Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055273

Identifier: 89055273

GI number: 89055273

Start: 2800432

End: 2801010

Strand: Direct

Name: 89055273

Synonym: Jann_2782

Alternate gene names: NA

Gene position: 2800432-2801010 (Clockwise)

Preceding gene: 89055272

Following gene: 89055274

Centisome position: 64.86

GC content: 59.93

Gene sequence:

>579_bases
TTGCGCGTCGTGTGCTGCAATCGCAGACAGATCGGACACCCAAGGCAGCGCGGAGCCGCACCAGACCTGCACAGCCGGCG
TCAGCTGCGCGCGCTGCCGAATGGTCCCGACGCGCAAACCGAAAAACGCCGAGGGGTCGTTCTTGCTGCATGCGTGAATT
CGGGTTCCGCAATTCGGACAGAAACTCAGATATCTTACGCGCCCACTCTGCGCGGTCTTCTCGTACTCGCGGAGCGTTCC
CGACAGCAGCCTGAAGCGACCATCCGTGACGCTCACGACCACACCGTAAGCGGCACCGGAATTTATCTGGCAGTCCAGAC
AATGACAGATCGCAACTCTCGCTGGATCTATTTCCGCCTCATAGGTGACGTTCCCGCAGAGACAGCCCCCGTCAACTTTC
ATACCTATCCCCTGAATACATCACCGGATGACCGACACATTCACTCTGCAATATCACAAAGCGCCAGACAACGCGCAGGG
GTGACTCCCCGAGGCAAAACGCATCGTCGACCCGCGGTGCAGGCCGGAGAGACCCGGCAGGCTCTGCCTCAGATCTGCCC
CAGGTTTGCCTTGCAGTGA

Upstream 100 bases:

>100_bases
AGTCGCCAAGGCGGCGTCCTTCGGCCTGGTCCACAGTTTGAAGGTCAACACGGCGCTGGCACGTTAGACATCCCTCGCGG
GCAAGCGGCAGGCGTTACCC

Downstream 100 bases:

>100_bases
TCAATCAAGCACCGCTCCGTCGTCCTGCTATCGCCTTGTTTCACGGACTTATCTGACGCCAGACACTTTTTGGGATCCAG
CGTAATGATAAATTTAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MRVVCCNRRQIGHPRQRGAAPDLHSRRQLRALPNGPDAQTEKRRGVVLAACVNSGSAIRTETQISYAPTLRGLLVLAERS
RQQPEATIRDAHDHTVSGTGIYLAVQTMTDRNSRWIYFRLIGDVPAETAPVNFHTYPLNTSPDDRHIHSAISQSARQRAG
VTPRGKTHRRPAVQAGETRQALPQICPRFALQ

Sequences:

>Translated_192_residues
MRVVCCNRRQIGHPRQRGAAPDLHSRRQLRALPNGPDAQTEKRRGVVLAACVNSGSAIRTETQISYAPTLRGLLVLAERS
RQQPEATIRDAHDHTVSGTGIYLAVQTMTDRNSRWIYFRLIGDVPAETAPVNFHTYPLNTSPDDRHIHSAISQSARQRAG
VTPRGKTHRRPAVQAGETRQALPQICPRFALQ
>Mature_192_residues
MRVVCCNRRQIGHPRQRGAAPDLHSRRQLRALPNGPDAQTEKRRGVVLAACVNSGSAIRTETQISYAPTLRGLLVLAERS
RQQPEATIRDAHDHTVSGTGIYLAVQTMTDRNSRWIYFRLIGDVPAETAPVNFHTYPLNTSPDDRHIHSAISQSARQRAG
VTPRGKTHRRPAVQAGETRQALPQICPRFALQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21366; Mature: 21366

Theoretical pI: Translated: 11.67; Mature: 11.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVCCNRRQIGHPRQRGAAPDLHSRRQLRALPNGPDAQTEKRRGVVLAACVNSGSAIRT
CEEEECCCCCCCCCHHCCCCCCHHHHHHHHCCCCCCCCCCHHHCCEEEEEEECCCCEEEE
ETQISYAPTLRGLLVLAERSRQQPEATIRDAHDHTVSGTGIYLAVQTMTDRNSRWIYFRL
CCEEEHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEECCCEEEEEEEEEECCCCCEEEEEE
IGDVPAETAPVNFHTYPLNTSPDDRHIHSAISQSARQRAGVTPRGKTHRRPAVQAGETRQ
ECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
ALPQICPRFALQ
HHHHHHHHHCCC
>Mature Secondary Structure
MRVVCCNRRQIGHPRQRGAAPDLHSRRQLRALPNGPDAQTEKRRGVVLAACVNSGSAIRT
CEEEECCCCCCCCCHHCCCCCCHHHHHHHHCCCCCCCCCCHHHCCEEEEEEECCCCEEEE
ETQISYAPTLRGLLVLAERSRQQPEATIRDAHDHTVSGTGIYLAVQTMTDRNSRWIYFRL
CCEEEHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEECCCEEEEEEEEEECCCCCEEEEEE
IGDVPAETAPVNFHTYPLNTSPDDRHIHSAISQSARQRAGVTPRGKTHRRPAVQAGETRQ
ECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
ALPQICPRFALQ
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA