| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is cheY [H]
Identifier: 89055333
GI number: 89055333
Start: 2859727
End: 2860107
Strand: Reverse
Name: cheY [H]
Synonym: Jann_2842
Alternate gene names: 89055333
Gene position: 2860107-2859727 (Counterclockwise)
Preceding gene: 89055334
Following gene: 89055332
Centisome position: 66.24
GC content: 62.47
Gene sequence:
>381_bases ATGAGCCTCTCGGTCCTGGCCATTGACGATTCCCGAACCATGCGGAACCTGCTGAGCGCAGCCTTGGGCCGCGTCGGCTA CGACATCGACCTTGCCGAAGACGGCAGCGAGGGGTTGGACCGGTTCAACAAGACCGACCCCGATGTGGTGATTACCGATA TCAACATGCCGAACCTTGATGGGTTCGGGTTCATTGAGGCGGCGCGGAAATTGCCGCGAGACCGATTGGTGCCCATCCTC GTCCTGACAACGGAAACAGCGCCGGAACTGCGCGCGCGCGCCCGAAAGGCCGGCGCGACCGGTTGGATCGTGAAGCCGTT CGACGATGAAAAGCTCGTCTGGGCGATCGAGCGTGTGGCCAATACCGGAGGCGCGGCATGA
Upstream 100 bases:
>100_bases CGCTTAGTCAGGCCTTCGTGGCATCAGTAGAAGGGCTTGGCGTGTCCCTGCAGGATATCAATGCAACCGATACAGGCCTT GCAGCCGGGGAGGGCCGCGC
Downstream 100 bases:
>100_bases CGGTCGGCGGATCAGACGAGTTTCGCGCCTCCTTTTTCGAGGAATGCGAAGAGCTGCTGGAAGCCATGCATGATGGCTTC GGCCTCATGGTGAATGGCGA
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSLSVLAIDDSRTMRNLLSAALGRVGYDIDLAEDGSEGLDRFNKTDPDVVITDINMPNLDGFGFIEAARKLPRDRLVPIL VLTTETAPELRARARKAGATGWIVKPFDDEKLVWAIERVANTGGAA
Sequences:
>Translated_126_residues MSLSVLAIDDSRTMRNLLSAALGRVGYDIDLAEDGSEGLDRFNKTDPDVVITDINMPNLDGFGFIEAARKLPRDRLVPIL VLTTETAPELRARARKAGATGWIVKPFDDEKLVWAIERVANTGGAA >Mature_125_residues SLSVLAIDDSRTMRNLLSAALGRVGYDIDLAEDGSEGLDRFNKTDPDVVITDINMPNLDGFGFIEAARKLPRDRLVPILV LTTETAPELRARARKAGATGWIVKPFDDEKLVWAIERVANTGGAA
Specific function: Putative member of a two-component regulatory system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=122, Percent_Identity=34.4262295081967, Blast_Score=72, Evalue=1e-14, Organism=Escherichia coli, GI1788550, Length=114, Percent_Identity=30.7017543859649, Blast_Score=70, Evalue=4e-14, Organism=Escherichia coli, GI145693157, Length=104, Percent_Identity=31.7307692307692, Blast_Score=66, Evalue=7e-13, Organism=Escherichia coli, GI1790299, Length=114, Percent_Identity=29.8245614035088, Blast_Score=65, Evalue=1e-12, Organism=Escherichia coli, GI1788713, Length=106, Percent_Identity=38.6792452830189, Blast_Score=64, Evalue=3e-12, Organism=Escherichia coli, GI1787375, Length=126, Percent_Identity=30.1587301587302, Blast_Score=64, Evalue=4e-12, Organism=Escherichia coli, GI1789149, Length=112, Percent_Identity=25, Blast_Score=63, Evalue=5e-12, Organism=Escherichia coli, GI1790437, Length=117, Percent_Identity=27.3504273504274, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI1786599, Length=119, Percent_Identity=28.5714285714286, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI87082012, Length=111, Percent_Identity=29.7297297297297, Blast_Score=60, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13711; Mature: 13580
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSVLAIDDSRTMRNLLSAALGRVGYDIDLAEDGSEGLDRFNKTDPDVVITDINMPNLD CCEEEEEECCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHCCCCCCCEEEEECCCCCCC GFGFIEAARKLPRDRLVPILVLTTETAPELRARARKAGATGWIVKPFDDEKLVWAIERVA CCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHH NTGGAA HCCCCC >Mature Secondary Structure SLSVLAIDDSRTMRNLLSAALGRVGYDIDLAEDGSEGLDRFNKTDPDVVITDINMPNLD CEEEEEECCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHCCCCCCCEEEEECCCCCCC GFGFIEAARKLPRDRLVPILVLTTETAPELRARARKAGATGWIVKPFDDEKLVWAIERVA CCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHH NTGGAA HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA