCAAATGCACGGCATCGACAATGCATTCGGCATTATCGGCTC TGCGATGATGCCGATCTCGGATATCTTTCCCGATGCGGGCATCAAGTTCTGGGACTGTGCCCATGAAGGCTCCGCTGGCA TGATGTCCGATGGCTACACCCGCGCCACCGGCAAGATCTCCATGATGATCGCGCAAAACGGCCCCGGCATCACCAACTTC GTGACCGCCGTGAAGACCGCTTACTGGAACCACACGCCGCTGCTGCTGGTGACCCCGCAGGCGGCCAACAAGACCATCGG TCAGGGCGGTTTTCAGGAAGTCGAGCAGATGAAACTGTTCGAAGACATGGTCGCCTACCAAGAAGAGGTGCGCGACCCGA CCCGCGTGGCCGAAGTTCTGACCCGTGTGATTTCCCAGGCCAAGCGCCTGTCCGGCCCTGCCCAGATCAACATCCCGCGC GATTTCTGGACGCAAGTGGTCGACATCGAAATCCCCGAACCGATCGAATTCGAAGCCTCCCCCGGCGGCGAAAACTCCGT GGCCGAAGCCGCAGCCCTGCTGTCGCAGGCGAAGAACCCCGTCATCCTGAACGGCGCGGGCGTGGTCCTGTCCAAGGGCG GGATCGACGCCTCCCAGGCCCTGGCCGAACGCCTGACCGCGCCGGTCTGTGTCGGCTACCAGCACAACGATGCGTTCCCC GGAAACCACCCGCTTTTCGCAGGCCCGCTTGGCTATAACGGGTCCAAGGCGGGGATGGAGCTGATCAAGGACGCCGACGT CGTTTTGTGCCTTGGCACACGCCTCAACCCCTTCTCCACCCTGCCCGGCTACGGGATTGAATACTGGCCCGCTGACGCCA AGATCATTCAGGTCGACATCAACCCCGACCGCATCGGCCTGACCAAAAAGGTCACTGTGGGCATCGTGGGCGACGCCGCA AAGGTGGCCAACGGCATCCTGAACCAGCTTGCCGAGGATGCGGGCGATGCGGGGCGTGAGGATCGCAAGAACCACATCGC CCAGACCAAATCCGCCTGGGCGCAGGAGCTGTCGTCCATGACGGAAGAGGCCGACGATCCCGGCACCAACTGGAACGAGC GGGCCCGCGCGGCGAAGCCCAACTGGATGGCCCCCCGCATGGCGTGGCGCGCGATCCAGGCCGCCCTGCCGGTGGAGGCG ATCATCTCCAGCGATATCGGCAACAATTGCGCCATCGGCAACGCCTACCCGTCGTTCAATGAGGGCCGAAAGTACCTAGC CCCCGGCCTCTTCGGTCCCTGCGGCTACGGCCTTCCGGCGATTGTCGGCGCAAAGATCGGCCAGCCGGACGTGCCCGTTG TGGGCTTTGCCGGGGACGGCGCATTTGGCATCGCGGTCAATGAATTAACGGCCATCGGGCGCGGCGACTGGCCCGCCATC ACGCAGATCGTCTTCCGCAACTACCAGTGGGGCGCGGAAAAGCGGAACTCCACGCTGTGGTTTGACGACAACTTCGTCGG CACGGAACTGGATGAAGACGTATCCTACTCCGGCATCGCCAACGCGTGCGGTCTGAAGGGCGTGGTCGCCCGCACCCAGG AGGAGCTGACGGCAGCGCTGGATCAGGCGATCAAGGACCAGATGGAAAATGGGATCACAACGCTGATCGAGGCGATGATC AACCAGGAATTGGGCGATCCCTTCCGCCGCGATGCGATGAAGAAGCCCGTGGAAGTGGCCGGTATCTCGGCGTCGGACAT GAAGCCGCAGAAGGTCGCCTGA
Upstream 100 bases:
>100_bases TTATCCACTGAGATAATTGGCCCTACCGTTTTTGAGACTTCTGGGCTCATTAAGGCGCAATCGCGGACCCACGGGGGAGT CCGCTCTCGGGAGATTCGCC
Downstream 100 bases:
>100_bases TCATGGGCGGGGGGCCAGATGATCCGCTGGCCGCCATTGCCGCCCGTGCCGCGGCAGATATCAAGCACATCGTGCTGAGC GAAGGCAGTGATCCGCGCGT
Product: sulfoacetaldehyde acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 593; Mature: 593
Protein sequence:
>593_residues MKMTTEEAFVKTLQMHGIDNAFGIIGSAMMPISDIFPDAGIKFWDCAHEGSAGMMSDGYTRATGKISMMIAQNGPGITNF VTAVKTAYWNHTPLLLVTPQAANKTIGQGGFQEVEQMKLFEDMVAYQEEVRDPTRVAEVLTRVISQAKRLSGPAQINIPR DFWTQVVDIEIPEPIEFEASPGGENSVAEAAALLSQAKNPVILNGAGVVLSKGGIDASQALAERLTAPVCVGYQHNDAFP GNHPLFAGPLGYNGSKAGMELIKDADVVLCLGTRLNPFSTLPGYGIEYWPADAKIIQVDINPDRIGLTKKVTVGIVGDAA KVANGILNQLAEDAGDAGREDRKNHIAQTKSAWAQELSSMTEEADDPGTNWNERARAAKPNWMAPRMAWRAIQAALPVEA IISSDIGNNCAIGNAYPSFNEGRKYLAPGLFGPCGYGLPAIVGAKIGQPDVPVVGFAGDGAFGIAVNELTAIGRGDWPAI TQIVFRNYQWGAEKRNSTLWFDDNFVGTELDEDVSYSGIANACGLKGVVARTQEELTAALDQAIKDQMENGITTLIEAMI NQELGDPFRRDAMKKPVEVAGISASDMKPQKVA
Sequences:
>Translated_593_residues MKMTTEEAFVKTLQMHGIDNAFGIIGSAMMPISDIFPDAGIKFWDCAHEGSAGMMSDGYTRATGKISMMIAQNGPGITNF VTAVKTAYWNHTPLLLVTPQAANKTIGQGGFQEVEQMKLFEDMVAYQEEVRDPTRVAEVLTRVISQAKRLSGPAQINIPR DFWTQVVDIEIPEPIEFEASPGGENSVAEAAALLSQAKNPVILNGAGVVLSKGGIDASQALAERLTAPVCVGYQHNDAFP GNHPLFAGPLGYNGSKAGMELIKDADVVLCLGTRLNPFSTLPGYGIEYWPADAKIIQVDINPDRIGLTKKVTVGIVGDAA KVANGILNQLAEDAGDAGREDRKNHIAQTKSAWAQELSSMTEEADDPGTNWNERARAAKPNWMAPRMAWRAIQAALPVEA IISSDIGNNCAIGNAYPSFNEGRKYLAPGLFGPCGYGLPAIVGAKIGQPDVPVVGFAGDGAFGIAVNELTAIGRGDWPAI TQIVFRNYQWGAEKRNSTLWFDDNFVGTELDEDVSYSGIANACGLKGVVARTQEELTAALDQAIKDQMENGITTLIEAMI NQELGDPFRRDAMKKPVEVAGISASDMKPQKVA >Mature_593_residues MKMTTEEAFVKTLQMHGIDNAFGIIGSAMMPISDIFPDAGIKFWDCAHEGSAGMMSDGYTRATGKISMMIAQNGPGITNF VTAVKTAYWNHTPLLLVTPQAANKTIGQGGFQEVEQMKLFEDMVAYQEEVRDPTRVAEVLTRVISQAKRLSGPAQINIPR DFWTQVVDIEIPEPIEFEASPGGENSVAEAAALLSQAKNPVILNGAGVVLSKGGIDASQALAERLTAPVCVGYQHNDAFP GNHPLFAGPLGYNGSKAGMELIKDADVVLCLGTRLNPFSTLPGYGIEYWPADAKIIQVDINPDRIGLTKKVTVGIVGDAA KVANGILNQLAEDAGDAGREDRKNHIAQTKSAWAQELSSMTEEADDPGTNWNERARAAKPNWMAPRMAWRAIQAALPVEA IISSDIGNNCAIGNAYPSFNEGRKYLAPGLFGPCGYGLPAIVGAKIGQPDVPVVGFAGDGAFGIAVNELTAIGRGDWPAI TQIVFRNYQWGAEKRNSTLWFDDNFVGTELDEDVSYSGIANACGLKGVVARTQEELTAALDQAIKDQMENGITTLIEAMI NQELGDPFRRDAMKKPVEVAGISASDMKPQKVA
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21361361, Length=598, Percent_Identity=23.2441471571906, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI93004078, Length=569, Percent_Identity=25.1318101933216, Blast_Score=121, Evalue=2e-27, Organism=Escherichia coli, GI1790104, Length=553, Percent_Identity=28.2097649186257, Blast_Score=186, Evalue=4e-48, Organism=Escherichia coli, GI87081685, Length=567, Percent_Identity=24.3386243386243, Blast_Score=183, Evalue=2e-47, Organism=Escherichia coli, GI1787096, Length=558, Percent_Identity=25.089605734767, Blast_Score=159, Evalue=6e-40, Organism=Escherichia coli, GI1786717, Length=588, Percent_Identity=26.1904761904762, Blast_Score=145, Evalue=8e-36, Organism=Escherichia coli, GI1788716, Length=596, Percent_Identity=25.3355704697987, Blast_Score=107, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17542570, Length=566, Percent_Identity=24.9116607773852, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17531299, Length=572, Percent_Identity=23.6013986013986, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17531301, Length=572, Percent_Identity=23.6013986013986, Blast_Score=106, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6323755, Length=567, Percent_Identity=24.3386243386243, Blast_Score=158, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6320816, Length=584, Percent_Identity=22.7739726027397, Blast_Score=124, Evalue=3e-29, Organism=Drosophila melanogaster, GI19922626, Length=565, Percent_Identity=25.3097345132743, Blast_Score=108, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017820 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.3.3.15 [H]
Molecular weight: Translated: 63530; Mature: 63530
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMTTEEAFVKTLQMHGIDNAFGIIGSAMMPISDIFPDAGIKFWDCAHEGSAGMMSDGYT CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCCCCCCCCE RATGKISMMIAQNGPGITNFVTAVKTAYWNHTPLLLVTPQAANKTIGQGGFQEVEQMKLF ECCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH EDMVAYQEEVRDPTRVAEVLTRVISQAKRLSGPAQINIPRDFWTQVVDIEIPEPIEFEAS HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCEEEEEECCCCCEECCC PGGENSVAEAAALLSQAKNPVILNGAGVVLSKGGIDASQALAERLTAPVCVGYQHNDAFP CCCCHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCC GNHPLFAGPLGYNGSKAGMELIKDADVVLCLGTRLNPFSTLPGYGIEYWPADAKIIQVDI CCCCEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEECCCCEEEEEEC NPDRIGLTKKVTVGIVGDAAKVANGILNQLAEDAGDAGREDRKNHIAQTKSAWAQELSSM CCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH TEEADDPGTNWNERARAAKPNWMAPRMAWRAIQAALPVEAIISSDIGNNCAIGNAYPSFN HHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHH EGRKYLAPGLFGPCGYGLPAIVGAKIGQPDVPVVGFAGDGAFGIAVNELTAIGRGDWPAI CCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCEEEEEHHHHHHCCCCCCHHH TQIVFRNYQWGAEKRNSTLWFDDNFVGTELDEDVSYSGIANACGLKGVVARTQEELTAAL HHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH DQAIKDQMENGITTLIEAMINQELGDPFRRDAMKKPVEVAGISASDMKPQKVA HHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEECCCCCCCCCCCCC >Mature Secondary Structure MKMTTEEAFVKTLQMHGIDNAFGIIGSAMMPISDIFPDAGIKFWDCAHEGSAGMMSDGYT CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCCCCCCCCE RATGKISMMIAQNGPGITNFVTAVKTAYWNHTPLLLVTPQAANKTIGQGGFQEVEQMKLF ECCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH EDMVAYQEEVRDPTRVAEVLTRVISQAKRLSGPAQINIPRDFWTQVVDIEIPEPIEFEAS HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCEEEEEECCCCCEECCC PGGENSVAEAAALLSQAKNPVILNGAGVVLSKGGIDASQALAERLTAPVCVGYQHNDAFP CCCCHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCC GNHPLFAGPLGYNGSKAGMELIKDADVVLCLGTRLNPFSTLPGYGIEYWPADAKIIQVDI CCCCEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEECCCCEEEEEEC NPDRIGLTKKVTVGIVGDAAKVANGILNQLAEDAGDAGREDRKNHIAQTKSAWAQELSSM CCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH TEEADDPGTNWNERARAAKPNWMAPRMAWRAIQAALPVEAIISSDIGNNCAIGNAYPSFN HHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHH EGRKYLAPGLFGPCGYGLPAIVGAKIGQPDVPVVGFAGDGAFGIAVNELTAIGRGDWPAI CCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCEEEEEHHHHHHCCCCCCHHH TQIVFRNYQWGAEKRNSTLWFDDNFVGTELDEDVSYSGIANACGLKGVVARTQEELTAAL HHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH DQAIKDQMENGITTLIEAMINQELGDPFRRDAMKKPVEVAGISASDMKPQKVA HHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481431 [H]