| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89055278
Identifier: 89055278
GI number: 89055278
Start: 2805719
End: 2806477
Strand: Reverse
Name: 89055278
Synonym: Jann_2787
Alternate gene names: NA
Gene position: 2806477-2805719 (Counterclockwise)
Preceding gene: 89055282
Following gene: 89055277
Centisome position: 65.0
GC content: 58.5
Gene sequence:
>759_bases ATGCCGGCTTTCAAATCATATGTGATCTGCACCAGCCCCCGCAGCGGCAGCACATTGTTGTGCAGGCTTTTGCAGGACGC CGGGATCGCGGGATGTCCGGATTCGCATTTCCACGCGCCGTCTGTGGACGCTTGGTGCGGCTATTACGGCCTAAGCGCGG AGAGGTTCGACAGCCGACACGCGTTGCTGGATGCCATTGTCAACGCAGCACAGGCGCGGGGTAAGGGTAGGAGTGATGTC TTTGGTTTGCGTATGCAGCGCCAAAGCATCGGCTTTTTTCTACAGCAACTGGGTCTTCTCTACCCATCGCTCACGAATGA CAAATCCCGCATCGAGGCTGCGTTTGGGCGCACGTTGTTTATTTATCTGACCCGTGAAGACAAACTTGATCAGGCCATAT CTTACGTGAAGGCGAAGCAGTCAGGTTTATGGCACATGGCCGCCGATGGGACGGAGTTGGAGCGGCTGTCTGACCCCAGA GACCCGACCTATGACGCGCGGGCGATTGCGTCTCAACTGGCGCTGGCCGAGCAGATGGAACGGGAGTGGGAGGATTGGTT CAAGGTCGAGCAGATTGAGCCGCTGCGCGTAACCTATGACGCATTGTCTGCGGCCCCTTCTGCCACCCGCGATCTTGTCC TGCGCGCGCTGTGGTTGGACATGAGGACATTGAAGGACGGACCGCCGCCCACGGCGAAATTGGCCGATGTGACCAGCAGA GATTGGGCAGACCGGTTTCGACGGGATCATTCGGGCTGA
Upstream 100 bases:
>100_bases TAGGGGGCAGATCAAGGGCAGGGAAGGGCGGAGTAGAGCCGGTGCACTTTGACCGTTTCCGCCGTGGTTTATGGGTCCCG CCTCGTGTAGGGCGGGGGGG
Downstream 100 bases:
>100_bases TCTGGACGCGCCGCCCCAAAAACGACGAAGGGCCGCCGATGAAGGCGACCCTGTCGAAAACCACTGGGGCAGAAGTGGTT CAAATTGGAGCGGGCGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Stf0 Sulphotransferase; Stf0 Sulphotransferase Superfamily
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MPAFKSYVICTSPRSGSTLLCRLLQDAGIAGCPDSHFHAPSVDAWCGYYGLSAERFDSRHALLDAIVNAAQARGKGRSDV FGLRMQRQSIGFFLQQLGLLYPSLTNDKSRIEAAFGRTLFIYLTREDKLDQAISYVKAKQSGLWHMAADGTELERLSDPR DPTYDARAIASQLALAEQMEREWEDWFKVEQIEPLRVTYDALSAAPSATRDLVLRALWLDMRTLKDGPPPTAKLADVTSR DWADRFRRDHSG
Sequences:
>Translated_252_residues MPAFKSYVICTSPRSGSTLLCRLLQDAGIAGCPDSHFHAPSVDAWCGYYGLSAERFDSRHALLDAIVNAAQARGKGRSDV FGLRMQRQSIGFFLQQLGLLYPSLTNDKSRIEAAFGRTLFIYLTREDKLDQAISYVKAKQSGLWHMAADGTELERLSDPR DPTYDARAIASQLALAEQMEREWEDWFKVEQIEPLRVTYDALSAAPSATRDLVLRALWLDMRTLKDGPPPTAKLADVTSR DWADRFRRDHSG >Mature_251_residues PAFKSYVICTSPRSGSTLLCRLLQDAGIAGCPDSHFHAPSVDAWCGYYGLSAERFDSRHALLDAIVNAAQARGKGRSDVF GLRMQRQSIGFFLQQLGLLYPSLTNDKSRIEAAFGRTLFIYLTREDKLDQAISYVKAKQSGLWHMAADGTELERLSDPRD PTYDARAIASQLALAEQMEREWEDWFKVEQIEPLRVTYDALSAAPSATRDLVLRALWLDMRTLKDGPPPTAKLADVTSRD WADRFRRDHSG
Specific function: Unknown
COG id: COG4424
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28303; Mature: 28172
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAFKSYVICTSPRSGSTLLCRLLQDAGIAGCPDSHFHAPSVDAWCGYYGLSAERFDSRH CCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHH ALLDAIVNAAQARGKGRSDVFGLRMQRQSIGFFLQQLGLLYPSLTNDKSRIEAAFGRTLF HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEE IYLTREDKLDQAISYVKAKQSGLWHMAADGTELERLSDPRDPTYDARAIASQLALAEQME EEEECCHHHHHHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH REWEDWFKVEQIEPLRVTYDALSAAPSATRDLVLRALWLDMRTLKDGPPPTAKLADVTSR HHHHHHHHHCCCCCHHEEHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH DWADRFRRDHSG HHHHHHHHCCCC >Mature Secondary Structure PAFKSYVICTSPRSGSTLLCRLLQDAGIAGCPDSHFHAPSVDAWCGYYGLSAERFDSRH CCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHH ALLDAIVNAAQARGKGRSDVFGLRMQRQSIGFFLQQLGLLYPSLTNDKSRIEAAFGRTLF HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEE IYLTREDKLDQAISYVKAKQSGLWHMAADGTELERLSDPRDPTYDARAIASQLALAEQME EEEECCHHHHHHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH REWEDWFKVEQIEPLRVTYDALSAAPSATRDLVLRALWLDMRTLKDGPPPTAKLADVTSR HHHHHHHHHCCCCCHHEEHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH DWADRFRRDHSG HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA