| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055273
Identifier: 89055273
GI number: 89055273
Start: 2800432
End: 2801010
Strand: Direct
Name: 89055273
Synonym: Jann_2782
Alternate gene names: NA
Gene position: 2800432-2801010 (Clockwise)
Preceding gene: 89055272
Following gene: 89055274
Centisome position: 64.86
GC content: 59.93
Gene sequence:
>579_bases TTGCGCGTCGTGTGCTGCAATCGCAGACAGATCGGACACCCAAGGCAGCGCGGAGCCGCACCAGACCTGCACAGCCGGCG TCAGCTGCGCGCGCTGCCGAATGGTCCCGACGCGCAAACCGAAAAACGCCGAGGGGTCGTTCTTGCTGCATGCGTGAATT CGGGTTCCGCAATTCGGACAGAAACTCAGATATCTTACGCGCCCACTCTGCGCGGTCTTCTCGTACTCGCGGAGCGTTCC CGACAGCAGCCTGAAGCGACCATCCGTGACGCTCACGACCACACCGTAAGCGGCACCGGAATTTATCTGGCAGTCCAGAC AATGACAGATCGCAACTCTCGCTGGATCTATTTCCGCCTCATAGGTGACGTTCCCGCAGAGACAGCCCCCGTCAACTTTC ATACCTATCCCCTGAATACATCACCGGATGACCGACACATTCACTCTGCAATATCACAAAGCGCCAGACAACGCGCAGGG GTGACTCCCCGAGGCAAAACGCATCGTCGACCCGCGGTGCAGGCCGGAGAGACCCGGCAGGCTCTGCCTCAGATCTGCCC CAGGTTTGCCTTGCAGTGA
Upstream 100 bases:
>100_bases AGTCGCCAAGGCGGCGTCCTTCGGCCTGGTCCACAGTTTGAAGGTCAACACGGCGCTGGCACGTTAGACATCCCTCGCGG GCAAGCGGCAGGCGTTACCC
Downstream 100 bases:
>100_bases TCAATCAAGCACCGCTCCGTCGTCCTGCTATCGCCTTGTTTCACGGACTTATCTGACGCCAGACACTTTTTGGGATCCAG CGTAATGATAAATTTAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MRVVCCNRRQIGHPRQRGAAPDLHSRRQLRALPNGPDAQTEKRRGVVLAACVNSGSAIRTETQISYAPTLRGLLVLAERS RQQPEATIRDAHDHTVSGTGIYLAVQTMTDRNSRWIYFRLIGDVPAETAPVNFHTYPLNTSPDDRHIHSAISQSARQRAG VTPRGKTHRRPAVQAGETRQALPQICPRFALQ
Sequences:
>Translated_192_residues MRVVCCNRRQIGHPRQRGAAPDLHSRRQLRALPNGPDAQTEKRRGVVLAACVNSGSAIRTETQISYAPTLRGLLVLAERS RQQPEATIRDAHDHTVSGTGIYLAVQTMTDRNSRWIYFRLIGDVPAETAPVNFHTYPLNTSPDDRHIHSAISQSARQRAG VTPRGKTHRRPAVQAGETRQALPQICPRFALQ >Mature_192_residues MRVVCCNRRQIGHPRQRGAAPDLHSRRQLRALPNGPDAQTEKRRGVVLAACVNSGSAIRTETQISYAPTLRGLLVLAERS RQQPEATIRDAHDHTVSGTGIYLAVQTMTDRNSRWIYFRLIGDVPAETAPVNFHTYPLNTSPDDRHIHSAISQSARQRAG VTPRGKTHRRPAVQAGETRQALPQICPRFALQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21366; Mature: 21366
Theoretical pI: Translated: 11.67; Mature: 11.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVCCNRRQIGHPRQRGAAPDLHSRRQLRALPNGPDAQTEKRRGVVLAACVNSGSAIRT CEEEECCCCCCCCCHHCCCCCCHHHHHHHHCCCCCCCCCCHHHCCEEEEEEECCCCEEEE ETQISYAPTLRGLLVLAERSRQQPEATIRDAHDHTVSGTGIYLAVQTMTDRNSRWIYFRL CCEEEHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEECCCEEEEEEEEEECCCCCEEEEEE IGDVPAETAPVNFHTYPLNTSPDDRHIHSAISQSARQRAGVTPRGKTHRRPAVQAGETRQ ECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH ALPQICPRFALQ HHHHHHHHHCCC >Mature Secondary Structure MRVVCCNRRQIGHPRQRGAAPDLHSRRQLRALPNGPDAQTEKRRGVVLAACVNSGSAIRT CEEEECCCCCCCCCHHCCCCCCHHHHHHHHCCCCCCCCCCHHHCCEEEEEEECCCCEEEE ETQISYAPTLRGLLVLAERSRQQPEATIRDAHDHTVSGTGIYLAVQTMTDRNSRWIYFRL CCEEEHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEECCCEEEEEEEEEECCCCCEEEEEE IGDVPAETAPVNFHTYPLNTSPDDRHIHSAISQSARQRAGVTPRGKTHRRPAVQAGETRQ ECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH ALPQICPRFALQ HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA