Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055282

Identifier: 89055282

GI number: 89055282

Start: 2808517

End: 2808906

Strand: Reverse

Name: 89055282

Synonym: Jann_2791

Alternate gene names: NA

Gene position: 2808906-2808517 (Counterclockwise)

Preceding gene: 89055285

Following gene: 89055278

Centisome position: 65.05

GC content: 60.26

Gene sequence:

>390_bases
ATGAAAAAGACCCTGTTGGGCGCGTGCATCGCAACATTGGGCATGGCGGGCGCAGCCCTTGCCGATGCATCCCACGGCAT
CTGGCAGACGGAGGTGGATGACGGCGCGTATGCCTACGTCACGCTTGCGGCCTGTGGAAATGCCGTATGTGGAACGATTA
GCCGGACCTTCAATTCGTCGGGTGAGTACCAGTCCGAGAATATCGGGCGGCAGATTGTCATCGACATGGTGCCCAACGGC
GATGGCACCTATGAGGGTTCGGTCTGGCGGCCATCCAACGGTCGTATCTACATCGGTCGGATGAGCCTGAGCGGCAATGC
TATTACTCTGCGCGGCTGCGTGGCGGGCGGGTTGATCTGCGCGCGTCAGAATTGGGTGCGCGTGCAGTAA

Upstream 100 bases:

>100_bases
CCCAAGGCAGCGCAAGGGTCAGCCGCCGCCACGTCACGCTTGCCTTGCGCCGCCGCTTCGCGCCACCGTTCGCCGCACAA
AGATTTGGGAGGATCATCAT

Downstream 100 bases:

>100_bases
GTACCAGAAATTCAATTAAAAAGGGCGCGTCCCATCGGGCGCGCCCTTTGTGCTTGGCAAGGTATTCGTCAACTGGTCGG
GAAGTCCTGCCACTGGGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKKTLLGACIATLGMAGAALADASHGIWQTEVDDGAYAYVTLAACGNAVCGTISRTFNSSGEYQSENIGRQIVIDMVPNG
DGTYEGSVWRPSNGRIYIGRMSLSGNAITLRGCVAGGLICARQNWVRVQ

Sequences:

>Translated_129_residues
MKKTLLGACIATLGMAGAALADASHGIWQTEVDDGAYAYVTLAACGNAVCGTISRTFNSSGEYQSENIGRQIVIDMVPNG
DGTYEGSVWRPSNGRIYIGRMSLSGNAITLRGCVAGGLICARQNWVRVQ
>Mature_129_residues
MKKTLLGACIATLGMAGAALADASHGIWQTEVDDGAYAYVTLAACGNAVCGTISRTFNSSGEYQSENIGRQIVIDMVPNG
DGTYEGSVWRPSNGRIYIGRMSLSGNAITLRGCVAGGLICARQNWVRVQ

Specific function: Unknown

COG id: COG4731

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13564; Mature: 13564

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLLGACIATLGMAGAALADASHGIWQTEVDDGAYAYVTLAACGNAVCGTISRTFNSS
CCCHHHHHHHHHHCCCCHHHCCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHCCCC
GEYQSENIGRQIVIDMVPNGDGTYEGSVWRPSNGRIYIGRMSLSGNAITLRGCVAGGLIC
CCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCEEEEEEEECCCCEEEEEECCCCCEEE
ARQNWVRVQ
ECCCEEEEC
>Mature Secondary Structure
MKKTLLGACIATLGMAGAALADASHGIWQTEVDDGAYAYVTLAACGNAVCGTISRTFNSS
CCCHHHHHHHHHHCCCCHHHCCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHCCCC
GEYQSENIGRQIVIDMVPNGDGTYEGSVWRPSNGRIYIGRMSLSGNAITLRGCVAGGLIC
CCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCEEEEEEEECCCCEEEEEECCCCCEEE
ARQNWVRVQ
ECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA