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The map label for this gene is cheD

Identifier: 89055336

GI number: 89055336

Start: 2861737

End: 2862222

Strand: Direct

Name: cheD

Synonym: Jann_2845

Alternate gene names: 89055336

Gene position: 2861737-2862222 (Clockwise)

Preceding gene: 89055335

Following gene: 89055337

Centisome position: 66.27

GC content: 66.67

Gene sequence:

>486_bases
ATGCAGGGGCAATTATACATTTCACAAACGCCGGGCGAGAGTCTCACCTGCATTCTGGGATCGTGTGTCGCGGCGTGCGT
CCACGACCCGGCCCTGCGCATCGGGGGTATGAACCACTTCCTTCTCCCCGGCCGCGACCCGCATGACACCGGAAGCGTTC
GCTATGGCGCGCGCAGCATGGAAGCATTGATCGACGCGTTGCTGCACAAGGGCGCGGATCGGCAGCGGCTGAACGTCTGG
CTGTTTGGCGGGGCCAATGTTCTGGGAACACAGACCGGCATCGGCGCGGCCAACAGCGCGTTCGCGGTGGACTTCACCCG
GGCGCAGGGGCTCACCCTGCGTGGCAGCGATCTTGGCGGCACGCGCGGGCGGCGCGTCCACTTCACCCCGGCCACGGGGG
ACCCGCGGGTCGACTACATGCAGAGCGATGGGATTGACGACCCGATCGCCGGGCCGTTGGGCGCGCCGGGGGTTGAGCTT
TTTTGA

Upstream 100 bases:

>100_bases
TACAGAAAATTTCCAAGGCGATCTTGGCCGCCGCCACAGCCCATGAGGACGCCAGCAGTTGACCCATCTGAGATCAAGGT
CGGGGAACGTCACGCATGTC

Downstream 100 bases:

>100_bases
CGTTTTCCCTTTGATCTGCGGCAACCAAGGTCCTATGTCCGGATTGCGCGGGGCAGGAGGTCTCGCCGCGACGAGGCCAA
TCTGTTCCGGACTCGTTGAG

Product: CheD, stimulates methylation of MCP proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MQGQLYISQTPGESLTCILGSCVAACVHDPALRIGGMNHFLLPGRDPHDTGSVRYGARSMEALIDALLHKGADRQRLNVW
LFGGANVLGTQTGIGAANSAFAVDFTRAQGLTLRGSDLGGTRGRRVHFTPATGDPRVDYMQSDGIDDPIAGPLGAPGVEL
F

Sequences:

>Translated_161_residues
MQGQLYISQTPGESLTCILGSCVAACVHDPALRIGGMNHFLLPGRDPHDTGSVRYGARSMEALIDALLHKGADRQRLNVW
LFGGANVLGTQTGIGAANSAFAVDFTRAQGLTLRGSDLGGTRGRRVHFTPATGDPRVDYMQSDGIDDPIAGPLGAPGVEL
F
>Mature_161_residues
MQGQLYISQTPGESLTCILGSCVAACVHDPALRIGGMNHFLLPGRDPHDTGSVRYGARSMEALIDALLHKGADRQRLNVW
LFGGANVLGTQTGIGAANSAFAVDFTRAQGLTLRGSDLGGTRGRRVHFTPATGDPRVDYMQSDGIDDPIAGPLGAPGVEL
F

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED_JANSC (Q28NF0)

Other databases:

- EMBL:   CP000264
- RefSeq:   YP_510787.1
- HSSP:   Q9X005
- ProteinModelPortal:   Q28NF0
- SMR:   Q28NF0
- STRING:   Q28NF0
- GeneID:   3935311
- GenomeReviews:   CP000264_GR
- KEGG:   jan:Jann_2845
- eggNOG:   COG1871
- HOGENOM:   HBG531149
- BioCyc:   JSP290400:JANN_2845-MONOMER
- GO:   GO:0006935
- HAMAP:   MF_01440
- InterPro:   IPR005659

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 16917; Mature: 16917

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGQLYISQTPGESLTCILGSCVAACVHDPALRIGGMNHFLLPGRDPHDTGSVRYGARSM
CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCEEECCCCCCCCCCCEEECHHHH
EALIDALLHKGADRQRLNVWLFGGANVLGTQTGIGAANSAFAVDFTRAQGLTLRGSDLGG
HHHHHHHHHCCCCCCEEEEEEEECCCEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCC
TRGRRVHFTPATGDPRVDYMQSDGIDDPIAGPLGAPGVELF
CCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQGQLYISQTPGESLTCILGSCVAACVHDPALRIGGMNHFLLPGRDPHDTGSVRYGARSM
CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCEEECCCCCCCCCCCEEECHHHH
EALIDALLHKGADRQRLNVWLFGGANVLGTQTGIGAANSAFAVDFTRAQGLTLRGSDLGG
HHHHHHHHHCCCCCCEEEEEEEECCCEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCC
TRGRRVHFTPATGDPRVDYMQSDGIDDPIAGPLGAPGVELF
CCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA