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The map label for this gene is ydfG [C]

Identifier: 89055323

GI number: 89055323

Start: 2849080

End: 2849814

Strand: Direct

Name: ydfG [C]

Synonym: Jann_2832

Alternate gene names: 89055323

Gene position: 2849080-2849814 (Clockwise)

Preceding gene: 89055322

Following gene: 89055324

Centisome position: 65.98

GC content: 65.17

Gene sequence:

>735_bases
ATGAGCGGCCCGGTCCTGATCCTTGGCGCGAAATCGGACATCGCGCGCGCCGTGGCACGGTCCTTCGCCGAAGCCGGTCA
CCCGATCCAGCTGGCCGCCCGCGATGTGGCGCGCCTAGAAGACGACGCCGCAGATCTGCGCACCCGCTTCGGCGTCGAGG
TCACGCTGCACGACTTCGACGCGTTAACCATCGAATCACATGGAGACTTCGTCACAGGCCTCCCCGCCCTGCCCGAGGTC
GCCGTCTGTGCCGTCGGCGCGATGGGCACCCAGGAGGGCAGCGAAGCCGACCCAATGGCCGCCGCCCACGTCATGCGGTC
CAATTTTGAGGGGCCCGCATCCGTGATGGCGCATCTGGCCAACGCGATGGAGGCGCGCGGATCGGGCACGTTGGTGGGCA
TCTCATCGGTCGCAGGCGATCGGGGTCGCGCCTCCAACTATGTCTATGGATCGGCGAAGGCGGGCTTCACCGCGTTCCTG
TCCGGCCTGCGCAATCGCCTTGCAAAAAAGGGCGTACACGTCATCACCGTGCTGCCGGGCTTTGTCAAAACCGCGATGAC
AGAGGGCATGGACACGCCCGGTCCGCTGACTGCCGAGCCGGAGGAGGTGGGAGCGGCGATCCTGAACGCGGTGAAGAAAG
GGACAAACGTGATCTACACGCGGTCCATCTGGCGCATCGTCATGGCGGTGATCCGGAATATCCCCGAGCCGATCTTCAAG
AAGACCTCCATCTGA

Upstream 100 bases:

>100_bases
TCGTCAAAGCCGATGCGCGGGCGGAGGCTTTTGCCGCAATGCGCACGCAGATGGGCCTGCGGGACCGGTTCGCCTCGGAG
CAGTCTGAAAGGTTGGGGTT

Downstream 100 bases:

>100_bases
CGACCGGCGTGGCTGCCCGCTGGCGAGATTCCGCGCAAAAAGCAAGCGCAGGATGAAACTGGTGAACACGTTGTTGCGAA
TTTAACACTTCCAGACTAGG

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSGPVLILGAKSDIARAVARSFAEAGHPIQLAARDVARLEDDAADLRTRFGVEVTLHDFDALTIESHGDFVTGLPALPEV
AVCAVGAMGTQEGSEADPMAAAHVMRSNFEGPASVMAHLANAMEARGSGTLVGISSVAGDRGRASNYVYGSAKAGFTAFL
SGLRNRLAKKGVHVITVLPGFVKTAMTEGMDTPGPLTAEPEEVGAAILNAVKKGTNVIYTRSIWRIVMAVIRNIPEPIFK
KTSI

Sequences:

>Translated_244_residues
MSGPVLILGAKSDIARAVARSFAEAGHPIQLAARDVARLEDDAADLRTRFGVEVTLHDFDALTIESHGDFVTGLPALPEV
AVCAVGAMGTQEGSEADPMAAAHVMRSNFEGPASVMAHLANAMEARGSGTLVGISSVAGDRGRASNYVYGSAKAGFTAFL
SGLRNRLAKKGVHVITVLPGFVKTAMTEGMDTPGPLTAEPEEVGAAILNAVKKGTNVIYTRSIWRIVMAVIRNIPEPIFK
KTSI
>Mature_243_residues
SGPVLILGAKSDIARAVARSFAEAGHPIQLAARDVARLEDDAADLRTRFGVEVTLHDFDALTIESHGDFVTGLPALPEVA
VCAVGAMGTQEGSEADPMAAAHVMRSNFEGPASVMAHLANAMEARGSGTLVGISSVAGDRGRASNYVYGSAKAGFTAFLS
GLRNRLAKKGVHVITVLPGFVKTAMTEGMDTPGPLTAEPEEVGAAILNAVKKGTNVIYTRSIWRIVMAVIRNIPEPIFKK
TSI

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Drosophila melanogaster, GI21358495, Length=192, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25526; Mature: 25394

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPVLILGAKSDIARAVARSFAEAGHPIQLAARDVARLEDDAADLRTRFGVEVTLHDFD
CCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
ALTIESHGDFVTGLPALPEVAVCAVGAMGTQEGSEADPMAAAHVMRSNFEGPASVMAHLA
EEEEECCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
NAMEARGSGTLVGISSVAGDRGRASNYVYGSAKAGFTAFLSGLRNRLAKKGVHVITVLPG
HHHHCCCCCCEEEHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECHH
FVKTAMTEGMDTPGPLTAEPEEVGAAILNAVKKGTNVIYTRSIWRIVMAVIRNIPEPIFK
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCHHHHH
KTSI
CCCC
>Mature Secondary Structure 
SGPVLILGAKSDIARAVARSFAEAGHPIQLAARDVARLEDDAADLRTRFGVEVTLHDFD
CCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
ALTIESHGDFVTGLPALPEVAVCAVGAMGTQEGSEADPMAAAHVMRSNFEGPASVMAHLA
EEEEECCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
NAMEARGSGTLVGISSVAGDRGRASNYVYGSAKAGFTAFLSGLRNRLAKKGVHVITVLPG
HHHHCCCCCCEEEHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECHH
FVKTAMTEGMDTPGPLTAEPEEVGAAILNAVKKGTNVIYTRSIWRIVMAVIRNIPEPIFK
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCHHHHH
KTSI
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]