| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is cheW [H]
Identifier: 89055331
GI number: 89055331
Start: 2857030
End: 2857497
Strand: Reverse
Name: cheW [H]
Synonym: Jann_2840
Alternate gene names: 89055331
Gene position: 2857497-2857030 (Counterclockwise)
Preceding gene: 89055332
Following gene: 89055330
Centisome position: 66.18
GC content: 58.55
Gene sequence:
>468_bases ATGTCGCAAGTTGAAACTGACCAGCACGCCAAGCACCACGAGGTCGTCGCGTTTCGCGTGGCCGAGCAAGATTTTTGTTT CGACATCATGTCCGTGCGCGAGATCAGAGGATGGACCGAAACGACGACGCTGCCCCACGCCCAGAGCTATGTGAAAGGCG TGATCAATCTGCGCGGCTCGGTTGTGCCGGTTGTCGACCTGTCGGACCGCCTGGGCTTTGGTCCAACGCAGGCCTGCGCC CGGCACGTGATCATCATCACGGTTGTGGAGGGCCAGACGATTGGCCTTCTGGCCGATGTCGTGTCCGATATCCTCGCAGT GTCTGATGATAGTATGCACCCGGTCCCGGACATGGTGTCAGATCAGGTGAAGTCTTTTATCTCGGGCGTCGTGTTGATCG ATGAACGGATGATCCGCCGGTTGGACCTGTCCAGCGTCGTCCCGAAGACGACGTTGGAAGCTGCATGA
Upstream 100 bases:
>100_bases GCGCTGATCGTTGACCCGGAGGATATCGCCGGAGGCATTGCGCTACCCCAATCCTGCCAGACCTCTGCCCCCGACCTGAT CGCTTCAGAAGGAGACCAAC
Downstream 100 bases:
>100_bases ATGGACCACATATGATCCCTGCCGTCGGTCAAGCCAATGGCCAGACGATTGGCGACGCCGCCTTTCGGACTGTCGCGCGC CACCTGCAGGAGCAGACCGG
Product: CheW protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSQVETDQHAKHHEVVAFRVAEQDFCFDIMSVREIRGWTETTTLPHAQSYVKGVINLRGSVVPVVDLSDRLGFGPTQACA RHVIIITVVEGQTIGLLADVVSDILAVSDDSMHPVPDMVSDQVKSFISGVVLIDERMIRRLDLSSVVPKTTLEAA
Sequences:
>Translated_155_residues MSQVETDQHAKHHEVVAFRVAEQDFCFDIMSVREIRGWTETTTLPHAQSYVKGVINLRGSVVPVVDLSDRLGFGPTQACA RHVIIITVVEGQTIGLLADVVSDILAVSDDSMHPVPDMVSDQVKSFISGVVLIDERMIRRLDLSSVVPKTTLEAA >Mature_154_residues SQVETDQHAKHHEVVAFRVAEQDFCFDIMSVREIRGWTETTTLPHAQSYVKGVINLRGSVVPVVDLSDRLGFGPTQACAR HVIIITVVEGQTIGLLADVVSDILAVSDDSMHPVPDMVSDQVKSFISGVVLIDERMIRRLDLSSVVPKTTLEAA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=126, Percent_Identity=27.7777777777778, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 17009; Mature: 16878
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVETDQHAKHHEVVAFRVAEQDFCFDIMSVREIRGWTETTTLPHAQSYVKGVINLRGS CCCCCCCCCCCHHHEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC VVPVVDLSDRLGFGPTQACARHVIIITVVEGQTIGLLADVVSDILAVSDDSMHPVPDMVS EEEEEECCCCCCCCHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH DQVKSFISGVVLIDERMIRRLDLSSVVPKTTLEAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure SQVETDQHAKHHEVVAFRVAEQDFCFDIMSVREIRGWTETTTLPHAQSYVKGVINLRGS CCCCCCCCCCHHHEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC VVPVVDLSDRLGFGPTQACARHVIIITVVEGQTIGLLADVVSDILAVSDDSMHPVPDMVS EEEEEECCCCCCCCHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH DQVKSFISGVVLIDERMIRRLDLSSVVPKTTLEAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7494484 [H]