Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055324

Identifier: 89055324

GI number: 89055324

Start: 2849987

End: 2851513

Strand: Direct

Name: 89055324

Synonym: Jann_2833

Alternate gene names: NA

Gene position: 2849987-2851513 (Clockwise)

Preceding gene: 89055323

Following gene: 89055327

Centisome position: 66.0

GC content: 67.13

Gene sequence:

>1527_bases
ATGAACGGGACAGCACTCGCGCGGGCTTTTGCGCGGACGAAACAGGTCGACATCAAGGGCAGTCTTGCGGCGTTTGAACA
GCCAAACGGCGTGCTGGCTGTTGTCCTTGCCTCGACACTTATCACCTCGGTCTGTGCATTTGTCGTCGTCAGCAATGCGC
TTGGCGCTCAGCGCCCCGCGGCCCAGGACGTTGCGACCGAGGTCCCCGCGATGGAGGCCACCGTGCAGCGTCGCTATCCC
GGTGCCACAGCCTTTGACACCACCGTGTCGGTCGTGATCGATCGCGCGCCAAGCATTCGTGTCGCGCCGCAAATGGCCCC
GGTGGCCGACACGCGGCCGACGCCGGCGGAGCCCGCGCACCCCTACAGCATTGTCGAAGGACGCCCGCCCGTCATGCCGC
AGCCTCGGCCCGGCGTCGTGACCGTCCCCCAGATCGTGCAGGTCGTCAGCCTGGCCCGCAATCTGGATGCAGACCGCGCC
CTGGCCCTGCCGCGCCCAGTCGCCCGCCCCGGCGCCACCACAACACCCGCCTGGCCCGATGTTGAGACTGGCCCGCAAAC
CTCCACCCTGCTGGCCGCCGTCAGCCCACGCCCCAGCCTGCGTCCGGCGGATCTGGTGACCCGTGTCGCTGCAAGGCCCG
ATGAGCTTGATATTGAGGTCGCCCGCGCCGAGGCGCCCGGTGCCATTGGCGGTGTCGGCGAAAGCCCGCGCCCCAGCATC
TTCAGCGGCGGCGGCAGCGGCGATTGCTCTCCGCGCATGGCACGCGAAATTCCGCGCCGCCCCGGATCTGCCGCCAGCGG
GTCTGCGGTCATGGCGAGTGTCGGAAACGGCTCCGGCTCGGGCCGCGACAACCGCCTGGTGCAGGAAGCGCTGTCCGGGA
ATATCCCCAGCCATATCCGCGACTTGCAGCCTGTGAGCTTCAACGGCACCGTGGGTGGGCGCACGGTTGAGGTGACAATC
TGCGTGACGCCGGATTATCTCGCCATCGGCTCGGACCGCGACAATGTTCTGGTGCCCCTTGGCCTGCCCGCAGCGCTCCG
TGTGGCCGATGCCTTTGACATGATGCTGCCCACGACGACGATGGTCGACGCGATCTACCAGCAGGCCGATGTGCGCGTGG
CGCCTTCGCCGATGACACCCGGATCATCCATGTCGTCGACGAACTACTTCGTTCGTCACAATGAAACCGTTCAGGCCCAG
TTTGCCCGCGCCGGTGCGCGCGATGGCATGTTGGTGGCGGGGCACAAGAAGGACCTGGTGCTGGCCAACCGCCTGTCGCG
CAATCCGGGCCGGGTCGCGATCTATGGCTGGCACCGCACCAACGGGCGCGCGATCCAGCCGCTCTCCACCGTCCATGGGG
AGTATTACGCCGATTATTCCCACGGTATCCGTCTGGTCAGCCGCACAGCCTTCATCAATGGCCGCGCTGTTGACCTGCGG
GAGCTGTTGACGGATGAGCGTTACGCCGGGTTCCTGAATTCCGACGGGGCCCTGACGGGTGCGACGGTGCGGCTCGCCTC
CCTCTAA

Upstream 100 bases:

>100_bases
GTTGCGAATTTAACACTTCCAGACTAGGGCTGGAAGCTCACAAGGGACATGCGACACGCGGCGGACAGGCTGCGGTCAAC
GATTTGGGCAGTGATAGACG

Downstream 100 bases:

>100_bases
GCCACGGATTTGGAAATGAAAAAGGCGCGCCCGGTGTGGCGCGCCTTTTGTTTTGTCAGGACCAGATTATCGGACGTCTC
GGAAACACCGGAAGCCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MNGTALARAFARTKQVDIKGSLAAFEQPNGVLAVVLASTLITSVCAFVVVSNALGAQRPAAQDVATEVPAMEATVQRRYP
GATAFDTTVSVVIDRAPSIRVAPQMAPVADTRPTPAEPAHPYSIVEGRPPVMPQPRPGVVTVPQIVQVVSLARNLDADRA
LALPRPVARPGATTTPAWPDVETGPQTSTLLAAVSPRPSLRPADLVTRVAARPDELDIEVARAEAPGAIGGVGESPRPSI
FSGGGSGDCSPRMAREIPRRPGSAASGSAVMASVGNGSGSGRDNRLVQEALSGNIPSHIRDLQPVSFNGTVGGRTVEVTI
CVTPDYLAIGSDRDNVLVPLGLPAALRVADAFDMMLPTTTMVDAIYQQADVRVAPSPMTPGSSMSSTNYFVRHNETVQAQ
FARAGARDGMLVAGHKKDLVLANRLSRNPGRVAIYGWHRTNGRAIQPLSTVHGEYYADYSHGIRLVSRTAFINGRAVDLR
ELLTDERYAGFLNSDGALTGATVRLASL

Sequences:

>Translated_508_residues
MNGTALARAFARTKQVDIKGSLAAFEQPNGVLAVVLASTLITSVCAFVVVSNALGAQRPAAQDVATEVPAMEATVQRRYP
GATAFDTTVSVVIDRAPSIRVAPQMAPVADTRPTPAEPAHPYSIVEGRPPVMPQPRPGVVTVPQIVQVVSLARNLDADRA
LALPRPVARPGATTTPAWPDVETGPQTSTLLAAVSPRPSLRPADLVTRVAARPDELDIEVARAEAPGAIGGVGESPRPSI
FSGGGSGDCSPRMAREIPRRPGSAASGSAVMASVGNGSGSGRDNRLVQEALSGNIPSHIRDLQPVSFNGTVGGRTVEVTI
CVTPDYLAIGSDRDNVLVPLGLPAALRVADAFDMMLPTTTMVDAIYQQADVRVAPSPMTPGSSMSSTNYFVRHNETVQAQ
FARAGARDGMLVAGHKKDLVLANRLSRNPGRVAIYGWHRTNGRAIQPLSTVHGEYYADYSHGIRLVSRTAFINGRAVDLR
ELLTDERYAGFLNSDGALTGATVRLASL
>Mature_508_residues
MNGTALARAFARTKQVDIKGSLAAFEQPNGVLAVVLASTLITSVCAFVVVSNALGAQRPAAQDVATEVPAMEATVQRRYP
GATAFDTTVSVVIDRAPSIRVAPQMAPVADTRPTPAEPAHPYSIVEGRPPVMPQPRPGVVTVPQIVQVVSLARNLDADRA
LALPRPVARPGATTTPAWPDVETGPQTSTLLAAVSPRPSLRPADLVTRVAARPDELDIEVARAEAPGAIGGVGESPRPSI
FSGGGSGDCSPRMAREIPRRPGSAASGSAVMASVGNGSGSGRDNRLVQEALSGNIPSHIRDLQPVSFNGTVGGRTVEVTI
CVTPDYLAIGSDRDNVLVPLGLPAALRVADAFDMMLPTTTMVDAIYQQADVRVAPSPMTPGSSMSSTNYFVRHNETVQAQ
FARAGARDGMLVAGHKKDLVLANRLSRNPGRVAIYGWHRTNGRAIQPLSTVHGEYYADYSHGIRLVSRTAFINGRAVDLR
ELLTDERYAGFLNSDGALTGATVRLASL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53357; Mature: 53357

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGTALARAFARTKQVDIKGSLAAFEQPNGVLAVVLASTLITSVCAFVVVSNALGAQRPA
CCCHHHHHHHHHHHEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AQDVATEVPAMEATVQRRYPGATAFDTTVSVVIDRAPSIRVAPQMAPVADTRPTPAEPAH
HHHHHHHCCHHHHHHHHCCCCCCHHHCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCC
PYSIVEGRPPVMPQPRPGVVTVPQIVQVVSLARNLDADRALALPRPVARPGATTTPAWPD
CCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCC
VETGPQTSTLLAAVSPRPSLRPADLVTRVAARPDELDIEVARAEAPGAIGGVGESPRPSI
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCE
FSGGGSGDCSPRMAREIPRRPGSAASGSAVMASVGNGSGSGRDNRLVQEALSGNIPSHIR
EECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHH
DLQPVSFNGTVGGRTVEVTICVTPDYLAIGSDRDNVLVPLGLPAALRVADAFDMMLPTTT
CCCCCEECCCCCCEEEEEEEEECCCEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCHHH
MVDAIYQQADVRVAPSPMTPGSSMSSTNYFVRHNETVQAQFARAGARDGMLVAGHKKDLV
HHHHHHHHCCCEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCEEEECCCCCCH
LANRLSRNPGRVAIYGWHRTNGRAIQPLSTVHGEYYADYSHGIRLVSRTAFINGRAVDLR
HHHHHCCCCCEEEEEEEECCCCCEECCHHHHCCCCEECHHHCEEEEEEEEEECCCCCHHH
ELLTDERYAGFLNSDGALTGATVRLASL
HHHCCHHHCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MNGTALARAFARTKQVDIKGSLAAFEQPNGVLAVVLASTLITSVCAFVVVSNALGAQRPA
CCCHHHHHHHHHHHEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AQDVATEVPAMEATVQRRYPGATAFDTTVSVVIDRAPSIRVAPQMAPVADTRPTPAEPAH
HHHHHHHCCHHHHHHHHCCCCCCHHHCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCC
PYSIVEGRPPVMPQPRPGVVTVPQIVQVVSLARNLDADRALALPRPVARPGATTTPAWPD
CCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCC
VETGPQTSTLLAAVSPRPSLRPADLVTRVAARPDELDIEVARAEAPGAIGGVGESPRPSI
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCE
FSGGGSGDCSPRMAREIPRRPGSAASGSAVMASVGNGSGSGRDNRLVQEALSGNIPSHIR
EECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHH
DLQPVSFNGTVGGRTVEVTICVTPDYLAIGSDRDNVLVPLGLPAALRVADAFDMMLPTTT
CCCCCEECCCCCCEEEEEEEEECCCEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCHHH
MVDAIYQQADVRVAPSPMTPGSSMSSTNYFVRHNETVQAQFARAGARDGMLVAGHKKDLV
HHHHHHHHCCCEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCEEEECCCCCCH
LANRLSRNPGRVAIYGWHRTNGRAIQPLSTVHGEYYADYSHGIRLVSRTAFINGRAVDLR
HHHHHCCCCCEEEEEEEECCCCCEECCHHHHCCCCEECHHHCEEEEEEEEEECCCCCHHH
ELLTDERYAGFLNSDGALTGATVRLASL
HHHCCHHHCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA